Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq129 143 6e-29 seq121 132 1e-25 seq464 122 2e-22 seq27 113 1e-19 seq40 107 4e-18 seq1029 104 5e-17 seq363 104 5e-17 seq295 87.8 4e-12 seq241 87.8 4e-12 seq210 87.8 4e-12 >seq129 Length=753513 Score = 143 bits (158), Expect = 6e-29 Identities = 161/213 (76%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || ||||| | || ||||| ||||| || |||||||| | || || | || || Sbjct 556015 AGGACAAGATGGAGAGTGGATTCCTTCTGGATGTTATAGTCTGCCAGGGTACGCCCATCC 556074 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || || || || ||||||||||| |||||||| ||||||||||| || |||||||| || Sbjct 556075 TCAAGCTGCTTCCCAGCAAAAATGAGCCTCTGCTGATCAGGAGGGATCCCTTCTTTGTCT 556134 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGT 104526 || ||||| || || ||||| || | ||| || || | || || || || || || || Sbjct 556135 TGGATCTTGGCCTTGACATTATCGATGGTGTC-TGAGCTCTCCACTTCCAGAGTGATGGT 556193 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||| ||||| || || || |||||||||||||| Sbjct 556194 CTTCCCAGTGAGGGTCTTCACAAATATCTGCAT 556226 Score = 127 bits (140), Expect = 5e-24 Identities = 161/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 |||| || || | ||| | ||||| || || ||||| |||||||| | || || | Sbjct 556237 AGCCGGAGGACCAAATGAAGAGTAGACTCCTTTTGAATGTTATAGTCCGCCAGCGTGCGC 556296 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 || || || || ||||| |||||||| || |||||||| ||||| || || || || || Sbjct 556297 CCATCCTCCAGCTGTTTACCAGCAAAGATGAGCCTCTGCTGATCCGGGGGAATGCCCTCC 556356 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGT 104520 || ||||||||||| || || ||||| || | || ||| || | || || || || || Sbjct 556357 TTGTCCTGAATCTTAGCCTTCACATTATCAATCGTGTCG-GAGCTCTCAACTTCCAGAGT 556415 Query 104521 AATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| ||||| || || || ||||| |||||||| Sbjct 556416 GATGGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCAT 556454 >seq121 Length=770561 Score = 132 bits (146), Expect = 1e-25 Identities = 157/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || || || | || |||||||||||||| || || || | ||||| | ||| || Sbjct 402773 AAGGACAAGGTGAAGGGTGGATTCTTTCTGAATGTTGTAATCTGCAAGAGTGCAACCATC 402832 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || || || || ||||||||||| || | ||| ||||| || | ||| || || || || Sbjct 402833 CTCCAGCTGCTTCCCAGCAAAAATGAGGCGCTGCTGATCCGGGGATATGCCCTCCTTGTC 402892 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 |||||||||||| || ||||| || | || || | || ||||| | ||||| || Sbjct 402893 CTGAATCTTTGCCTTCACATTATCGATAGTGTCAGAACTCTCCACCTCCAAAGTAATGGT 402952 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||| || ||||| || || ||||| |||||||| Sbjct 402953 CTTCCCTGTAAGAGTCTTCACAAAGATCTGCAT 402985 Score = 125 bits (138), Expect = 2e-23 Identities = 168/231 (73%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || || || |||| || || || || | || ||||| |||||||| || || || Sbjct 402984 ATGCCACCCCTCAGCCGCAGCACCAGGTGAAGGGTGGATTCCTTCTGAATGTTGTAATCT 403043 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | || || | | ||||| || || ||||||||||| || || | ||| ||||| | Sbjct 403044 GCCAGCGTGCGTGCATCTTCGAGCTGCTTTCCAGCAAAGATAAGACGCTGCTGATCCACA 403103 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TC 104508 | |||||||| ||||||||||||||||| || ||||| || | ||| ||| || | || Sbjct 403104 GAGATTCCTTCCTTATCCTGAATCTTTGCCTTGACATTATCGATGGTGTCG-GAGCTCTC 403162 Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| | || || ||||| || || | || |||||||| |||||||| Sbjct 403163 CACCTCCAAAGTGATCGTCTTCCCCGTCAAAGTCTTTACAAAGATCTGCAT 403213 Score = 113 bits (124), Expect = 1e-19 Identities = 165/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || || || || | || || || || | || || || || || || || ||||| Sbjct 403440 