Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24]
80,317 sequences; 556,480,649 total letters
Query= NC_005294.1
Length=42935
Score E
Sequences producing significant alignments: (Bits) Value
seq14923 150 5e-32
>seq14923
Length=1810
Score = 150 bits (166), Expect = 5e-32
Identities = 331/486 (68%), Gaps = 10/486 (2%)
Strand=Plus/Plus
Query 19944 TTTTTATATTTTCGGTGGTAAGGACGAGAGTTCACAGGATCTTATTCAAGGTTTAACGCT 20003
|||||||||||| |||||||| || || |||||||||||||| |||||| | || |
Sbjct 180 TTTTTATATTTTTGGTGGTAAAGATGAAGCGTCACAGGATCTTATCCAAGGTATTACTTT 239
Query 20004 GGCAGGTATCTTT-TTCGATGAAGTGGCGCTTATGCCTGAGTCCTTTGTTAACCAGGGCA 20062
||||| || ||| || |||||||| | ||||||| | || ||||||||||| | |
Sbjct 240 AGCAGG-ATGTTTCTTTGATGAAGTAGTGCTTATGGTTCGTTCATTTGTTAACCAAGCAA 298
Query 20063 CGGGGCGGTGCTCTGTGACAGGTTCCAAGTGGTGGTTTAACTGCAACCCAGACGGGCCTT 20122
| ||||| || ||||| |||||| || ||||||||||| ||||| | ||||| |
Sbjct 299 CTGGGCGTTGTTCTGTAGAAGGTTCAAAAGTCTGGTTTAACTGTAACCCTGGTGGGCCAT 358
Query 20123 ATCATTGGTTTAAAGTTAACTGGATAGACAAAGCGGAAACAAAGAATATGCTTTATCTGC 20182
| |||||||||||| | ||| |||| || ||| || |||||| | || | | |
Sbjct 359 ACCATTGGTTTAAAACAGAATGGCTAGATAAGGCGAAAGAAAAGAACTTACTACACATTC 418
Query 20183 ATTTTGATATGGACGACAACCTTTCTCTTTC-AGAGAACATCAAAAAGCGTTA-CAGAAG 20240
||| ||||| || ||| | || | || ||| || | ||| ||||||| | |||
Sbjct 419 GCTTTACGATGGATGATAACTTATCGTTGTCTAGAAAAAGTAAAACAGCGTTATTACAAG 478
Query 20241 -TCAATATCAAGGTGTTTTCTATCAGCGCTACATTCAAGGTCTTTGGACGGTGGCAGAAG 20299
| ||| | || ||||||| || | || ||| ||| |||||| | | || |
Sbjct 479 ATGTATAGC--GGCGTTTTCTTCAAGAGGTATATTTTAGGGCTTTGGGCAGCTGCTTCCG 536
Query 20300 GTATTGTCTATGATATGTTCAGTAAAGATAAGCATGTTGTATCAACCTTGCCAGAAATGA 20359
| || | | |||||||| | | ||||| ||| ||| | || | | || ||
Sbjct 537 GGCTTATATTCGATATGTTTGATGAGGATAAACATAAAGTACCTACGATAC--AAAGAGA 594
Query 20360 GTAAGCTGGGCAAATATGTTTCAGTCGACTACGGTACGCAAAATGCGACCGTTTTTCTTT 20419
||| | || | | | |||||| ||||| |||||||| || || | || | | ||
Sbjct 595 GTATGTTGAG-TACTTCGTTTCATGTGACTATGGTACGCAGAACGCTATGGTATATGGTT 653
Query 20420 TATGGG 20425
||||||
Sbjct 654 TATGGG 659
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 137139476382738
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |