Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq295 183 4e-41 seq210 116 5e-21 >seq295 Length=381392 Score = 183 bits (202), Expect = 4e-41 Identities = 386/561 (69%), Gaps = 21/561 (4%) Strand=Plus/Minus Query 125022 TGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTGTCC 125081 ||||| |||||||| ||||| | |||||||||||||| | ||| |||||||| || ||| Sbjct 145110 TGGGAGATGTACAAGAAGGCCCTCGCCTCCTTTTGGACCGCCGAGGAGGTCGACCTCTCC 145051 Query 125082 AAGGACCTGTACGATTGGGAGACTCGTTTGACTGA--AAC--TGAGCGAGAGTTTATATC 125137 | ||||| | | ||| ||| | || | ||| |||||| | || || || Sbjct 145050 AGTGACCTCCCCCACTGG----CTCCACTCCCTCACCAACGATGAGCGCCACTTCATCTC 144995 Query 125138 GCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACG 125197 ||||| | |||||||| |||| ||||||||| |||||| ||| || || | || Sbjct 144994 CCACATCCTCGCCTTCTTCGCCGCCTCCGATGGCATCGTCCTCGAGAACCTCGCCATCCG 144935 Query 125198 ATTC-TCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTT-TACGGATTCCAAATCATG 125255 ||| | || || | ||||| |||| || || || ||||| ||||| ||| | Sbjct 144934 CTTCATGTCCGACGTCCAG-ATTCCCGAGGCC-CGCGCCTTCTACGGCTTCCAGATCGCG 144877 Query 125256 ATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCCG 125315 || |||||| | ||||| || |||||||| || | || ||||| ||||| Sbjct 144876 ATCGAGAACATCCACTCCGAGATGTACTCCCTCCTCCTCGAATCCTACATCAAGGATCCA 144817 Query 125316 CAACGTAAACACATGCTCTTTAACGCAA--TCGACACGGTGCCGTCTATACGTAAAAAGG 125373 | || ||| | || |||| ||| |||| || || ||| | | || |||| Sbjct 144816 GA-CGAAAA-AGATCGCCTTTTCCGCGCCGTCGAGACCGTCCCGGCAGTGACCAAGAAGG 144759 Query 125374 CTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGG 125433 | || |||| |||||||||||| || | | || | |||||| | || || | Sbjct 144758 CCCAGTGGGCCCTTCGGTGGATCGGGTCCGCCGAATCCTT---CGCCGAGCGTCTAGTTG 144702 Query 125434 CATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGG-TAGTTTTGCGGCCATCTTTTGGCTC 125492 | || |||||||| ||||| |||||||| || || | || ||| | ||||| |||||| Sbjct 144701 CGTTTGCCGCCGTTGAGGGGATCTTCTTCTCCGGCTCCTTCTGCT-CTATCTTCTGGCTC 144643 Query 125493 AAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAG 125552 ||||||||||| |||||||| || || || | |||||| | || || || |||||| Sbjct 144642 AAGAAGCGCGGCCTCATGCCGGGTCTCACCTTCTCCAACGAGCTCATCTCCCGCGACGAG 144583 Query 125553 GGCCTACACTGTGACTTTGCC 125573 ||||| ||||| ||||| ||| Sbjct 144582 GGCCTCCACTGCGACTTCGCC 144562 >seq210 Length=498004 Score = 116 bits (128), Expect = 5e-21 Identities = 384/583 (66%), Gaps = 13/583 (2%) Strand=Plus/Minus Query 124996 TGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTT 125055 |||| || ||| |||||| | | ||||| |||||||| ||||| ||||| || | Sbjct 322706 TGTTCCCGATCCGGTATCCCCAGGTGTGGGAGATGTACAAGAAGGCCGTCGCCTCTTTCT 322647 Query 125056 GGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAG-ACTCGTTTGACT 125114 |||| | ||| |||||||| || ||| ||||| | | ||| || | | | Sbjct 322646 GGACAGCCGAGGAGGTCGACCTCTCCGCCGACCTCCCCCACTGGCTCCACACCCTCACCC 322587 Query 125115 GAAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATC 125174 || ||||| | || || || ||| | | |||||||| |||| ||| || || ||| Sbjct 322586 CCGAC-GAGCGCCACTTCATCTCCCACGTCCTCGCCTTCTTCGCCGCCTCTGACGGTATC 322528 Query 125175 GTCAACGACAATCTGTTGACACGATTC-TCTCAAGAGTTGACCATTCCAGAGGTGTCGTG 125233 ||| ||| || || | || ||| | || || | || | |||| || | Sbjct 322527 GTCCTCGAGAACCTAGCCGCCCGCTTCATGTCCGACGTCCAG-ATCGCCGAGGCC-CGCG 322470 Query 125234 C-TTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGA 125292 | |||||||| ||||| || || || ||| | ||||| || |||| ||| || Sbjct 322469 CCTTTTACGGCTTCCAGATAGCCATCGAAAACATCCACTCCGAGTTGTATTCTCTTTTGC 322410 Query 125293 TTGACATGTACATTCGCGATCCGCAACGTAAAC-ACATGCTCTTTAACGCAATCGACACG 125351 | || ||||| || || | || ||| || || ||| || |||| ||| Sbjct 322409 TGGAATCCTACATCAAAGACCCTGA-CGAAAAGGACCGCCTTTTTCGTGCCGTCGAGACG 322351 Query 125352 GTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCT 125411 || ||| | | || ||||| || |||| | | ||||||||| | | | ||| Sbjct 322350 GTTCCGGCGGTGGCGAAGAAGGCCCAGTGGGCGCTCCGGTGGATCCAGTCCTCGGACTCT 322291 Query 125412 TCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGG-TAG 125470 | ||| || | || ||||| |||||||| || || || |||||||| || || | Sbjct 322290 TT---CGCGGAGCGCCTCGTGGCCTTCGCCGCTGTTGAAGGGATCTTCTTCTCCGGCTCC 322234 Query 125471 TTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAA 125530 || ||| ||||||| |||||||||||||| || |||||||| || || || | || Sbjct 322233 TTCTGCT-CCATCTTCTGGCTCAAGAAGCGAGGCCTCATGCCGGGCCTCACTTTCTCCAA 322175 Query 125531 CGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCC 125573 |||| | || || || ||||||||||| ||||| ||||| ||| Sbjct 322174 CGAGCTCATCTCCCGCGACGAGGGCCTCCACTGCGACTTCGCC 322132 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740315204352920