Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24]
80,317 sequences; 556,480,649 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq33 116 5e-21
seq617 86.0 8e-12
>seq33
Length=1606457
Score = 116 bits (128), Expect = 5e-21
Identities = 148/204 (73%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 72178 CCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCA 72237
|| || ||||| | || | ||| || | |||| |||| ||||||||||||| ||| |||
Sbjct 1148410 CCCCCTTGATCAACATAACGAGCAGTATCATTAAAAACCCTCAACATTGGAACAATGCCA 1148469
Query 72238 TTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGAT 72297
|| |||| ||||| ||||| |||||| || ||| | |||||||||||| | |||
Sbjct 1148470 TTAGATGTCCCATTTGTCCCACGGATATAACTACCAGTTGCACGAATATTGTGAGCAGAT 1148529
Query 72298 AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATG 72357
| || ||||| || || ||| || | || ||| ||||| |||||||| ||
Sbjct 1148530 ATGCCAATTCCTCCAGCAGATTTGCTTATAACAGCACATTCCTTTAAAGTATCATATATT 1148589
Query 72358 CCCTCTATACTATCATCCATCATG 72381
||||| || |||||||| |||||
Sbjct 1148590 CCCTCAATGCTATCATCTTTCATG 1148613
>seq617
Length=160175
Score = 86.0 bits (94), Expect = 8e-12
Identities = 152/222 (68%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 72177 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 72236
||| || ||||| | || | ||| || | |||| | || |||| ||| || | ||| ||
Sbjct 53369 TCCCCCTTGATCAACATAACGAGCAGTATCATTAAACACCCTCAGCATCGGCACAATGCC 53310
Query 72237 ATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGA 72296
||| || | ||||| ||||| ||||| || || ||||||| ||||| || |||
Sbjct 53309 ATTAGAAGTTCCATTTGTCCCACGAATATAACTACCCGTGGCACGTATATTATGAACTGA 53250
Query 72297 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 72356
| ||| ||||| || || || || | || ||| || | || ||||||||
Sbjct 53249 AACACCAATTCCTCCAGCAGACTTGCTTATAACAGCACATTCCTTCAGAGTGTCATAGAT 53190
Query 72357 GCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCT 72398
||||| ||||||||||| ||||| | || ||||||||
Sbjct 53189 TCCCTCAATACTATCATCTTTCATGCAGACAAGGAAACAGCT 53148
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 670465401410920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |