Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq33 120 4e-22 seq617 89.7 7e-13 seq652 86.0 8e-12 >seq33 Length=1606457 Score = 120 bits (132), Expect = 4e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 66216 CCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCA 66275 || || ||||| | || | ||| || | |||| |||| ||||||||||||| ||| ||| Sbjct 1148410 CCCCCTTGATCAACATAACGAGCAGTATCATTAAAAACCCTCAACATTGGAACAATGCCA 1148469 Query 66276 TTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGAT 66335 || ||||| ||||| ||||| |||||| || ||| ||||||||||||| | ||| Sbjct 1148470 TTAGATGTCCCATTTGTCCCACGGATATAACTACCAGTTGCACGAATATTGTGAGCAGAT 1148529 Query 66336 AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATG 66395 | || ||||| || || ||| || | || ||| ||||| |||||||| || Sbjct 1148530 ATGCCAATTCCTCCAGCAGATTTGCTTATAACAGCACATTCCTTTAAAGTATCATATATT 1148589 Query 66396 CCCTCTATACTATCATCCATCATG 66419 ||||| || |||||||| ||||| Sbjct 1148590 CCCTCAATGCTATCATCTTTCATG 1148613 >seq617 Length=160175 Score = 89.7 bits (98), Expect = 7e-13 Identities = 153/222 (69%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 66215 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 66274 ||| || ||||| | || | ||| || | |||| | || |||| ||| || | ||| || Sbjct 53369 TCCCCCTTGATCAACATAACGAGCAGTATCATTAAACACCCTCAGCATCGGCACAATGCC 53310 Query 66275 ATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGA 66334 ||| || || ||||| ||||| ||||| || || | ||||| |||||| || ||| Sbjct 53309 ATTAGAAGTTCCATTTGTCCCACGAATATAACTACCCGTGGCACGTATATTATGAACTGA 53250 Query 66335 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 66394 | ||| ||||| || || || || | || ||| || | || |||||||| Sbjct 53249 AACACCAATTCCTCCAGCAGACTTGCTTATAACAGCACATTCCTTCAGAGTGTCATAGAT 53190 Query 66395 GCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCT 66436 ||||| ||||||||||| ||||| | || |||||||| Sbjct 53189 TCCCTCAATACTATCATCTTTCATGCAGACAAGGAAACAGCT 53148 >seq652 Length=146776 Score = 86.0 bits (94), Expect = 8e-12 Identities = 142/205 (69%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 66215 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 66274 ||| || ||||| | || | ||| || |||||| | || | |||||| |||| ||| || Sbjct 110491 TCCCCCTTGATCAACATAACGAGCAGTATTATTAAACACCCGCAACATCGGAACAATGCC 110432 Query 66275 ATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGA 66334 ||| || || ||||| ||||| ||||| || || | ||||| || ||| || ||| Sbjct 110431 ATTAGAAGTTCCATTTGTCCCACGAATATAACTACCTGTAGCACGTATGTTATGAACTGA 110372 Query 66335 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 66394 | ||| ||||| || || || || | || ||| | | || |||||||| Sbjct 110371 AACACCAATTCCTCCAGCAGACTTGCTTATGACAGCACATTCCATCAGAGTGTCATAGAT 110312 Query 66395 GCCCTCTATACTATCATCCATCATG 66419 ||||| ||||||||||| ||||| Sbjct 110311 TCCCTCAATACTATCATCTTTCATG 110287 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657512019190280