Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq1029 95.1 2e-14 seq40 95.1 2e-14 seq680 91.5 2e-13 >seq1029 Length=71094 Score = 95.1 bits (104), Expect = 2e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 146048 GTTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCT 146107 |||||||| ||||| ||||| |||| ||| | || || ||||| || || ||||| Sbjct 12244 GTTCCACCCCTAAGCCTTAAAACCAGATGCAGTGTTGACTCTTTTTGAATGTTGTAATCA 12303 Query 146108 GAAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGA 146167 | || |||| | ||| || || || ||||||||||||||||||||||| ||||| || Sbjct 12304 GCTAGGGTTCGACCATCTTCCAACTGCTTTCCAGCAAAAATCAATCTTTGTTGATCTGGG 12363 Query 146168 GGAATTCCTTCTTTATCTTG 146187 || || || || || || || Sbjct 12364 GGTATACCCTCCTTGTCCTG 12383 >seq40 Length=1536145 Score = 95.1 bits (104), Expect = 2e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 146048 GTTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCT 146107 |||||||| ||||| || || |||| || | ||| || ||||| ||||| ||||| Sbjct 682259 GTTCCACCCCTAAGCCTCAAAACCAGGTGAAGAGTCGACTCTTTTTGAATATTGTAATCA 682200 Query 146108 GAAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGA 146167 | ||||||| | ||| || || ||||| ||||||||||||| ||||||||||| || Sbjct 682199 GCTAGAGTTCGACCATCTTCCAACTGTTTCCCAGCAAAAATCAGCCTTTGCTGATCTGGG 682140 Query 146168 GGAATTCCTTCTTTATCTTG 146187 || || || || || || || Sbjct 682139 GGTATCCCCTCCTTGTCCTG 682120 >seq680 Length=135211 Score = 91.5 bits (100), Expect = 2e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 146048 GTTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCT 146107 |||||||| ||||||||||| |||| ||| | || || ||||| || || ||||| Sbjct 22626 GTTCCACCCCTAAGTCTTAAAACCAGATGCAGCGTTGACTCTTTTTGAATGTTGTAATCA 22567 Query 146108 GAAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGA 146167 | | |||| | ||| || || || |||||||| |||||||||||||| ||||| || Sbjct 22566 GCCAAGGTTCGACCATCCTCCAACTGCTTTCCAGCGAAAATCAATCTTTGTTGATCTGGG 22507 Query 146168 GGAATTCCTTCTTTATCTTG 146187 || || || || || || || Sbjct 22506 GGTATACCCTCCTTGTCCTG 22487 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 742779927376640