Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq33 116 5e-21 seq617 86.0 8e-12 >seq33 Length=1606457 Score = 116 bits (128), Expect = 5e-21 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 72178 CCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCA 72237 || || ||||| | || | ||| || | |||| |||| ||||||||||||| ||| ||| Sbjct 1148410 CCCCCTTGATCAACATAACGAGCAGTATCATTAAAAACCCTCAACATTGGAACAATGCCA 1148469 Query 72238 TTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGAT 72297 || |||| ||||| ||||| |||||| || ||| | |||||||||||| | ||| Sbjct 1148470 TTAGATGTCCCATTTGTCCCACGGATATAACTACCAGTTGCACGAATATTGTGAGCAGAT 1148529 Query 72298 AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATG 72357 | || ||||| || || ||| || | || ||| ||||| |||||||| || Sbjct 1148530 ATGCCAATTCCTCCAGCAGATTTGCTTATAACAGCACATTCCTTTAAAGTATCATATATT 1148589 Query 72358 CCCTCTATACTATCATCCATCATG 72381 ||||| || |||||||| ||||| Sbjct 1148590 CCCTCAATGCTATCATCTTTCATG 1148613 >seq617 Length=160175 Score = 86.0 bits (94), Expect = 8e-12 Identities = 152/222 (68%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 72177 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 72236 ||| || ||||| | || | ||| || | |||| | || |||| ||| || | ||| || Sbjct 53369 TCCCCCTTGATCAACATAACGAGCAGTATCATTAAACACCCTCAGCATCGGCACAATGCC 53310 Query 72237 ATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGA 72296 ||| || | ||||| ||||| ||||| || || ||||||| ||||| || ||| Sbjct 53309 ATTAGAAGTTCCATTTGTCCCACGAATATAACTACCCGTGGCACGTATATTATGAACTGA 53250 Query 72297 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 72356 | ||| ||||| || || || || | || ||| || | || |||||||| Sbjct 53249 AACACCAATTCCTCCAGCAGACTTGCTTATAACAGCACATTCCTTCAGAGTGTCATAGAT 53190 Query 72357 GCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCT 72398 ||||| ||||||||||| ||||| | || |||||||| Sbjct 53189 TCCCTCAATACTATCATCTTTCATGCAGACAAGGAAACAGCT 53148 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 670465401410920