Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq88 127 1e-24 seq27 123 2e-23 seq241 122 6e-23 seq13 116 2e-21 seq1025 107 1e-18 seq129 104 2e-17 seq474 102 5e-17 seq121 86.0 4e-12 seq464 82.4 5e-11 >seq88 Length=981168 Score = 127 bits (140), Expect = 1e-24 Identities = 167/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 |||||||| || | || || ||||| | || || ||||| ||||||||||||| Sbjct 85002 CCGCCGCGGAGGCGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 85061 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGT-CGACGGG 34281 || ||| |||| || | |||||| || ||||| ||||| |||||||| | || |||| Sbjct 85062 AGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGGCGCTGCTGATCCGGCGGG 85121 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341 | || ||||||||| ||||| ||| | | | | |||| || | || ||||| Sbjct 85122 -ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAAGACTCGAC 85180 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || | |||||||| ||||||||||| || || ||||||||||||||| Sbjct 85181 CTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCATC 85229 >seq27 Length=1763170 Score = 123 bits (136), Expect = 2e-23 Identities = 143/193 (74%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257 ||| ||||| || |||||||||| || ||| |||| || | ||||||||| || || Sbjct 581088 TTCCTTCTGGATATTGTAGTCGGCAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCAAA 581029 Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317 || || ||||||||||| ||| | || ||||||||| |||||| ||| | | Sbjct 581028 GATCAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCTTGAATCTTTGCCTTAACGTT 580969 Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 | | || | ||||| || || || || | |||||||| |||||||||||||| || || Sbjct 580968 GTCGATGGTATCGGAGGACTCCACCTCAAGGGTGATGGTCTTGCCGGTGAGAGTCTTGAC 580909 Query 34378 AAAGATCTGCATC 34390 |||||||||||| Sbjct 580908 GAAGATCTGCATC 580896 Score = 104 bits (114), Expect = 2e-17 Identities = 153/215 (71%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 |||||||| || | ||| ||| ||||| |||||||| || | ||| ||| | || Sbjct 581563 AGCACCAGATGAAGAGTGGATTCCTTCTGAATGTTGTAATCCGCCAGGGTGCGGCCATCC 581504 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 |||| |||||| || || || || | ||||||||||| || | | ||||||||| Sbjct 581503 TCCAGCTGCTTACCAGCAAAGATCAAACGCTGCTGGTCTGGAGGAATACCCTCCTTGTC- 581445 Query 34298 GCTATCTTTTG--CTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGG 34355 || ||||| ||| | || | | |||| ||| | ||||| || | ||||||| Sbjct 581444 -CTGAATTTTGGCCTTCACATTGTCAATCGTATCCGAGCTCTCGACCTCAAGGGTGATGG 581386 Query 34356 TTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 | || || ||||| ||||| ||||||||||||||| Sbjct 581385 TCTTCCCAGTGAGGGTTTTGACAAAGATCTGCATC 581351 Score = 89.7 bits (98), Expect = 3e-13 Identities = 137/193 (71%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 34198 TTCTTTCTGTATGTTGTAGTCGGACA-GCTGACGGTCGTCGTCCAACTGCTTGCCTGCGA 34256 ||| || || ||||||||||| | | | || ||| | || || | |||||||| |||| Sbjct 581315 TTCCTTTTGGATGTTGTAGTCCGCTAAGGTG-CGGCCATCCTCGAGTTGCTTGCCGGCGA 581257 Query 34257 AAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGAT 34316 | || |||| ||||||||| ||| | | |||||| || ||||| ||| | || Sbjct 581256 AGATCAGCCTCTGCTGGTCTGGGGGAATTCCCTCCTTATCCTGGATCTTAGCCTTGACAT 581197 Query 34317 CGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCA 34376 | | || | |||| ||||| |||| || ||||| ||||||||||| || || | Sbjct 581196 TGTCGATGGTGTCGGAGCTCTCGACCTCCAGGGTAATGGTCTTGCCGGTGAGGGTCTTGA 581137 Query 34377 CAAAGATCTGCAT 34389 | ||||||||||| Sbjct 581136 CGAAGATCTGCAT 581124 >seq241 Length=450715 Score = 122 bits (134), Expect = 6e-23 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| || || ||||||| ||| ||| |||| || | ||||||||| ||||| Sbjct 239431 TCCTTCTGGATATTATAGTCGGCGAGCGTCCGGCCGTCCTCGAGCTGCTTGCCGGCGAAG 239372 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 || || || |||||||| ||| | || ||||||||| ||||| ||| | | | Sbjct 239371 ATAAGACGTTGCTGGTCCGGGGGGATGCCCTCCTTGTCTTGGATCTTGGCCTTGACGTTG 239312 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | |||| ||| | || ||||| |||| || ||||| ||||||||||| || ||||| Sbjct 239311 TCGATCGTATCCGAGGACTCGACCTCCAGGGTAATGGTCTTGCCGGTGAGGGTCTTCACG 239252 Query 34379 AAGATCTGCATC 34390 |||||||||||| Sbjct 239251 AAGATCTGCATC 239240 >seq13 Length=2550137 Score = 116 bits (128), Expect = 2e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| ||||||||||||| || ||| |||| || | ||| || || ||||| Sbjct 1356629 TCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCTTCGAGCTGTTTTCCGGCGAAG 1356688 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 ||||| ||||||||||| ||| | || ||||||||| ||||| ||| | | | Sbjct 1356689 ATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTG 1356748 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | |||| || | || ||||| || | |||||||| ||||| ||||| || ||||| Sbjct 1356749 TCGATCGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACG 1356808 Query 34379 AAGATCTGCATC 34390 |||||||||||| Sbjct 1356809 AAGATCTGCATC 1356820 >seq1025 Length=71329 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 |||||||| || | || || || || | || || ||||||||||||||||| | Sbjct 8504 CCGCCGCGGAGGCGGAGGACGAGATGGAGGGTGGACTCCTTCTGTATGTTGTAGTCAGCG 8445 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| |||| || | |||||| || ||||| ||||| ||||||||||| || Sbjct 8444 AGGGTCCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCCGGAGGG 8385 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||| | || | | || | |||| || || || Sbjct 8384 ATGCCCTCCTTGTCCTGGATCTTGGTCTTGACATTGTCGATGGTGTCGGAAGACTCCACC 8325 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | ||||| || || || ||||| || ||||| ||||||||||| Sbjct 8324 TCAAGGGTGATAGTCTTCCCCGTGAGGGTCTTCACGAAGATCTGCAT 8278 >seq129 Length=753513 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || |||| || |||| || | |||| || || || ||||| ||||| | | Sbjct 556228 CCACCCCGAAGCCGGAGGACCAAATGAAGAGTAGACTCCTTTTGAATGTTATAGTCCGCC 556287 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 ||| || | || |||| ||| || || || || ||||||| |||||| || ||| Sbjct 556288 AGCGTGCGCCCATCCTCCAGCTGTTTACCAGCAAAGATGAGCCTCTGCTGATCCGGGGGA 556347 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||| | || | |||| |||| || || Sbjct 556348 ATGCCCTCCTTGTCCTGAATCTTAGCCTTCACATTATCAATCGTGTCGGAGCTCTCAACT 556407 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| |||||||| ||||| ||||| || ||||||||||||||||| Sbjct 556408 TCCAGAGTGATGGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCAT 556454 Score = 98.7 bits (108), Expect = 6e-16 Identities = 141/195 (72%), Gaps = 9/195 (5%) Strand=Plus/Plus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 |||||||| |||||||| || | || ||| | || || | || ||||| || || Sbjct 556492 TCTTTCTGGATGTTGTAATCAGCCAAAGTGCGGCCATCCTCAAGTTGTTTGCCAGCAAAG 556551 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 ||||||| ||||||||| ||| | || ||||||||| ||||| ||| | || Sbjct 556552 ATGAGCCTCTGCTGGTCCGGGGGAATGCCCTCCTTGTCTTGAATCTTAGCCTTCACAT-- 556609 Query 34319 GCTATCGAATCG-GTCGAT---TCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTT 34374 |||| ||||| ||||| || || |||| |||||||| ||||| || || || || Sbjct 556610 --TATC-AATCGTGTCGAGCTCTCAACTTCCAGGGTGATGGTCTTGCCAGTAAGGGTCTT 556666 Query 34375 CACAAAGATCTGCAT 34389 ||||||||||||||| Sbjct 556667 CACAAAGATCTGCAT 556681 Score = 86.0 bits (94), Expect = 4e-12 Identities = 160/227 (70%), Gaps = 16/227 (7%) Strand=Plus/Plus Query 34172 AGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGG--ACAGCTGAC 34229 |||| ||| || ||||| | ||| |||||||| || |||||||| | | || || | Sbjct 556692 AGCCGCAGGACAAGGTGAAGAGTTGACTCTTTCTGGATATTGTAGTCAGCTAAAG-TG-C 556749 Query 34230 GGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCT 34289 | | || || | || ||||| || || ||||||| ||||||||| ||| | || || Sbjct 