Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= NC_004166.2 Length=44010 Score E Sequences producing significant alignments: (Bits) Value seq20449 318 2e-82 seq18183 129 2e-25 >seq20449 Length=1421 Score = 318 bits (352), Expect = 2e-82 Identities = 622/911 (68%), Gaps = 10/911 (1%) Strand=Plus/Plus Query 26659 ATAAAAAATTGGGTTGTCGATTGTAATTTAAAACATAATATCAGTTTTATCATCCCGGAC 26718 || ||||| ||||| || || | ||| || ||| ||| ||| ||| ||||| || Sbjct 3 ATTAAAAACTGGGTAGTAGACGGATGTTTGAATCATGGTATTAGTGCTATTATCCCTGAG 62 Query 26719 GCTATCGTTGAGGAAGGCGGGCGCGGCATGGCCGATGGAATTCGCGACGCTCTGCCGCCA 26778 | || ||| ||| | |||||||||||| ||||| || | || || || || || Sbjct 63 GTGATTTGTGAATCAGGAGAGCGCGGCATGGCGGATGGTATAAGGGATGCACTTCCCCCG 122 Query 26779 GAAAGAATCATTGATCTGAACATGAATGATGATGATTTTATCCCGCCTCTTGATTTGACG 26838 || | ||| || ||| | | | | ||||| | | || ||| | ||| |||| Sbjct 123 GATAAAATAATAGATATTGATTTAAGCGATGAAAACTACATTGTTCCTATGGATCTGACT 182 Query 26839 GAGGTAATTAGCAAACTTGGCCGAAATGGAGCCAGCCGTTTTGCTGACGAAATGATTGAC 26898 || ||||||| ||| | || || || ||||| || | ||||| || ||| | || || Sbjct 183 GAAGTAATTACCAAGTTAGGGCGCAAGGGAGCGAGTAGGTTTGCAGATGAAGTTATAGAT 242 Query 26899 TTCAT---ACAGCTTGATGGCCTTTCCCGGTCAGAAAAATATTTGACCGATGCGGCGAAA 26955 || | | | | || | |||| || | || || | || || || Sbjct 243 TTTTTTGGAGATATGGAGAAGATGGCCCGTTCTAAGCGTTACTTAAAAACAGCAGCTAAG 302 Query 26956 GCGTCAAGGGGTAGCTTGTTCAATATTAAACGGATCATCGAGGATGAAGATTACAGGGCG 27015 || ||| | ||| |||||||||||||| | ||| | ||||||||||| | | | | Sbjct 303 GCATCAGGTGGTTCTTTGTTCAATATTAAGAGAATCCTAGAGGATGAAGAGTTCCGTGTA 362 Query 27016 GACAGAATAGAAGAACTTTTGAACGAAGGTAATAACCGCCTTGCTAACGAGTTA-TTGCA 27074 | ||| ||| | || | | ||||| ||||| | | || | ||||| || || Sbjct 363 AGTATAATTGAACACCTAATTCAAGAAGGAAATAAGAGATTAGCAGAAGAGTTGCTTTCA 422 Query 27075 GTGGGGGGATAATGAGCAATTAGGTAGTAAATGTGACCCGATTTTGCACCGTTTAAACCG 27134 ||||| ||||| || |||| || ||| || | | || | | ||| | Sbjct 423 -TGGGGAACGAATGAAGAACTAGGAAGCAAAGCCGATGCAGTATTAAATAGATTAGATGA 481 Query 27135 TTTCTTTGGCAACGAACGCCTATATGACATATTCGCGCAAGACCCTCTTAAAGAGCTGGA 27194 ||||||||| ||||| | ||| ||| || || |||| || || |||||| |||| Sbjct 482 TTTCTTTGGTAACGATACCTTATTTGATATCTTTTCGCAGGATCCGAAAAAAGAGGTGGA 541 Query 27195 CTTCGCTAAGTGGATGCAAGAGGGTAAGGTAATTATTATCCGGGTTCCGAACGGAAGAGG 27254 || ||||| |||||||| ||||| || || ||||||| || | || ||| | | | Sbjct 542 TTTTGCTAAATGGATGCAGGAGGGGAAAGTTGTTATTATTCGCATACCAAACCGCAA--G 599 Query 27255 TCTTGGGGAATTGGCCGTAAAAACTCTTGTCCACTGGATAACACTGAAAACATTTATGAC 27314 | | || ||||| || ||||| |||||||||||||| ||| | |||||||||||||| Sbjct 600 T-TAGGTGAATTAGCATCTAAAACACTTGTCCACTGGATTACATTAAAAACATTTATGAC 658 Query 27315 CCGATTGCTCATGACGAAGGAAGAACAGAAAAACGGTTGTTTCATCGTTTTTAACGAGCC 27374 ||| ||||||||| ||||||||||| | || || ||||| || || ||||| ||||| Sbjct 659 ACGAATGCTCATGAGTAAGGAAGAACAAAGTAATGGCTGTTTTATGGTATTTAATGAGCC 718 Query 27375 GGAACAATACGAAAGTGAAGGATTGACAAAATTAATGGGGCGCATTGGTACAGAAGGGCG 