Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq129 131 1e-25 seq464 120 3e-22 seq27 114 1e-20 seq241 109 5e-19 seq13 107 2e-18 seq88 102 7e-17 seq1025 89.7 4e-13 seq121 86.0 5e-12 >seq129 Length=753513 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || |||| ||| |||| ||| | ||| ||||||||||||||||||||||||||| Sbjct 556228 CCACCCCGAAGCCGGAGGACCAAATGAAGAGTAGACTCCTTTTGAATGTTATAGTCCGCC 556287 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || | | |||||||||||||| || ||| | || || |||||||| ||| ||| Sbjct 556288 AGCGTGCGCCCATCCTCCAGCTGTTTACCAGCAAAGATGAGCCTCTGCTGATCCGGGGGA 556347 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| ||||| ||||| | | | || || | ||| | Sbjct 556348 ATGCCCTCCTTGTCCTGAATCTTAGCCTTCACATTATCAATCGTGTCGGAGCTCTCAACT 556407 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| || ||||||||||| || | || || ||||| || ||||| Sbjct 556408 TCCAGAGTGATGGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCAT 556454 Score = 98.7 bits (108), Expect = 8e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 || || | ||| | |||||| ||||| || ||||||||||| |||||||| | | ||| Sbjct 556015 AGGACAAGATGGAGAGTGGATTCCTTCTGGATGTTATAGTCTGCCAGGGTACGCCCATCC 556074 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 || ||||| || || ||| |||| || |||||||| || || | ||||| ||||| Sbjct 556075 TCAAGCTGCTTCCCAGCAAAAATGAGCCTCTGCTGATCAGGAGGGATCCCTTCTTTGTCT 556134 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 |||||| || || | ||| || || | |||| ||||| || |||||| Sbjct 556135 TGGATCTTGGCCTTGACATTATCGATGGTGTCTGAGCTCTCCACTTCCAGAGTGATGGTC 556194 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || || || | || || |||||||| ||||| Sbjct 556195 TTCCCAGTGAGGGTCTTCACAAATATCTGCAT 556226 >seq464 Length=225985 Score = 120 bits (132), Expect = 3e-22 Identities = 167/229 (73%), Gaps = 5/229 (2%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| |||| || | ||||||||||||||| |||||||| || || Sbjct 137822 CCTCCACGAAGGCGGAGAACCAGGTGGAGAGTGGACTCCTTTTGGATGTTATAATCGGCG 137881 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || ||||||| || || ||||| || | || || | |||||||||| ||| Sbjct 137882 AGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCC-GGGGG 137940 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTC-CG- 21126 | ||||||||| || |||||| || || | | ||| || | ||| |||| || Sbjct 137941 ATGCCTTCCTTATCCTGGATCTTGGCCTTGACGTTGTCGATCGTGT--CCGAGCTCTCGA 137998 Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| ||| || ||||||||||| | || ||||| || |||||||| Sbjct 137999 CCTCCAAGGTGATCGTCTTGCCGGTGAGGGTCTTGACGAAGATTTGCAT 138047 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | |||||||| ||| | ||||||||||| ||||| || ||||| || Sbjct 137594 CCACCGCGGAGGCGGAGCACCAGATGGAGGGTGGACTCCTTCTGAATATTGTAGTCGGCG 137653 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || | ||||||| ||||| || || || | || || |||||||||||| || Sbjct 137654 AGCGTCCTGCCGTCCTCAAGCTGCTTCCCGGCGAAGATCAGCCTCTGCTGGTCCGGCGGA 137713 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| |||||| ||||| | | | ||||| |||| | Sbjct 137714 ATCCCCTCCTTGTCCTGGATCTTCGCCTTCACATTATCAATGGTATCCGAACTCTCCACT 137773 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| || ||||| || || | || || |||||||||||||| Sbjct 137774 TCGAGGGTGATCGTCTTTCCCGTAAGGGTCTTCACAAATATTTGCAT 137820 >seq27 Length=1763170 Score = 114 bits (126), Expect = 1e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 20963 GAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTC 21022 ||| || | ||| | ||||| ||||| || || || ||||| || ||||| || |||| Sbjct 581109 GAGGACGAGATGGAGGGTGGATTCCTTCTGGATATTGTAGTCGGCAAGGGTGCGGCCGTC 581050 Query 21023 CTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTC 21082 ||| ||||| ||||| ||| | || || | ||||||||| ||| | ||| |||||||| Sbjct 581049 CTCGAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTC 580990 Query 21083 GGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGT 21142 |||||| || || | | ||| ||||| || |||| || | ||| ||||| Sbjct 580989 TTGAATCTTTGCCTTAACGTTGTCGATGGTATCGGAGGACTCCACCTCAAGGGTGATGGT 580930 Query 21143 CTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 ||||||||| | || ||||| || || ||||| Sbjct 580929 CTTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 580897 Score = 111 bits (122), Expect = 1e-19 Identities = 164/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | |||||||| ||| | |||||| ||||| |||||||| || |||||| Sbjct 581578 CCACCACGGAGGCGGAGCACCAGATGAAGAGTGGATTCCTTCTGAATGTTGTAATCCGCC 581519 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || | ||||||||||| || || ||| | || | | ||||||||| || Sbjct 581518 AGGGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAAACGCTGCTGGTCTGGAGGA 581459 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTC-CG- 21126 | || |||||||| || || ||||| | | | | |||| ||| |||| || Sbjct 581458 ATACCCTCCTTGTCCTGAATTTTGGCCTTCACATTGTCAATCGTAT--CCGAGCTCTCGA 581401 Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| |||||||| || || | ||||||||||| || ||||| Sbjct 581400 