556750 GACCATCCTCAAGTTGTTTGCCGGCAAATATGAGCCTCTGCTGGTCAGGGGGAATGCCCT 556809 Query 34290 CCTTGTCGGCTATCTTTTG--CTTTAGATCGGCTATCGAATCGGTC---GAT-TCGACGT 34343 |||| || || ||||| ||| | || |||| | | ||| | | || || | Sbjct 556810 CCTTATC--CTGGATTTTGGCCTTAACAT----TATCAATTGTGTCCGAGCTCTCAACTT 556863 Query 34344 CCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 | | |||||||| ||||| |||||||| || ||||||||||||||| Sbjct 556864 CAAGGGTGATGGTCTTGCCTGTGAGAGTCTTAACAAAGATCTGCATC 556910 >seq474 Length=218880 Score = 102 bits (112), Expect = 5e-17 Identities = 152/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || || ||||| | |||| || ||||| |||||||| |||| || ||| |||| Sbjct 25090 AGGACGAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAATCGGCGAGGGTGCGGCCGTCC 25149 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC-GACGGGCACGCTCTCCTTGTC 34296 || | |||||| || ||||| ||||| ||||||||||| | |||| | || ||||||||| Sbjct 25150 TCGAGCTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCTGGCGGG-ATGCCCTCCTTGTC 25208 Query 34297 GGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGT 34356 ||||| ||| | | | | || | |||| || || || || | ||||| || Sbjct 25209 CTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGACTCCACCTCGAGGGTGATAGT 25268 Query 34357 TTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || || || || || ||||| ||||||||||| Sbjct 25269 CTTCCCCGTCAGGGTCTTCACGAAGATCTGCAT 25301 >seq121 Length=770561 Score = 86.0 bits (94), Expect = 4e-12 Identities = 138/196 (70%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257 ||||||||| |||||||| || | || | | || |||| |||||| || || || Sbjct 402794 TTCTTTCTGAATGTTGTAATCTGCAAGAGTGCAACCATCCTCCAGCTGCTTCCCAGCAAA 402853 Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317 |||||| |||||||| || || | || ||||||||| |||||| ||| | || Sbjct 402854 AATGAGGCGCTGCTGATCCGGGGATATGCCCTCCTTGTCCTGAATCTTTGCCTTCACAT- 402912 Query 34318 GGCTATCGAATCGGTC-GAT---TCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTT 34373 |||||| ||| || || || |||| || ||||| || || || ||||| | Sbjct 402913 ---TATCGATAGTGTCAGAACTCTCCACCTCCAAAGTAATGGTCTTCCCTGTAAGAGTCT 402969 Query 34374 TCACAAAGATCTGCAT 34389 |||||||||||||||| Sbjct 402970 TCACAAAGATCTGCAT 402985 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || | ||||| |||||||||||| | || ||| ||||| |||||||| || | | Sbjct 402987 CCACCCCTCAGCCGCAGCACCAGGTGAAGGGTGGATTCCTTCTGAATGTTGTAATCTGCC 403046 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 ||| || | || || | |||||| || || || || || |||||||| || || | Sbjct 403047 AGCGTGCGTGCATCTTCGAGCTGCTTTCCAGCAAAGATAAGACGCTGCTGATCCACAGAG 403106 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | ||||| || |||||| ||| | || | || | |||| || || Sbjct 403107 ATTCCTTCCTTATCCTGAATCTTTGCCTTGACATTATCGATGGTGTCGGAGCTCTCCACC 403166 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| ||||| || || || || | ||| || |||||||||||||| Sbjct 403167 TCCAAAGTGATCGTCTTCCCCGTCAAAGTCTTTACAAAGATCTGCAT 403213 >seq464 Length=225985 Score = 82.4 bits (90), Expect = 5e-11 Identities = 146/212 (69%), Gaps = 1/212 (0%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || |||||||| | ||| || || || ||||| || |||| || ||| |||| Sbjct 137837 AGAACCAGGTGGAGAGTGGACTCCTTTTGGATGTTATAATCGGCGAGGGTGCGGCCGTCC 137896 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | |||||||| ||||| || || ||||||||||| ||| | || ||||| || Sbjct 137897 TCGAGTTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTC-CGGGGGATGCCTTCCTTATCC 137955 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | | | | |||| || | ||||| |||| ||||| || Sbjct 137956 TGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGCTCTCGACCTCCAAGGTGATCGTC 138015 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 ||||||||||| || || || ||||| ||||| Sbjct 138016 TTGCCGGTGAGGGTCTTGACGAAGATTTGCAT 138047 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 322755756631520