27434 ||| ||||||| | || ||||| || ||| | ||||| || |||||||||||||| || Sbjct 719 GGAGCAATACGCTACAGAGGGATTAACTAAACTCATGGGTCGTATTGGTACAGAAGGTCG 778 Query 27435 CAAGGAACG-TTTGGGAAGTATTTATGCCTTCCATCACTGGAATAAGCTACAGCCGAGCC 27493 ||||||||| || ||| || | ||||| |||||||| ||||||||| ||| || Sbjct 779 CAAGGAACGATTCGGGGCGT-TATATGCGTTCCATCATTGGAATAAGTTACCGCACTCTT 837 Query 27494 TACAGGAGAATCTACAGGGCGGTGGGGTACAACAATTCCTCTTCATGAATGACCATACAA 27553 ||||||| ||| |||| |||||||| ||||||||| || | || || || || | | Sbjct 838 TACAGGAAAATTTACAAGGCGGTGGAGTACAACAAATCTTATTTTCAAACGATCACATTA 897 Query 27554 AAACTTTCGAA 27564 |||| |||||| Sbjct 898 AAACATTCGAA 908 >seq18183 Length=1556 Score = 129 bits (142), Expect = 2e-25 Identities = 382/582 (66%), Gaps = 24/582 (4%) Strand=Plus/Plus Query 25360 GAAACAATAAAATGGTCTGACTTCTTCCAATA----CAAAA-AGAATGAGTATGTGACAT 25414 ||||||||| ||||| || ||||| ||| ||||| | |||| || ||| | Sbjct 694 GAAACAATAGCTTGGTCGGATTTCTTTCAAGTTGAGCAAAACAAAATG-GT-TGTT---T 748 Query 25415 ATCGGATCATTCCTCATGCTGATGTGACGAATAACAATAAGCGGCTTTGGAAAGCGATTC 25474 | || || ||||||||| | |||| | |||||||| | ||| | ||||| || ||| Sbjct 749 ACCGTATTATTCCTCATAGTAATGTCTCCAATAACAACAGGCGCTTATGGAAGGCCATTT 808 Query 25475 ATAAAATGTATGAGCTGTACGATTCGCCATTCAGCCGCATAGAAAAGAGCGGTATGAAAT 25534 |||| |||||||| |||| || | ||| | || ||||| ||| ||| | | Sbjct 809 ATAAGATGTATGAAATGTATGAAGCACCAGGAACTCGTTTAGAAC---GCG--ATGGACT 863 Query 25535 TCACGT-------ACCGGGAGAAAGATTATTTTTGGTACGATATCATTTTCAGAATGAAA 25587 |||| | |||| || |||| ||||||| |||| | || || | | | Sbjct 864 --ACGTTTTGTTTATAGGGAAAAGGATTTATTTTGGTTCGATGTGATATTTAAACAAGAG 921 Query 25588 AACGGCCGTAAAAGTGTTGAGTTTTATGTATCCACAACCCGTTATCAGGCCGATAAACTC 25647 |||||| || | | ||||||||||||||||| | || || || || | Sbjct 922 GACGGCCAGAAGAAAATCGAGTTTTATGTATCCACTTCGGAATACCAAGCAACCAAGTTG 981 Query 25648 AAAAAGAAAATCGAAAATAAAGTACACGCCACTATAACAGAAGCAAGCGTGAAAGAGTTG 25707 ||| ||| | ||||| || | | ||| |||| |||||| | | | | | Sbjct 982 AAACGTAAATTAGAAAACAAGATGAGTGTCACAATAAAAGAAGCTGCCCTTGAGCAAATA 1041 Query 25708 GCCGTCCCTTTGGAGAATACAATTTTGCAGGAAATGAGATACCTGAAACACGATATTTTC 25767 || ||| || || || || | ||||| | | ||| || ||||||||||| || Sbjct 1042 CAAGTACCTGAAGAAAACACGATCATCCAGGAGTTAAAATATCTAAAACACGATATATTT 1101 Query 25768 ACGCTGAACACAAATTCCAATGACGTGAAAACACCTATTTCCAACTTGCTGAATGTGGTC 25827 | |||||||||| | ||||| ||| ||||||||| | | |||| | | Sbjct 1102 AGCTTGAACACAAACGCAAATGAGCAGAAGACACCTATTGCAGCAGTCATGAACACGATA 1161 Query 25828 GATGAATTACAAGACGATGGAGACTTTGCACGGTTCAGTGTGTGTAATGAATCAGAATCA 25887 || |||||||| |||||||||||||| ||||| ||||| || |||||| |||| Sbjct 1162 GACGAATTACAGTTTGATGGAGACTTTGCGCGGTTAAGTGTATGCAATGAAGCAGAGAAC 1221 Query 25888 CGTCAAAAATGGGTGAAGAACGCTCATTGGGCGTATGAGAAG 25929 ||||| || ||| | |||||||| |||||||||||| ||| Sbjct 1222 CGTCAGAAGTGGATAAAGAACGCATCTTGGGCGTATGAAAAG 1263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 140576195433288