Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq210 154 3e-32 seq75 113 1e-19 seq31714 104 5e-17 seq30763 104 5e-17 seq507 104 5e-17 seq231 104 5e-17 seq34 104 5e-17 seq28 104 5e-17 seq8 104 5e-17 seq226 102 2e-16 seq79 102 2e-16 seq447 100 6e-16 seq24 100 6e-16 seq2 100 6e-16 seq375 98.7 2e-15 >seq210 Length=498004 Score = 154 bits (170), Expect = 3e-32 Identities = 577/889 (65%), Gaps = 18/889 (2%) Strand=Plus/Minus Query 229758 GTTCCCAATCCAATATCCCGATATGTGGGATATGTACAAGAAGGCGGTGGCAACTTTCTG 229817 |||||| |||| |||||| | ||||||| |||||||||||||| || || ||||||| Sbjct 322705 GTTCCCGATCCGGTATCCCCAGGTGTGGGAGATGTACAAGAAGGCCGTCGCCTCTTTCTG 322646 Query 229818 GACCACTGAGGAAGT--TCCTCTGAACGCAGACGTCGTCGACTGGCGTGAGAAACTCAAT 229875 ||| | ||||| || ||||| ||| ||| || | |||||| | | |||| Sbjct 322645 GACAGCCGAGGAGGTCGACCTCT--CCGCCGACCTCCCCCACTGGCTCCACACCCTCACC 322588 Query 229876 GACGACGAACGTCATTTCATCAAACACATCCTAGGTTTTTTCGCAGGCTCCGATGGTATT 229935 |||||| || || |||||| ||| |||| | || ||||| | ||| || ||||| Sbjct 322587 CCCGACGAGCGCCACTTCATCTCCCACGTCCTCGCCTTCTTCGCCGCCTCTGACGGTATC 322528 Query 229936 GTGATGGAAAATCT-GCAGACCAACTTTAGTGT-GGAAGTAACGGTTCCAGAGGCACGGC 229993 || | || || || || | || ||| | ||| || || | | | ||||| || Sbjct 322527 GTCCTCGAGAACCTAGCCG-CCCGCTTCA-TGTCCGACGTCCAGATCGCCGAGGCCCGCG 322470 Query 229994 AATTTTATGCTTACCAAACATTCAACGAATCTATCCATTCTGAACAATATGCTCTGCTTA 230053 ||||| | | ||| | | || |||| ||||| || || ||| |||| | Sbjct 322469 CCTTTTACGGCTTCCAGATAGCCATCGAAAACATCCACTCCGAGTTGTATTCTCTTTTGC 322410 Query 230054 TCGACGCGCTTATTTCCGACGAGCAAGAACGGAACGAGCTTTTTGATGCCATTGAAAACA 230113 | || | || ||| | ||| | || |||||| |||| | || | Sbjct 322409 TGGAATCCTACATCAAAGACCCTGACGAAAAGGACCGCCTTTTTCGTGCCGTCGAGACGG 322350 Query 230114 TCCCGGCGGTTCATAACAAGGCAAAGTGGGCTCAGAAATGGCTAGA-ACCTGGTAAATCG 230172 | |||||||| || ||||| ||||||| | ||| | | ||| | | || Sbjct 322349 TTCCGGCGGTGGCGAAGAAGGCCCAGTGGGCGCTCCGGTGGATCCAGTCCTCG-GACTCT 322291 Query 230173 TTTGCCGAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCGGGAGTTTC 230232 || || ||||| ||||| |||| | ||||||||| || | || ||||| ||| Sbjct 322290 TTCGCGGAGCGCCTCGTGGCCTTCGCCGCTGTTGAAGGGATCTTCTTCTCCGGCTCCTTC 322231 Query 230233 TGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAG 230292 ||| ||||||| ||||| ||| ||| | ||||| |||||| | | || |||||| Sbjct 322230 TGCTCCATCTTCTGGCTCAAGAAGCGAGGCCTCATGCCGGGCCTCACTTTCTCCAACGAG 322171 Query 230293 TTCATCAGTCGCGACGAGGGTCTCCATCAACAGTTCGGCGAGCTTATGTATTCAAAGCTC 230352 ||||| ||||||||||| ||||| | |||| | || | || || ||| Sbjct 322170 CTCATCTCCCGCGACGAGGGCCTCCACTGCGACTTCGCCTGCCTCCTCTACTCCCTCCTC 322111 Query 230353 CAGAACAAGCTACCATTCGA-GACGG--TCAAACAAATCATTACAGAAGCAGTTGAAAAC 230409 | |||||| || ||| ||| | |||| ||||| | || || || || | | Sbjct 322110 AACCGCAAGCTCCC---CGAGGACCGCATCAAGTCGATCATCGCCGACGCTGTCGACATC 322054 Query 230410 GAAAAGGAGTTCATTTGTGACGC-TATTCCATGTCGCCTTATTGGCATGAACGCTGAACT 230468 || | ||||||| | || ||||| | || || || ||| | || ||||| | || | Sbjct 322053 GAGAGGGAGTTCGTCTGCGACGCGTTGCCCGTGGCG-CTTGTGGGGATGAATGGGGATTT 321995 Query 230469 TATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAA 230528 ||| | || |||||||| ||||| || || || | || | || | || | || ||| Sbjct 321994 GATGAGCCAATACATCGAGTTCGTGGCGGATCGTCTCTTGGGGGCGTTGGGATGCGGGAA 321935 Query 230529 AGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGAC 230588 ||||| | ||| || || | | |||||||| || ||||| ||||||||||| Sbjct 321934 GTTGTACGGGGCAGCGAATCCGTTCGATTGGATGGAGCTGATATCGCTCCAAGGGAAGAC 321875 Query 230589 CAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG 230637 || || ||||| ||| | ||| | ||||| |||| | | | |||||| Sbjct 321874 TAATTTTTTCGAGAAGAGGGTCGGGGACTACCAGAAGGCGGCGGTGATG 321826 >seq75 Length=1071363 Score = 113 bits (124), Expect = 1e-19 Identities = 77/86 (90%), Gaps = 2/86 (2%) Strand=Plus/Plus Query 165696 GACTTAAAACGCTTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGG 165755 |||||| ||| ||||||||||||||||||||||||||||| || || |||| || |||| Sbjct 135566 GACTTATAAC--TTGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGG 135623 Query 165756 TCGTGGGTTCGAGCCCCACGATGGGC 165781 |||||||||||||||||||| ||||| Sbjct 135624 TCGTGGGTTCGAGCCCCACGGTGGGC 135649 >seq31714 Length=1030 Score = 104 bits (114), Expect = 