Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq13 116 3e-21 seq464 111 1e-19 seq1025 107 2e-18 seq88 105 5e-18 seq121 102 6e-17 seq27 102 6e-17 seq129 91.5 1e-13 seq680 84.2 2e-11 >seq13 Length=2550137 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45134 TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGT 45193 || || ||| ||||||||| |||||||||||| || ||| |||| || || ||| Sbjct 1356617 TGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCTTCGAGCTGT 1356676 Query 45194 TTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTT 45253 ||||||||||| || | ||||| ||||| || || | |||||||||||| || || Sbjct 1356677 TTTCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTG 1356736 Query 45254 TGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTC 45313 ||| || | | ||||| ||| ||||| | ||| || ||||||||||| Sbjct 1356737 GCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTG 1356796 Query 45314 AGAGTCTTCACAAAGATTTGCATGTTGCC 45342 || |||||||| ||||| ||||| ||||| Sbjct 1356797 AGGGTCTTCACGAAGATCTGCATCTTGCC 1356825 >seq464 Length=225985 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| || || ||| |||||||||||| ||||||||| || | |||| || Sbjct 137612 ACCAGATGGAGGGTGGACTCCTTCTGAATATTGTAGTCGGCGAGCGTCCTGCCGTCCTCA 137671 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || |||||||| |||| || ||| ||||| || || | |||||||||||| Sbjct 137672 AGCTGCTTCCCGGCGAAGATCAGCCTCTGCTGGTCCGGCGGAATCCCCTCCTTGTCCTGG 137731 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | | ||| || |||||| || | ||| |||||||| Sbjct 137732 ATCTTCGCCTTCACATTATCAATGGTATCCGAACTCTCCACTTCGAGGGTGATCGTCTTT 137791 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 ||||| || ||||||||||| |||||||| Sbjct 137792 CCCGTAAGGGTCTTCACAAATATTTGCAT 137820 Score = 100 bits (110), Expect = 2e-16 Identities = 149/210 (71%), Gaps = 1/210 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| ||| || ||| |||||| || ||||| || ||| || ||| |||| || Sbjct 137840 ACCAGGTGGAGAGTGGACTCCTTTTGGATGTTATAATCGGCGAGGGTGCGGCCGTCCTCG 137899 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 ||||| || |||||||| |||| ||||| ||||| || || | || ||||| ||| Sbjct 137900 AGTTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGG-ATGCCTTCCTTATCCTGG 137958 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | ||||| | ||| ||||||| ||| ||||||||| Sbjct 137959 ATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGCTCTCGACCTCCAAGGTGATCGTCTTG 138018 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 || || || ||||| || |||||||||||| Sbjct 138019 CCGGTGAGGGTCTTGACGAAGATTTGCATG 138048 >seq1025 Length=71329 Score = 107 bits (118), Expect = 2e-18 Identities = 148/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 45134 TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGT 45193 || || ||| ||||||||| ||||||||||| || || |||| || || || Sbjct 8480 TGGAGGGTGGACTCCTTCTGTATGTTGTAGTCAGCGAGGGTCCGGCCGTCCTCGAGCTGC 8421 Query 45194 TTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTT 45253 ||||||||||| || | ||||| ||||| ||||| | |||||||||||| || || Sbjct 8420 TTTCCGGCGAAGATGAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTG 8361 Query 45254 TGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTC 45313 ||| || | | | |||| | ||||||||| | ||| || ||||| ||||| Sbjct 8360 GTCTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTCCCCGTG 8301 Query 45314 AGAGTCTTCACAAAGATTTGCATGTTG 45340 || |||||||| ||||| |||||| || Sbjct 8300 AGGGTCTTCACGAAGATCTGCATGGTG 8274 >seq88 Length=981168 Score = 105 bits (116), Expect = 5e-18 Identities = 148/208 (71%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| || ||| ||||||||| |||||||||||| || ||| |||| || || || Sbjct 85025 GTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTG 85084 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 ||||||||||| || | ||||| || || || || | |||||||||||| || || Sbjct 85085 CTTTCCGGCGAAGATGAGGCGCTGCTGATCCGGCGGGATGCCCTCCTTGTCCTGGATCTT 85144 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | ||||| | ||| ||||| | ||| || |||||||| || Sbjct 85145 GGCCTTGACGTTGTCGATCGTGTCCGAAGACTCGACCTCGAGGGTGATGGTCTTGCCGGT 85204 Query 45313 CAGAGTCTTCACAAAGATTTGCATGTTG 45340 || ||||| |||||||| ||||| ||| Sbjct 85205 GAGGGTCTTGACAAAGATCTGCATCTTG 85232 >seq121 Length=770561 Score = 102 bits (112), Expect = 6e-17 Identities = 164/236 (69%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 45109 GCCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTT 45168 |||||| |||| | | |||| ||| || ||| ||||||||||||||||| || Sbjct 402986 GCCACCCCTCAGCCGCAGCACCAGGTGAAGGGTGGATTCCTTCTGAATGTTGTAATCTGC 403045 Query 45169 CAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGG 45228 ||| ||| | || || || || ||||| || || || | ||||| || || || Sbjct 403046 CAGCGTGCGTGCATCTTCGAGCTGCTTTCCAGCAAAGATAAGACGCTGCTGATCCACAGA 403105 Query 45229 CACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCAC 45288 | || ||||| ||| ||| ||| ||| || | | | |||| | |||||| Sbjct 403106 GATTCCTTCCTTATCCTGAATCTTTGCCTTGACATTATCGATGGTGTCGGAGCTCTCCAC 403165 Query 45289 CTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATGTTGCCTC 45344 ||||| || |||||||| ||||||| |||||| |||||||| |||||| ||||| Sbjct 403166 CTCCAAAGTGATCGTCTTCCCCGTCAAAGTCTTTACAAAGATCTGCATGCCGCCTC 403221 Score = 102 bits (112), Expect = 6e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| |||||||||| |||||| || ||||||||||| ||| ||| | |||||| Sbjct 403461 ACCAGGTGCAGCGTGGACTCCTTTTGGATGTTGTAGTCTGCCAGGGTGCGGCCATCGTCC 403520 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || || || || |||| ||||| || || || || | ||||| || ||| | Sbjct 403521 AGCTGCTTCCCAGCAAAGATCAGGCGCTGCTGATCAGGTGGGATCCCCTCTTTATCCTGA 403580 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || || || | | | |||| | ||| ||||| | ||| || |||||| Sbjct 403581 ATCTTAGCTTTCACGTTATCAATGGTGTCTGAGCTCTCAACCTCAAGGGTGATTGTCTTG 403640 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || || |||||||||||||| ||||| Sbjct 403641 CCGGTGAGGGTCTTCACAAAGATCTGCAT 403669 Score = 95.1 bits (104), Expect = 1e-14 Identities = 144/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| || ||| || |||||||||||||| || || || | | || ||||| || Sbjct 402782 GTGAAGGGTGGATTCTTTCTGAATGTTGTAATCTGCAAGAGTGCAACCATCCTCCAGCTG 402841 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || || || || || | ||||| || || || | | |||||||||||| ||| || Sbjct 402842 CTTCCCAGCAAAAATGAGGCGCTGCTGATCCGGGGATATGCCCTCCTTGTCCTGAATCTT 402901 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 | ||| || | | |||| || ||||||||||| ||||| ||||| || || Sbjct 402902 TGCCTTCACATTATCGATAGTGTCAGAACTCTCCACCTCCAAAGTAATGGTCTTCCCTGT 402961 Query 45313 CAGAGTCTTCACAAAGATTTGCATG 45337 ||||||||||||||||| |||||| Sbjct 402962 AAGAGTCTTCACAAAGATCTGCATG 402986 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 45109 GCCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTT 45168 ||| ||||| |||| | |||| ||| || ||| ||||||||| |||||||| || Sbjct 403214 GCCGCCTCTTAATCGGAGGACCAGGTGGAGAGTGGACTCCTTCTGTATGTTGTAATCTGC 403273 Query 45169 CAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGG 45228 | | ||| | || || || || ||||| || || |||| ||||| ||||| || | Sbjct 403274 TAATGTGCGGCCATCCTCGAGCTGCTTTCCAGCAAAAATCAGGCGCTGCTGGTCAGGTGC 403333 Query 45229 CACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCAC 45288 | |||||||||||| || || || || | | | | |||| | ||| || Sbjct 403334 GATGCCCTCCTTGTCCTGGATCTTGGCTTTCACATTCTCAATGGTGTCTGAGCTCTCAAC 403393 Query 45289 CTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 ||| | || || ||||| || || || ||||| || ||||| |||||| Sbjct 403394 CTCAAGAGTGATGGTCTTCCCTGTAAGGGTCTTGACGAAGATCTGCATG 403442 >seq27 