Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq33 102 1e-16 >seq33 Length=1606457 Score = 102 bits (112), Expect = 1e-16 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 63372 CCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCG 63431 || || ||||| | || | ||| || | |||| |||| ||||||||||||| ||| || Sbjct 1148410 CCCCCTTGATCAACATAACGAGCAGTATCATTAAAAACCCTCAACATTGGAACAATGCCA 1148469 Query 63432 TTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGAT 63491 || ||| | ||||| || || |||||| || ||| | ||||||||||| | ||| Sbjct 1148470 TTAGATGTCCCATTTGTCCCACGGATATAACTACCAGTTGCACGAATATTGTGAGCAGAT 1148529 Query 63492 AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATA 63551 | || ||||| || || ||| || | || ||| ||||| || ||||| || Sbjct 1148530 ATGCCAATTCCTCCAGCAGATTTGCTTATAACAGCACATTCCTTTAAAGTATCATATATT 1148589 Query 63552 CCCTCTATGCTATCATCGATCATG 63575 ||||| ||||||||||| ||||| Sbjct 1148590 CCCTCAATGCTATCATCTTTCATG 1148613 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622321784371720