5e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| || || |||| || |||||||||||||||||| Sbjct 336 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 395 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 396 CCCACGGTGGGC 407 >seq30763 Length=1053 Score = 104 bits (114), Expect = 5e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| || || |||| || |||||||||||||||||| Sbjct 343 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 402 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 403 CCCACGGTGGGC 414 >seq507 Length=203899 Score = 104 bits (114), Expect = 5e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| || || |||| || |||||||||||||||||| Sbjct 47559 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 47618 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 47619 CCCACGGTGGGC 47630 >seq231 Length=464193 Score = 104 bits (114), Expect = 5e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| || || |||| || |||||||||||||||||| Sbjct 182955 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 182896 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 182895 CCCACGGTGGGC 182884 >seq34 Length=1605203 Score = 104 bits (114), Expect = 5e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| || || |||| || |||||||||||||||||| Sbjct 370514 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 370573 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 370574 CCCACGGTGGGC 370585 >seq28 Length=1713734 Score = 104 bits (114), Expect = 5e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| || || |||| || |||||||||||||||||| Sbjct 1247377 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 1247318 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 1247317 CCCACGGTGGGC 1247306 >seq8 Length=2709044 Score = 104 bits (114), Expect = 5e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| || || |||| || |||||||||||||||||| Sbjct 1385673 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 1385614 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 1385613 CCCACGGTGGGC 1385602 >seq226 Length=477463 Score = 102 bits (112), Expect = 2e-16 Identities = 67/74 (91%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 165708 TTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGA 165767 |||||||||||||||||| |||||||||| || || |||| || |||||||||||||||| Sbjct 196473 TTGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGA 196414 Query 165768 GCCCCACGATGGGC 165781 |||||||| ||||| Sbjct 196413 GCCCCACGGTGGGC 196400 >seq79 Length=1054456 Score = 102 bits (112), Expect = 2e-16 Identities = 67/74 (91%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 165708 TTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGA 165767 |||||||||||||||||| |||||||||| || || |||| || |||||||||||||||| Sbjct 170168 TTGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGA 170227 Query 165768 GCCCCACGATGGGC 165781 |||||||| ||||| Sbjct 170228 GCCCCACGGTGGGC 170241 >seq447 Length=237168 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 ||||||||||||||||| |||||||||| || || |||| || ||||||||||||||||| Sbjct 233647 TGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 233588 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 233587 CCCCACGGTGGGC 233575 >seq24 Length=1871300 Score = 100 bits (110), Expect = 6e-16 Identities = 67/75 (89%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 165707 CTTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCG 165766 || ||||||||||||||| ||||||||||| || || |||| || ||||||||||||||| Sbjct 88052 CTAGCCCGTCTAGCTCAGCCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCG 87993 Query 165767 AGCCCCACGATGGGC 165781 ||||||||| ||||| Sbjct 87992 AGCCCCACGGTGGGC 87978 >seq2 Length=3709472 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 ||||||||||||||||| |||||||||| || || |||| || ||||||||||||||||| Sbjct 1615954 TGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 1616013 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 1616014 CCCCACGGTGGGC 1616026 >seq375 Length=295418 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 111658 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 111599 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 111598 CCCACGGTGGGC 111587 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1056735433981710