Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq395 129 9e-26 seq15 129 9e-26 seq547 125 1e-24 seq7 125 1e-24 seq9 122 1e-23 seq97 120 5e-23 seq57 111 2e-20 seq4 111 2e-20 seq498 102 1e-17 >seq395 Length=276310 Score = 129 bits (142), Expect = 9e-26 Identities = 176/243 (72%), Gaps = 2/243 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| || |||| | || || || ||||||||||| || ||||| ||||| || || Sbjct 47040 GCGAAGCGGCACCGCAAGGTC-CTCCGCGATAACATCCAGGGCATCACTAAGCCCGCCAT 46982 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| || || || || || || || |||||||| || || | |||| || |||| Sbjct 46981 CCGCCGCCTCGCGCGCCGCGGCGGCGTCAAGCGCATCAGCGGTCTCATCTACGAGGAGAC 46922 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| ||| | || |||||||| ||| ||| |||| || || || ||| ||||| Sbjct 46921 CCGTGGTGTCCTCAAAGTCTTCCTCGAGAACGTCATCCGCGACGCCGTCACCTACACCGA 46862 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||||| || ||||| |||||| ||||||| | ||||| || |||| || || || Sbjct 46861 GCACGCTCGCCGGAAGACGGTCACCGCCATGGACGTTGTCTACGCTCTGAAGCGCCAGGG 46802 Query 16672 CCG 16674 || Sbjct 46801 TCG 46799 >seq15 Length=2364433 Score = 129 bits (142), Expect = 9e-26 Identities = 176/243 (72%), Gaps = 2/243 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| || |||| | || || || || |||||||| || ||||||||||| || || Sbjct 2312174 GCGAAGCGCCACCGCAAGGTC-CTCCGGGACAACATCCAGGGCATCACCAAGCCCGCCAT 2312116 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| ||||| || || || || ||||| ||||| || || | |||| || |||| Sbjct 2312115 CCGGCGTCTCGCACGGCGCGGCGGAGTGAAGCGCATCAGCGGCCTCATCTACGAGGAGAC 2312056 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 | | || | |||||||||||| ||| ||| |||| || || || ||| ||||| Sbjct 2312055 GAGAGGCGTCCTCAAGATCTTCCTCGAGAACGTCATCCGGGACGCCGTCACCTACACCGA 2311996 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || ||||| |||||| ||||||| ||||||| || | || || || || Sbjct 2311995 GCACGCCCGCCGGAAGACCGTCACCGCCATGGACGTCGTCTACGCCCTCAAGCGCCAGGG 2311936 Query 16672 CCG 16674 ||| Sbjct 2311935 CCG 2311933 Score = 120 bits (132), Expect = 5e-23 Identities = 174/243 (72%), Gaps = 2/243 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| |||| | || || || || |||||||| || ||||||||||| || || Sbjct 2291206 GCGAAGCGTCACCGCAAGGTC-CTCCGGGACAACATCCAGGGCATCACCAAGCCCGCCAT 2291264 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| ||||| || || ||||| ||||| ||||| || || | |||| || |||| Sbjct 2291265 CCGGCGTCTCGCACGGCGTGGCGGAGTGAAGCGCATCAGCGGCCTCATCTACGAGGAGAC 2291324 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 | | || | ||| ||||||| ||| ||| |||| || || || ||| ||||| Sbjct 2291325 GAGAGGCGTCCTCAAGGTCTTCCTTGAGAACGTCATCCGGGACGCCGTCACCTACACCGA 2291384 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || ||||| |||||| ||||||| | |||| || | || || || || Sbjct 2291385 GCACGCCCGCCGGAAGACCGTCACCGCCATGGACGTTGTCTGCGCTCTCAAGCGCCAGGG 2291444 Query 16672 CCG 16674 ||| Sbjct 2291445 CCG 2291447 >seq547 Length=191331 Score = 125 bits (138), Expect = 1e-24 Identities = 190/268 (71%), Gaps = 2/268 