ATGCCGCCCCTGAGGCGGAGAACCAGGTGCAGCGTGGACTCCTTTTGGATGTTGTAGTCT 403499 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | || || | || || || || || || |||||||| || || | ||| |||||||| Sbjct 403500 GCCAGGGTGCGGCCATCGTCCAGCTGCTTCCCAGCAAAGATCAGGCGCTGCTGATCAGGT 403559 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TC 104508 || || || ||||||||||||||||| ||||| || || || | ||| || || | || Sbjct 403560 GGGATCCCCTCTTTATCCTGAATCTTAGCTTTCACGTTATCAATGGTGTC-TGAGCTCTC 403618 Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| || || || ||||| || || || || || ||||| |||||||| Sbjct 403619 AACCTCAAGGGTGATTGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCAT 403669 Score = 107 bits (118), Expect = 4e-18 Identities = 164/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||||| | || || || || | || || || ||||| || || || || Sbjct 403212 ATGCCGCCTCTTAATCGGAGGACCAGGTGGAGAGTGGACTCCTTCTGTATGTTGTAATCT 403271 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | || || | || || || || || |||||||||||||| || | ||| || ||||| Sbjct 403272 GCTAATGTGCGGCCATCCTCGAGCTGCTTTCCAGCAAAAATCAGGCGCTGCTGGTCAGGT 403331 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TC 104508 | || || || || ||||| ||||| ||||| ||||| || | ||| || || | || Sbjct 403332 GCGATGCCCTCCTTGTCCTGGATCTTGGCTTTCACATTCTCAATGGTGTC-TGAGCTCTC 403390 Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| || || || ||||| || ||||| || || || || |||||||| Sbjct 403391 AACCTCAAGAGTGATGGTCTTCCCTGTAAGGGTCTTGACGAAGATCTGCAT 403441 >seq464 Length=225985 Score = 122 bits (134), Expect = 2e-22 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || ||||| | || || || ||||||||||| ||||| | || || || ||||| Sbjct 137609 AGCACCAGATGGAGGGTGGACTCCTTCTGAATATTGTAGTCGGCGAGCGTCCTGCCGTCC 137668 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || || || || || || || || |||||||| || || || || || || || || ||| Sbjct 137669 TCAAGCTGCTTCCCGGCGAAGATCAGCCTCTGCTGGTCCGGCGGAATCCCCTCCTTGTCC 137728 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527 || ||||| || || ||||| || | |||||| | || || || || || || ||| Sbjct 137729 TGGATCTTCGCCTTCACATTATCAATGGTATCCGAACTCTCCACTTCGAGGGTGATCGTC 137788 Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || ||||| || || |||||||| ||||| Sbjct 137789 TTTCCCGTAAGGGTCTTCACAAATATTTGCAT 137820 >seq27 Length=1763170 Score = 113 bits (124), Expect = 1e-19 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || ||||| | || ||||| ||||| ||||| ||||| | || || | ||||| Sbjct 581108 AGGACGAGATGGAGGGTGGATTCCTTCTGGATATTGTAGTCGGCAAGGGTGCGGCCGTCC 581049 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || || || || || ||||| || || | ||| || || || || || || || || || Sbjct 581048 TCGAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCT 580989 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527 ||||||||||| || || || || | ||||||| | || ||||| || || || ||| Sbjct 580988 TGAATCTTTGCCTTAACGTTGTCGATGGTATCGGAGGACTCCACCTCAAGGGTGATGGTC 580929 Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || || || || || || |||||||| Sbjct 580928 TTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 580897 >seq40 Length=1536145 Score = 107 bits (118), Expect = 4e-18 Identities = 109/142 (77%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 104328 TTATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGT 104387 || |||| || || ||||| | || || || | || || ||||| |||||||| || | Sbjct 682261 TTGTTCCACCCCTAAGCCTCAAAACCAGGTGAAGAGTCGACTCTTTTTGAATATTGTAAT 682202 Query 104388 CAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAG 104447 ||| |||||||| ||| ||||| | ||||| ||||||||||| ||||| || ||||| | Sbjct 682201 CAGCTAGAGTTCGACCATCTTCCAACTGTTTCCCAGCAAAAATCAGCCTTTGCTGATCTG 682142 Query 104448 GAGGTATTCCTTCTTTATCCTG 104469 | ||||| || || || ||||| Sbjct 682141 GGGGTATCCCCTCCTTGTCCTG 682120 >seq1029 Length=71094 Score = 104 bits (114), Expect = 5e-17 Identities = 108/142 (76%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 104328 TTATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGT 104387 || |||| || || ||||| | || ||||| | ||| || ||||| ||||| || || | Sbjct 12242 TTGTTCCACCCCTAAGCCTTAAAACCAGATGCAGTGTTGACTCTTTTTGAATGTTGTAAT 12301 Query 104388 CAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAG 104447 ||| ||| |||| ||| ||||| | || |||||||||||||| | || |||||||| | Sbjct 12302 CAGCTAGGGTTCGACCATCTTCCAACTGCTTTCCAGCAAAAATCAATCTTTGTTGATCTG 12361 Query 104448 GAGGTATTCCTTCTTTATCCTG 104469 | ||||| || || || ||||| Sbjct 12362 GGGGTATACCCTCCTTGTCCTG 12383 >seq363 Length=303632 Score = 104 bits (114), Expect = 5e-17 Identities = 108/142 (76%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 104328 TTATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGT 104387 || |||| || || ||||| | || || || | || || |||||||||||||| || | Sbjct 177748 TTGTTCCACCCCTAAGCCTCAAAACCAGGTGAAGAGTCGACTCTTTCTGAATATTGTAAT 177807 Query 104388 CAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAG 104447 ||| ||| |||| ||| ||||| | ||||| ||||||||||||| |||||| ||||| Sbjct 177808 CAGCTAGGGTTCGACCATCTTCCAACTGTTTCCCAGCAAAAATTAACCTCTGCTGATCCA 177867 Query 104448 GAGGTATTCCTTCTTTATCCTG 104469 ||||| || || || ||||| Sbjct 177868 AGGGTATCCCCTCCTTGTCCTG 177889 >seq295 Length=381392 Score = 87.8 bits (96), Expect = 4e-12 Identities = 108/148 (73%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 269136 TAGTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTT 269195 ||||||| |||||||| || || || || ||||| || || || || | ||||||| | Sbjct 144707 TAGTTGCGTTTGCCGCCGTTGAGGGGATCTTCTTCTCCGGCTCCTTCTGCTCTATCTTCT 144648 Query 269196 GGTTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGG 269255 || | ||||| | ||||| ||||| || | || ||||| ||||| | || | | | Sbjct 144647 GGCTCAAGAAGCGCGGCCTCATGCCGGGTCTCACCTTCTCCAACGAGCTCATCTCCCGCG 144588 Query 269256 ACGAAGGTTTACACTGCGACTTCGCTTG 269283 |||| || | |||||||||||||| || Sbjct 144587 ACGAGGGCCTCCACTGCGACTTCGCCTG 144560 >seq241 Length=450715 Score = 87.8 bits (96), Expect = 4e-12 Identities = 136/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428 || ||||| ||||||||||| | || || | ||||| || || || || || || || Sbjct 239431 TCCTTCTGGATATTATAGTCGGCGAGCGTCCGGCCGTCCTCGAGCTGCTTGCCGGCGAAG 239372 Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488 || || | || || || || || || || || || || || ||||| || || || || Sbjct 239371 ATAAGACGTTGCTGGTCCGGGGGGATGCCCTCCTTGTCTTGGATCTTGGCCTTGACGTTG 239312 Query 104489 TCTACGGTATCGCTAGG-TTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTAC 104547 || | ||||| | ||| || ||||| || ||||| ||||| || || || || || || Sbjct 239311 TCGATCGTATC-CGAGGACTCGACCTCCAGGGTAATGGTCTTGCCGGTGAGGGTCTTCAC 239253 Query 104548 AAATATCTGCAT 104559 || |||||||| Sbjct 239252 GAAGATCTGCAT 239241 >seq210 Length=498004 Score = 87.8 bits (96), Expect = 4e-12 Identities = 107/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 269138 GTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGG 269197 || || || |||||||| ||||| || ||||| || || || || | | ||||| ||| Sbjct 322275 GTGGCCTTCGCCGCTGTTGAAGGGATCTTCTTCTCCGGCTCCTTCTGCTCCATCTTCTGG 322216 Query 269198 TTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGAC 269257 | ||||| ||||||| ||||| || | |||||||| ||||| | || | | ||| Sbjct 322215 CTCAAGAAGCGAGGCCTCATGCCGGGCCTCACTTTCTCCAACGAGCTCATCTCCCGCGAC 322156 Query 269258 GAAGGTTTACACTGCGACTTCGCTTG 269283 || || | |||||||||||||| || Sbjct 322155 GAGGGCCTCCACTGCGACTTCGCCTG 322130 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1150213540163436