CCTCAAGGGTGATGGTCTTCCCAGTGAGGGTTTTGACAAAGATCTGCAT 581352 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| || | ||| | || || |||||||| ||||| |||||||| Sbjct 581350 CCACCACGGAGGCGGAGGACGAGATGGAGCGTAGATTCCTTTTGGATGTTGTAGTCCGCT 581291 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | ||| || | ||||| || || ||||| || | || || ||||||||||| ||| Sbjct 581290 AAGGTGCGGCCATCCTCGAGTTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCTGGGGGA 581231 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || ||||| || |||||| || || | | ||| || || | ||| Sbjct 581230 ATTCCCTCCTTATCCTGGATCTTAGCCTTGACATTGTCGATGGTGTCGGAGCTCTCGACC 581171 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| |||||||||||||||||| | || ||||| || || ||||| Sbjct 581170 TCCAGGGTAATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 581124 >seq241 Length=450715 Score = 109 bits (120), Expect = 5e-19 Identities = 140/193 (73%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 20983 ACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCAT 21042 ||||||| || || |||||||| || || || || ||||||| ||||| ||||| || Sbjct 239433 ACTCCTTCTGGATATTATAGTCGGCGAGCGTCCGGCCGTCCTCGAGCTGCTTGCCGGCGA 239374 Query 21043 AAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCT 21102 | ||||| | ||||||||| ||| | ||| |||||||| |||||| || || | Sbjct 239373 AGATAAGACGTTGCTGGTCCGGGGGGATGCCCTCCTTGTCTTGGATCTTGGCCTTGACGT 239314 Query 21103 GGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGA 21162 | ||| ||||| || ||| |||| |||||||||||||||||| | || || | Sbjct 239313 TGTCGATCGTATCCGAGGACTCGACCTCCAGGGTAATGGTCTTGCCGGTGAGGGTCTTCA 239254 Query 21163 CAAATATTTGCAT 21175 | || || ||||| Sbjct 239253 CGAAGATCTGCAT 239241 >seq13 Length=2550137 Score = 107 bits (118), Expect = 2e-18 Identities = 163/232 (70%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 20948 TCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGC 21007 ||| || || || | ||| || | ||| | ||||||||||| || ||||| ||||| || Sbjct 1356592 TCCACCGCGGAGGCGGAGGACGAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGC 1356651 Query 21008 CAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGG 21067 ||||| || |||| || |||||||| || || | || || | |||||||||| ||| Sbjct 1356652 GAGGGTGCGGCCGTCTTCGAGCTGTTTTCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGG 1356711 Query 21068 CACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGT 21127 | ||| |||||||| |||||| || || | | ||| || || || ||| Sbjct 1356712 GATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGAC 1356771 Query 21128 TTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTG 21179 || | ||| ||||||||||| || | || || || || || ||||| ||| Sbjct 1356772 CTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCATCTTG 1356823 >seq88 Length=981168 Score = 102 bits (112), Expect = 7e-17 Identities = 143/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||||||||| || ||||| ||||| || ||||| || ||||||| ||||| || || Sbjct 85032 GTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTTCCG 85091 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || | || || | |||||| ||| || | ||| |||||||| |||||| || Sbjct 85092 GCGAAGATGAGGCGCTGCTGATCCGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTG 85151 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | ||| || || | ||| || | ||| |||||||||||||| | || Sbjct 85152 ACGTTGTCGATCGTGTCCGAAGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTC 85211 Query 21159 TTGACAAATATTTGCATTTTG 21179 |||||||| || ||||| ||| Sbjct 85212 TTGACAAAGATCTGCATCTTG 85232 >seq1025 Length=71329 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| || | ||| | ||||||||||| || ||||| ||||| || Sbjct 8504 CCGCCGCGGAGGCGGAGGACGAGATGGAGGGTGGACTCCTTCTGTATGTTGTAGTCAGCG 8445 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || ||||||| ||||| || || || | || || | |||||||||| || Sbjct 8444 AGGGTCCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCCGGAGGG 8385 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| |||||| || || | | ||| || || | |||| Sbjct 8384 ATGCCCTCCTTGTCCTGGATCTTGGTCTTGACATTGTCGATGGTGTCGGAAGACTCCACC 8325 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| || ||||| || || | || || || || || ||||| Sbjct 8324 TCAAGGGTGATAGTCTTCCCCGTGAGGGTCTTCACGAAGATCTGCAT 8278 >seq121 Length=770561 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||| || || |||||||| || || || || || | ||||||||||| || || Sbjct 402789 GTGGATTCTTTCTGAATGTTGTAATCTGCAAGAGTGCAACCATCCTCCAGCTGCTTCCCA 402848 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 ||| |||| || | |||||| ||| || | ||| |||||||| |||||| ||| Sbjct 402849 GCAAAAATGAGGCGCTGCTGATCCGGGGATATGCCCTCCTTGTCCTGAATCTTTGCCTTC 402908 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | ||| ||| ||| |||| |||| ||||||||||| || || | || Sbjct 402909 ACATTATCGATAGTGTCAGAACTCTCCACCTCCAAAGTAATGGTCTTCCCTGTAAGAGTC 402968 Query 21159 TTGACAAATATTTGCAT 21175 || ||||| || ||||| Sbjct 402969 TTCACAAAGATCTGCAT 402985 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421845865907972