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| || |||| | || || || |||||||| || || ||||| ||||| || || Sbjct 129686 GCGAAGCGGCACCGCAAGGTC-CTCCGCGATAACATTCAGGGCATCACGAAGCCCGCCAT 129744 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| || ||||| || || || || |||||||| || || | |||| || |||| Sbjct 129745 CCGCCGCCTGGCCCGCCGCGGCGGCGTCAAGCGCATCAGCGGCCTCATCTACGAGGAGAC 129804 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | || | ||| |||| ||| ||| ||| |||| || || || ||||||||| Sbjct 129805 GCGCGGCGTCCTCAAGGTCTTTCTCGAGAACGTCATCCGCGACGCCGTCACCTATACCGA 129864 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || ||||| |||||| ||||||| |||| || || | || || || || Sbjct 129865 GCACGCCCGCCGGAAGACGGTCACCGCCATGGACGTCGTTTACGCCCTCAAGCGCCAGGG 129924 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699 ||| | | || ||||| || ||||| Sbjct 129925 CCGCACCCTCTACGGTTTCGGTGGTTAA 129952 Score = 125 bits (138), Expect = 1e-24 Identities = 175/243 (72%), Gaps = 2/243 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| || |||| | || ||||| |||||||| || || ||||| ||||| || || Sbjct 132901 GCGAAGCGGCACCGCAAGGTC-CTTCGCGATAACATTCAGGGCATCACGAAGCCCGCCAT 132959 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| || ||||| || || || || |||||||| || || | |||| || |||| Sbjct 132960 CCGCCGCCTGGCCCGCCGCGGCGGCGTCAAGCGCATCAGCGGCCTCATCTACGAGGAGAC 133019 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | || | ||| |||| ||| ||| ||| |||| || || || ||||||||| Sbjct 133020 GCGCGGCGTCCTCAAGGTCTTTCTCGAGAACGTCATCCGCGACGCCGTCACCTATACCGA 133079 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || ||||| |||||| ||||||| | ||||| || | || || || || Sbjct 133080 GCACGCCCGCCGGAAGACGGTCACCGCCATGGACGTGGTCTACGCCCTCAAGCGCCAGGG 133139 Query 16672 CCG 16674 ||| Sbjct 133140 CCG 133142 Score = 116 bits (128), Expect = 6e-22 Identities = 173/243 (71%), Gaps = 2/243 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||| | || |||| | || || || |||||||| || || || || ||||| || || Sbjct 167457 GCGAAGAGGCACCGCAAGGTC-CTCCGCGATAACATTCAGGGCATTACGAAGCCCGCCAT 167399 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 || || ||||| || || || || |||||||| || || | |||| || |||| Sbjct 167398 TCGCCGCCTGGCCCGCCGCGGCGGCGTCAAGCGCATCAGCGGCCTCATCTACGAGGAGAC 167339 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | || | ||| |||| ||| ||| ||| |||| || ||| || ||||||||| Sbjct 167338 GCGCGGCGTCCTCAAGGTCTTTCTCGAGAACGTCATCCGCGACGCTGTCACCTATACCGA 167279 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || ||||| |||||| ||||||| ||||||| || | || || || || Sbjct 167278 GCACGCCCGCCGGAAGACGGTCACCGCCATGGACGTCGTCTACGCCCTCAAGCGCCAGGG 167219 Query 16672 CCG 16674 ||| Sbjct 167218 CCG 167216 >seq7 Length=2862323 Score = 125 bits (138), Expect = 1e-24 Identities = 174/241 (72%), Gaps = 2/241 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| || |||| | || || || || || ||||| || ||||||||||| || || Sbjct 2137435 GCGAAGCGCCACCGCAAGGTC-CTCCGCGACAATATCCAGGGCATCACCAAGCCGGCGAT 2137493 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| || || || || || ||||| || ||||| || || | |||| ||||||| Sbjct 2137494 