Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq652 98.7 3e-15 seq617 98.7 3e-15 >seq652 Length=146776 Score = 98.7 bits (108), Expect = 3e-15 Identities = 156/220 (71%), Gaps = 3/220 (1%) Strand=Plus/Plus Query 363622 ATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCC 363681 ||||| || ||| || ||||| |||| |||||| || | | | |||||| | || | Sbjct 110288 ATGAAAGATGATAGTATTGAGGGAATCTATGACACTCTGATGGAATGTGCTGTCATAAGC 110347 Query 363682 AAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACAT 363740 ||| ||| || ||||||||||| || | || || | ||||| |||| ||||| || Sbjct 110348 AAGTCTGCTGGAGGAATTGGTGTTTCAGTTCATAACATACGTGCTACAG-GTAGTTATAT 110406 Query 363741 TCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATAC 363800 ||| || ||| ||| || ||||| | ||||| ||| | || |||||| | ||||| Sbjct 110407 TCGTGGGACAAATGGAACTTCTAATGGCATTGTTCCGATGTTGCGGGTGTTTAATAATAC 110466 Query 363801 TGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGG 363840 ||| | || || || || || ||||| ||| | |||||| Sbjct 110467 TGCTCGTTATGTTGATCAAGGGGGAGGCAAGAG-AAAGGG 110505 >seq617 Length=160175 Score = 98.7 bits (108), Expect = 3e-15 Identities = 154/219 (70%), Gaps = 1/219 (0%) Strand=Plus/Plus Query 363622 ATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCC 363681 ||||| || ||| || ||||| |||| |||||| || ||| | |||||| |||| | Sbjct 53166 ATGAAAGATGATAGTATTGAGGGAATCTATGACACTCTGAAGGAATGTGCTGTTATAAGC 53225 Query 363682 AAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCACAGAACAGTTACATT 363741 ||| ||| || ||||||||||| || | || ||| | ||||| | ||||| ||| Sbjct 53226 AAGTCTGCTGGAGGAATTGGTGTTTCAGTTCATAATATACGTGCCACGGGTAGTTATATT 53285 Query 363742 CGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACT 363801 || || ||| ||| || ||||| | || || ||||| | |||||| | ||||| Sbjct 53286 CGTGGGACAAATGGAACTTCTAATGGCATTGTGCCGATGCTGAGGGTGTTTAATGATACT 53345 Query 363802 GCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGG 363840 || | || || || || || ||||| ||| | |||||| Sbjct 53346 GCTCGTTATGTTGATCAAGGGGGAGGCAAGAG-AAAGGG 53383 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1302012368907894