Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq27 136 4e-27 seq129 123 2e-23 seq121 102 7e-17 seq474 100 3e-16 seq88 91.5 1e-13 seq13 91.5 1e-13 seq241 82.4 7e-11 >seq27 Length=1763170 Score = 136 bits (150), Expect = 4e-27 Identities = 156/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 ||||| || | ||| |||||||| || | ||| ||||| || ||| | |||||| Sbjct 581561 CACCAGATGAAGAGTGGATTCCTTCTGAATGTTGTAATCCGCCAGGGTGCGGCCATCCTC 581502 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 |||||| || || ||||||| || | ||||| |||||||||||||| || ||||| | Sbjct 581501 CAGCTGCTTACCAGCAAAGATCAAACGCTGCTGGTCTGGAGGAATACCCTCCTTGTCCTG 581442 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 |||||| ||||| || | | | || || | | ||||| |||| |||||||| || Sbjct 581441 AATTTTGGCCTTCACATTGTCAATCGTATCCGAGCTCTCGACCTCAAGGGTGATGGTCTT 581382 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| || ||||| |||||||||||||| Sbjct 581381 CCCAGTGAGGGTTTTGACAAAGATCTGCAT 581352 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/200 (72%), Gaps = 2/200 (1%) Strand=Plus/Minus Query 94811 GTAGATTCCTTTTGCACGTTATAATC-GCTCATAGTGTTGGAATCCTCCAGCTGTTTTCC 94869 |||||||||||||| | ||| || || ||| | ||| | |||||| || || || || Sbjct 581320 GTAGATTCCTTTTGGATGTTGTAGTCCGCTAAG-GTGCGGCCATCCTCGAGTTGCTTGCC 581262 Query 94870 GCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTT 94929 | | ||||| | || ||||| ||||| ||||| || || || || | || || ||||| Sbjct 581261 GGCGAAGATCAGCCTCTGCTGGTCTGGGGGAATTCCCTCCTTATCCTGGATCTTAGCCTT 581202 Query 94930 GACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGT 94989 ||| | ||| ||||| | | ||||| || | || ||||| || || || || || Sbjct 581201 GACATTGTCGATGGTGTCGGAGCTCTCGACCTCCAGGGTAATGGTCTTGCCGGTGAGGGT 581142 Query 94990 TTTCACAAAGATCTGCATGC 95009 || || ||||||||||||| Sbjct 581141 CTTGACGAAGATCTGCATGC 581122 Score = 95.1 bits (104), Expect = 1e-14 Identities = 114/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||| ||||| || ||| ||||||| | | ||||| ||||| || || || || ||| Sbjct 581051 TCCTCGAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTG 580992 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | ||| |||||||| ||| | ||| || || | | || || |||| |||||| Sbjct 580991 TCTTGAATCTTTGCCTTAACGTTGTCGATGGTATCGGAGGACTCCACCTCAAGGGTGATG 580932 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || ||||| || || ||||||||||| Sbjct 580931 GTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 580897 >seq129 Length=753513 Score = 123 bits (136), Expect = 2e-23 Identities = 154/211 (73%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 ||||| || | |||||| |||||||| | |||||| || || ||| ||||||| Sbjct 556246 ACCAAATGAAGAGTAGACTCCTTTTGAATGTTATAGTCCGCCAGCGTGCGCCCATCCTCC 556305 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 |||||||| || ||||||| | || |||||||| || ||||| || || ||||| | | Sbjct 556306 AGCTGTTTACCAGCAAAGATGAGCCTCTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGA 556365 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 || || ||||| || | | ||||| | | || || || | |||||||| || Sbjct 556366 ATCTTAGCCTTCACATTATCAATCGTGTCGGAGCTCTCAACTTCCAGAGTGATGGTCTTG 556425 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 ||||| || || ||||||||||||||||||| Sbjct 556426 CCAGTGAGGGTCTTCACAAAGATCTGCATGC 556456 Score = 102 bits (112), Expect = 7e-17 Identities = 148/208 (71%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 94801 CAAG-TGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCA 94859 |||| || | ||| |||||||| || | |||||| || || || |||||| | Sbjct 556019 CAAGATGGAGAGTGGATTCCTTCTGGATGTTATAGTCTGCCAGGGTACGCCCATCCTCAA 556078 Query 94860 GCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAA 94919 |||| || || |||| || | || |||||||| ||||| || ||||||||||| | | Sbjct 556079 GCTGCTTCCCAGCAAAAATGAGCCTCTGCTGATCAGGAGGGATCCCTTCTTTGTCTTGGA 556138 Query 94920 TTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTC 94979 | || |||||||| ||| ||||| | | || || || | |||||||| || | Sbjct 556139 TCTTGGCCTTGACATTATCGATGGTGTCTGAGCTCTCCACTTCCAGAGTGATGGTCTTCC 556198 Query 94980 CAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||| || || |||||||| |||||||| Sbjct 556199 CAGTGAGGGTCTTCACAAATATCTGCAT 556226 Score = 95.1 bits (104), Expect = 1e-14 Identities = 140/197 (71%), Gaps = 1/197 (1%) Strand=Plus/Plus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCG 94870 || || || || || | ||| ||||| || |||| | |||||| || ||||| || Sbjct 556486 GTTGACTCTTTCTGGATGTTGTAATCAGCCAAAGTGCGGCCATCCTCAAGTTGTTTGCCA 556545 Query 94871 CCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTG 94930 ||||||| | || ||||| || || ||||| || || ||||| | ||| || ||||| Sbjct 556546 GCAAAGATGAGCCTCTGCTGGTCCGGGGGAATGCCCTCCTTGTCTTGAATCTTAGCCTTC 556605 Query 94931 ACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTT 94990 || | | ||||| | | || || || | |||||||| || |||||||| || Sbjct 556606 ACATTATCAATCGTGTC-GAGCTCTCAACTTCCAGGGTGATGGTCTTGCCAGTAAGGGTC 556664 Query 94991 TTCACAAAGATCTGCAT 95007 ||||||||||||||||| Sbjct 556665 TTCACAAAGATCTGCAT 556681 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 |||||| || ||||| ||| |||| || | || ||||| || || ||||| || || || Sbjct 556754 ATCCTCAAGTTGTTTGCCGGCAAATATGAGCCTCTGCTGGTCAGGGGGAATGCCCTCCTT 556813 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 || | ||||| ||||| || | | ||||| | | || || |||| ||||| Sbjct 556814 ATCCTGGATTTTGGCCTTAACATTATCAATTGTGTCCGAGCTCTCAACTTCAAGGGTGAT 556873 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||| || || || ||||| || |||||||||||||| Sbjct 556874 GGTCTTGCCTGTGAGAGTCTTAACAAAGATCTGCAT 556909 >seq121 Length=770561 Score = 102 bits (112), Expect = 7e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || || |||| |||| ||||| ||| | || |||||||| || | ||| ||||| | Sbjct 402987 CCACCCCTCAGCCGCAGCACCAGGTGAAGGGTGGATTCCTTCTGAATGTTGTAATCTGCC 403046 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| | ||| || ||||| ||||| ||||||| | | |||||||| || Sbjct 403047 AGCGTGCGTGCATCTTCGAGCTGCTTTCCAGCAAAGATAAGACGCTGCTGATCCACAGAG 403106 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || ||||| || || | ||| ||||||||||| ||| ||||| | | || || Sbjct 403107 ATTCCTTCCTTATCCTGAATCTTTGCCTTGACATTATCGATGGTGTCGGAGCTCTCCACC 403166 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || | ||||| || || || || | ||| || |||||||||||||||| Sbjct 403167 TCCAAAGTGATCGTCTTCCCCGTCAAAGTCTTTACAAAGATCTGCATGC 403215 Score = 98.7 bits (108), Expect = 9e-16 Identities = 141/199 (71%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCG 94870 || ||||| || || | ||| ||||| | |||| |||||||||||| || || Sbjct 402789 GTGGATTCTTTCTGAATGTTGTAATCTGCAAGAGTGCAACCATCCTCCAGCTGCTTCCCA 402848 Query 94871 CCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTG 94930 |||| || | | |||||||| || | || || || ||||| | ||| |||||||| Sbjct 402849 GCAAAAATGAGGCGCTGCTGATCCGGGGATATGCCCTCCTTGTCCTGAATCTTTGCCTTC 402908 Query 94931 ACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTT 94990 || ||| |||||||| || || || | || ||||| || || |||||||| Sbjct 402909 ACATTATCGATAGTGTCAGAACTCTCCACCTCCAAAGTAATGGTCTTCCCTGTAAGAGTC 402968 Query 94991 TTCACAAAGATCTGCATGC 95009 ||||||||||||||||||| Sbjct 402969 TTCACAAAGATCTGCATGC 402987 Score = 93.3 bits (102), Expect = 4e-14 Identities = 160/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATC-GCT 94839 || ||||| ||||| | |||| ||| | ||| || ||||| || | ||| ||||| ||| Sbjct 403215 CCGCCTCTTAATCGGAGGACCAGGTGGAGAGTGGACTCCTTCTGTATGTTGTAATCTGCT 403274 Query 94840 CATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGG 94899 || ||| | |||||| ||||| ||||| |||| || | | ||||| || || | Sbjct 403275 AAT-GTGCGGCCATCCTCGAGCTGCTTTCCAGCAAAAATCAGGCGCTGCTGGTCAGGTGC 403333 Query 94900 AATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGAC 94959 || || || ||||| | || || || || || | | ||||| | | || || Sbjct 403334 GATGCCCTCCTTGTCCTGGATCTTGGCTTTCACATTCTCAATGGTGTCTGAGCTCTCAAC 403393 Query 94960 GTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 |||| |||||||| || || ||||| || || || ||||||||||||| Sbjct 403394 CTCAAGAGTGATGGTCTTCCCTGTAAGGGTCTTGACGAAGATCTGCATGC 403443 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 |||| ||||| || || |||||||| | ||| || || || ||| | ||| ||| Sbjct 403461 ACCAGGTGCAGCGTGGACTCCTTTTGGATGTTGTAGTCTGCCAGGGTGCGGCCATCGTCC 403520 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 ||||| || || ||||||| | | |||||||| || || || || ||||| || | | Sbjct 403521 AGCTGCTTCCCAGCAAAGATCAGGCGCTGCTGATCAGGTGGGATCCCCTCTTTATCCTGA 403580 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 || || || || ||| | | ||||| | | || || |||| ||||| || || Sbjct 403581 ATCTTAGCTTTCACGTTATCAATGGTGTCTGAGCTCTCAACCTCAAGGGTGATTGTCTTG 403640 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || ||||||||||||||||| Sbjct 403641 CCGGTGAGGGTCTTCACAAAGATCTGCAT 403669 >seq474 Length=218880 Score = 100 bits (110), Expect = 3e-16 Identities = 145/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 94804 GTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTG 94863 ||| | |||||| ||||| || | ||| |||||| | ||| | ||||| ||||| Sbjct 25098 GTGGAGAGTAGACTCCTTCTGGATGTTGTAATCGGCGAGGGTGCGGCCGTCCTCGAGCTG 25157 Query 94864 TTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTT 94923 |||||| | ||||| | | ||||| ||||| || || || || ||||| | || || Sbjct 25158 CTTTCCGGCGAAGATGAGGCGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCCTGGATCTT 25217 Query 94924 TGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGT 94983 ||||||||| | ||| ||||| | | || || || | ||||| || || || || Sbjct 25218 GGCCTTGACGTTGTCGATGGTGTCGGAGGACTCCACCTCGAGGGTGATAGTCTTCCCCGT 25277 Query 94984 AAGAGTTTTCACAAAGATCTGCATG 95008 || || ||||| |||||||||||| Sbjct 25278 CAGGGTCTTCACGAAGATCTGCATG 25302 >seq88 Length=981168 Score = 91.5 bits (100), Expect = 1e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||| ||||| |||||| | ||||| | | |||||||| || || || || || ||| Sbjct 85074 TCCTCGAGCTGCTTTCCGGCGAAGATGAGGCGCTGCTGATCCGGCGGGATGCCCTCCTTG 85133 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | || || ||||||||| | ||| ||||| | ||||| || | |||||| Sbjct 85134 TCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAAGACTCGACCTCGAGGGTGATG 85193 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || || || || |||||||||||||| Sbjct 85194 GTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCAT 85228 >seq13 Length=2550137 Score = 91.5 bits (100), Expect = 1e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 || || |||||||||||| | ||||| | | ||||| || || || || || || ||| Sbjct 1356665 TCTTCGAGCTGTTTTCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTG 1356724 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | || || ||||||||| | ||| ||||| | | ||||| || | |||||| Sbjct 1356725 TCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGGGTGATG 1356784 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || || || ||||| ||||||||||| Sbjct 1356785 GTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCAT 1356819 >seq241 Length=450715 Score = 82.4 bits (90), Expect = 7e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||| ||||| || ||| | ||||| | | |||||| || || || || || || ||| Sbjct 239395 TCCTCGAGCTGCTTGCCGGCGAAGATAAGACGTTGCTGGTCCGGGGGGATGCCCTCCTTG 239336 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | || || ||||||||| | ||| || || | | ||||| || | || ||| Sbjct 239335 TCTTGGATCTTGGCCTTGACGTTGTCGATCGTATCCGAGGACTCGACCTCCAGGGTAATG 239276 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || || || ||||| ||||||||||| Sbjct 239275 GTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 239241 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447841132446120