CCGCCGCCTCGCCCGCCGCGGTGGCGTGAAGCGGATCAGCGGCCTCATCTACGAAGAGAC 2137553 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | || | |||||||||||| ||| ||| |||| || || || ||| ||||| Sbjct 2137554 CCGGGGAGTCCTCAAGATCTTCCTCGAGAACGTCATCCGCGACGCCGTCACCTACACCGA 2137613 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || ||||| || ||| ||||||| ||||||| || | || || ||||| Sbjct 2137614 GCACGCCCGCCGGAAGACCGTTACCGCCATGGACGTCGTCTACGCCCTCAAGCGCCAAGG 2137673 Query 16672 C 16672 | Sbjct 2137674 C 2137674 >seq9 Length=2675258 Score = 122 bits (134), Expect = 1e-23 Identities = 185/261 (71%), Gaps = 2/261 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| || |||| | || || || || |||||||| || ||||||||||| || || Sbjct 1949091 GCGAAGCGCCACCGCAAGGTC-CTCCGCGACAACATCCAGGGCATCACCAAGCCGGCGAT 1949033 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| || || || || || || || || ||||| || ||| | |||| || |||| Sbjct 1949032 CCGCCGCCTCGCCCGCCGCGGCGGCGTGAAGCGGATCAGTGGCCTCATCTACGAGGAGAC 1948973 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | || | |||||||| ||| ||| ||| |||| || || || ||| || || Sbjct 1948972 CCGGGGAGTCCTCAAGATCTTTCTCGAGAACGTCATCCGCGACGCCGTCACCTACACTGA 1948913 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || ||||||||||| |||||||| | || || || | || || || || Sbjct 1948912 GCACGCCCGCCGGAAGACTGTCACGGCCATGGATGTTGTGTACGCCCTCAAGCGCCAGGG 1948853 Query 16672 CCGTAAGATTTATGGTTTTGG 16692 ||||| | ||||| || || Sbjct 1948852 CCGTACCCTCTATGGCTTCGG 1948832 >seq97 Length=909033 Score = 120 bits (132), Expect = 5e-23 Identities = 170/239 (71%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513 || || || || ||||| || ||||| ||||| || ||||| || ||||| || || || Sbjct 788776 CTCCGCGACAATATCCAGGGCATCACGAAGCCGGCCATCCGCCGCCTGGCCCGCCGCGGC 788835 Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573 || || ||||| || ||| | | || || |||| || | ||| | ||| |||| Sbjct 788836 GGCGTGAAGCGCATCAGTGGCCTCATTTACGAGGAGACCCGGGGAGTTCTCAAGGTCTTT 788895 Query 16574 CTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTC 16633 ||| ||| ||| |||| || || || ||| |||||||||||| || ||||| ||| Sbjct 788896 CTCGAGAACGTCATCCGCGACGCCGTCACCTACACCGAGCACGCTCGCCGCAAGACCGTC 788955 Query 16634 ACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692 ||| ||||||| | ||||| || | ||||| || ||||||| | ||||| || || Sbjct 788956 ACCGCCATGGACGTTGTCTACGCTCTCAAACGCCAGGGCCGTACTCTCTATGGCTTCGG 789014 >seq57 Length=1228887 Score = 111 bits (122), Expect = 2e-20 Identities = 172/243 (71%), Gaps = 2/243 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| || || | | || || || || |||||||| || ||||||||||| || || Sbjct 730634 GCGAAGCGCCACCGGAAGGTC-CTCCGGGACAACATCCAGGGCATCACCAAGCCTGCGAT 730576 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| |||||||| | ||||| || || ||||| || || | |||| || |||| Sbjct 730575 CCGGCGTCTGGCGAGGCGTGGCGGCGTGAAGCGCATCAGCGGTCTTATCTACGAGGAGAC 730516 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 | | || | ||| ||||||| ||| ||| |||| || || || ||| ||||| Sbjct 730515 GAGAGGCGTGCTCAAGGTCTTCCTGGAGAACGTCATCCGCGACGCCGTCACCTACACCGA 730456 