Length=1763170 Score = 102 bits (112), Expect = 6e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| || || ||| ||||||||||||||||| || ||| ||| | || ||| Sbjct 581560 ACCAGATGAAGAGTGGATTCCTTCTGAATGTTGTAATCCGCCAGGGTGCGGCCATCCTCC 581501 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || || || || ||||| ||||| ||||| ||||| | ||||||||||||| | Sbjct 581500 AGCTGCTTACCAGCAAAGATCAAACGCTGCTGGTCTGGAGGAATACCCTCCTTGTCCTGA 581441 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 ||||| ||| || | | | ||| | ||| ||||| | ||| || ||||| Sbjct 581440 ATTTTGGCCTTCACATTGTCAATCGTATCCGAGCTCTCGACCTCAAGGGTGATGGTCTTC 581381 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || || || || |||||||| ||||| Sbjct 581380 CCAGTGAGGGTTTTGACAAAGATCTGCAT 581352 Score = 98.7 bits (108), Expect = 8e-16 Identities = 139/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 45146 TCCTTCTGAATGTTGTAGT-CGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 ||||| || |||||||||| || | || | ||| | || || ||||| || |||||||| Sbjct 581314 TCCTTTTGGATGTTGTAGTCCGCTAAGGT-GCGGCCATCCTCGAGTTGCTTGCCGGCGAA 581256 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264 |||| || ||| ||||| || || | |||||||| ||| || || ||| || Sbjct 581255 GATCAGCCTCTGCTGGTCTGGGGGAATTCCCTCCTTATCCTGGATCTTAGCCTTGACATT 581196 Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324 | | | |||| | ||| ||||||| |||||| |||||||| || || ||||| || Sbjct 581195 GTCGATGGTGTCGGAGCTCTCGACCTCCAGGGTAATGGTCTTGCCGGTGAGGGTCTTGAC 581136 Query 45325 AAAGATTTGCATG 45337 ||||| |||||| Sbjct 581135 GAAGATCTGCATG 581123 Score = 96.9 bits (106), Expect = 3e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205 |||||||| || ||||||||| || ||| |||| || || || || ||||| || Sbjct 581087 TCCTTCTGGATATTGTAGTCGGCAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCAAAG 581028 Query 45206 ATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCC 45265 |||| ||||| ||||| || || | ||||||||||| ||| ||| |||||| Sbjct 581027 ATCAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCTTGAATCTTTGCCTTAACGTTG 580968 Query 45266 GCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACA 45325 | | | | || ||||||||| | ||| || |||||||| || |||||||| || Sbjct 580967 TCGATGGTATCGGAGGACTCCACCTCAAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACG 580908 Query 45326 AAGATTTGCAT 45336 ||||| ||||| Sbjct 580907 AAGATCTGCAT 580897 >seq129 Length=753513 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 ||||| || || || |||||| |||||||| ||||| ||| ||| | || ||| Sbjct 556246 ACCAAATGAAGAGTAGACTCCTTTTGAATGTTATAGTCCGCCAGCGTGCGCCCATCCTCC 556305 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || ||||| || || || || | || ||| || || || || | |||||||||||| | Sbjct 556306 AGCTGTTTACCAGCAAAGATGAGCCTCTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGA 556365 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | |||| | ||| || |||| || || |||||| Sbjct 556366 ATCTTAGCCTTCACATTATCAATCGTGTCGGAGCTCTCAACTTCCAGAGTGATGGTCTTG 556425 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 || || || |||||||||||||| |||||| Sbjct 556426 CCAGTGAGGGTCTTCACAAAGATCTGCATG 556455 >seq680 Length=135211 Score = 84.2 bits (92), Expect = 2e-11 Identities = 102/137 (74%), Gaps = 4/137 (3%) Strand=Plus/Minus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 ||||| || | |||||| |||| |||||||| ||| || ||||||||||| || | Sbjct 22623 CCACCCCTAAGTCTTAAAACCAGATGCAGCGTTGACTCTTTTTGAATGTTGTAATCAGCC 22564 Query 45170 A--GTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227 | ||| ||| | || |||| || ||||| ||||| ||||| | ||||| || || | Sbjct 22563 AAGGTT--CGACCATCCTCCAACTGCTTTCCAGCGAAAATCAATCTTTGTTGATCTGGGG 22506 Query 45228 GCACACCCTCCTTGTCC 45244 | | ||||||||||||| Sbjct 22505 GTATACCCTCCTTGTCC 22489 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 394688475331657