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||| || ||||| |||||| ||||||| ||||||| || | || || || || Sbjct 730455 ACACGCCCGCCGGAAGACCGTCACCGCCATGGACGTCGTCTACGCCCTCAAGCGCCAGGG 730396 Query 16672 CCG 16674 ||| Sbjct 730395 CCG 730393 Score = 107 bits (118), Expect = 3e-19 Identities = 171/243 (70%), Gaps = 2/243 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| || || | | || || || || |||||||| || ||||| ||||| || || Sbjct 710749 GCGAAGCGCCACCGGAAGGTC-CTCCGGGACAACATCCAGGGCATCACGAAGCCCGCGAT 710807 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| || ||||| | ||||| || || ||||| || || | |||| || |||| Sbjct 710808 CCGGCGCCTGGCGAGGCGTGGCGGCGTGAAGCGCATCAGCGGTCTCATCTACGAGGAGAC 710867 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 | | || | ||| ||||||| ||| ||| |||| || || || ||| ||||| Sbjct 710868 GAGAGGCGTGCTCAAGGTCTTCCTGGAGAACGTCATCCGCGACGCCGTCACCTACACCGA 710927 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || ||||| |||||| ||||||| ||||||| || | || || || || Sbjct 710928 GCACGCCCGCCGGAAGACCGTCACCGCCATGGACGTCGTCTACGCCCTCAAGCGCCAGGG 710987 Query 16672 CCG 16674 ||| Sbjct 710988 CCG 710990 >seq4 Length=3300150 Score = 111 bits (122), Expect = 2e-20 Identities = 187/268 (70%), Gaps = 2/268 (1%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| ||||| || || | | || || || ||||||||||| || ||||| ||||| || | Sbjct 2049755 CGCGAAGCGGCACCGGAAGGTC-CTCCGGGATAACATCCAGGGGATCACGAAGCCGGCGA 2049813 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 |||| ||| |||| | | ||||| || ||||| || ||| ||| |||| || |||| Sbjct 2049814 TCCGGCGTTTGGCGAGGAGAGGTGGGGTGAAGCGGATCAGTGGCTTGATCTACGAGGAGA 2049873 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 | | ||| | ||| ||||| | ||| || |||| || || || ||| |||| Sbjct 2049874 CAAGGGGGGTTCTCAAGGTCTTCTTGGAGAATGTGATCCGGGACGCCGTCACCTACACCG 2049933 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 ||||||| || ||||| |||||| ||||||| | ||||| || | || | || | Sbjct 2049934 AGCACGCCCGTCGGAAGACCGTCACCGCCATGGACGTTGTCTACGCCCTCAAGAGGCAGG 2049993 Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTA 16698 |||| | | ||||| || || |||| Sbjct 2049994 GCCGGACTCTCTATGGATTCGGTGGTTA 2050021 >seq498 Length=209182 Score = 102 bits (112), Expect = 1e-17 Identities = 159/225 (71%), Gaps = 2/225 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| || || | | || || || ||||||||||| || ||||| ||||| || || Sbjct 153791 GCGAAGCGGCACCGTAAGGTC-CTCCGGGATAACATCCAGGGGATCACGAAGCCGGCGAT 153733 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| ||| |||| | | || || || ||||| || ||| ||| |||| || |||| Sbjct 153732 CCGGCGTTTGGCGAGGAGGGGAGGGGTGAAGCGGATCAGTGGCTTGATCTACGAGGAGAC 153673 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 | | ||| | ||| | ||| | ||| || |||| || || || ||| ||||| Sbjct 153672 CAGGGGAGTTCTCAAGGTATTCTTGGAGAATGTGATCCGGGACGCCGTCACCTACACCGA 153613 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGC 16656 |||||| || ||||| |||||| ||||||| | |||||||| Sbjct 153612 GCACGCCCGTCGGAAGACCGTCACCGCCATGGACGTTGTCTATGC 153568 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79001765604681