Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24]
80,317 sequences; 556,480,649 total letters
Query= NC_007814.1
Length=37974
Score E
Sequences producing significant alignments: (Bits) Value
seq7757 708 0.0
seq31478 235 1e-57
seq13815 203 8e-48
seq49971 172 1e-38
>seq7757
Length=3350
Score = 708 bits (784), Expect = 0.0
Identities = 1183/1705 (69%), Gaps = 15/1705 (1%)
Strand=Plus/Plus
Query 13074 ATTGATGATTTAAAAATTTGGAAGGTAAACAAAGTTCCATCTAATGCACAACCATATATC 13133
||||||||||| ||||||||||| || || | | || || | || |||||
Sbjct 135 ATTGATGATTTGAAAATTTGGAAAGTCAATATGAATACACAAGATAATCCTCCTTATATT 194
Query 13134 TTTGATACTGGAGATAAAATTGTTATCGATACTGAGAAAAGTCTTGTCACGATCAATGGG 13193
|||||| ||||||||| | ||||||||||||||| ||||||||| | ||||||||
Sbjct 195 TTTGATGTTGGAGATAAGGTGGTTATCGATACTGAGCGAAGTCTTGTATCAATCAATGGT 254
Query 13194 GAGAAAGCAATCAATATAAAAGAAATCTTTAGTAATTTTCCTATCGTAATACGTGGTGAA 13253
| ||||| || ||| ||||||| || || ||| ||| ||| | || | || |
Sbjct 255 AAAAAAGCTATTAATTTAAAAGATATATTCAGTGATTATCCAGTTGTTAGCGAAGGCTCA 314
Query 13254 AATCGTATCGATATAATGCCACCTGATGTA---AATGCAACAATCAGTTATAGGGAGAGA 13310
|| | || || ||||| | ||||| | || | | | | |||||||||| ||
Sbjct 315 AACAAACTTGAAATTATGCCTTCCGATGTGGGGACAGCTAAAGTGATTTATAGGGAGCGA 374
Query 13311 TATAGATGAGAACACCAAGCGGGATTTTGCATGTTGTGGATTTTAAAACGGATCAAATCG 13370
| | ||||||||||| || || || | ||| || | |||||| |||| |||||||| |
Sbjct 375 TTCAAATGAGAACACCTAGTGGTATCCTTCATATTATTGATTTTCAAACAGATCAAATTG 434
Query 13371 TCGCAGCTATCCAGCCAGAGGACTATTGGGATGACAAACGGCATTGGGAACTAAAAAATA 13430
| || |||| || || | || |||||| ||| | || ||||||||| ||||| |||
Sbjct 435 TGGCCACTATACAACCGAAAGATTATTGGAGTGATATTCGTCATTGGGAAATAAAAGATA 494
Query 13431 ACATTGACATGTTGGATTTCACCGCTTTTGATGGAACAGACCATGCAGTTACGTTACAAC 13490
| |||| | || || || | | |||||| || || ||||||| | | | |
Sbjct 495 ATGTTGATACATTAGAGTTTAAAGTGTTTGATAATACGGAACATGCAGCTGCACTCATGC 554
Query 13491 AACAGAATCTTGTTTTAAAAGAAGTTCGCGATGGAAGAATCGTACCGTATGTTAT---TA 13547
| || ||| | || ||||||||||| || |||||| | || || || || ||||| ||
Sbjct 555 AGCAAAATTTAGTATTAAAAGAAGTGCGTGATGGACGGATTGTTCCTTACGTTATAAATA 614
Query 13548 CAGAGACTGaaaaaaaTTCC-GATAAACGATCCATTACCACATACGCTTCAGGAGCTTGG 13606
|| ||||||| |||| || | | |||| |||| | ||||| || ||||||
Sbjct 615 ATGAAGCTGAAAAGGATTCAAGAGATA-GATCACTTACTGTACGTGCTTCCGGTGCTTGG 673
Query 13607 ATTCAAATTGCTAAATCAGGGGTCATAAAACCACAACGGATAGAGAGTAAGACGGTCAAC 13666
|||||||||| ||| || || |||||||| ||||| |||| || || ||
Sbjct 674 GTTCAAATTGCAAAAGACGGTTATATCCTGCCACAACGTATAGAAGGTAAAACAGTAAAT 733
Query 13667 GAATTTATGGATTTAGCACTCTTAGGTATGAAGTGGCAGCGTGGAGTTACTGAATATGCT 13726
| ||||||||| | || || |||||| ||||||| | ||||| || || ||||||
Sbjct 734 CAGTTTATGGATATGGCTCTTGTAGGTACGAAGTGGAAACGTGGCAGAACAGAGTATGCT 793
Query 13727 GGATTTCATACAATGACCATCGATGAATATATGGACTCACTCACTTTTTTAAAGAAGATT 13786
|| || |||||||||||||||||| ||| || | || || ||||||||||| ||
Sbjct 794 GGTTTCCATACAATGACCATCGATACCATTATAGATCCTCTTACCTTTTTAAAGAAAATA 853
Query 13787 GCATCTTTATTTAAACTGGAAATTCGATATCGTGTTGAGATTAAAGGTTCAAAAATCATC 13846
|| |||||||| | | || |||| ||| ||||| || | |||||| | || |
Sbjct 854 GCTTCTTTATTCGATTTAGAGATTCAATACCGTGTAGAAGTAGTCGGTTCACAGATTGTT 913
Query 13847 GGTTGGTATGTAGATATGATTCAAAAACGCGGGCATGATACAGGCAAAGAAATAGAATTA 13906
|| ||||| || |||||| | |||||||||| || | |||||| ||| || |||
Sbjct 914 GGCTGGTACGTGGATATGGTGAAAAAACGCGGTAGAGACATAGGCAAGGAAGTAACTTTA 973
Query 13907 GGAAAAGATTTAGTCGGTGTTACGCGTATTGAACATACACGTAATATTTGCACTGCTTTA 13966
|| || |||||||| ||||||| |||||||| ||| | | || |||| ||||| |||
Sbjct 974 GGGAAGGATTTAGTTGGTGTTAAACGTATTGAGCATTCTAGGGATGTTTGTACTGCCTTA 1033
Query 13967 GTTGGATTTGTAAAAGGTGAAGGTGACAAGGTAATCACTATTGAAAGTATTAATAAAGGT 14026
|| ||||| || | || ||||| | | | || || ||||||| |||||| | |||
Sbjct 1034 GTCGGATTCGTCCAGGGCGAAGGGGGTACCATTATTACAGTTGAAAGCATTAATGATGGT 1093
Query 14027 CTACCCTATATCGTAGATGCAGATGCATTTCAAAGATGGAATGAACACGGACAACATAAA 14086
|||| ||||| ||| ||||| | |||| | ||||| || | || ||||||||
Sbjct 1094 TTACCTTATATTACTGATAGCGATGCCTATCAACGCTGGAACGAGAATGGTAAACATAAA 1153
Query 14087 TTCGGTTTTTATACACCAGAAACAGAAGAATTAGACATGACTCCAAAACGTTTACTGACG 14146
|| || || || || ||||||||||||||| | | ||||| ||||| || | ||||
Sbjct 1154 TTTGGCTTCTACACTCCAGAAACAGAAGAACAAAATATGACACCAAAGCGGCTCATGACT 1213
Query 14147 CTTATGGAAATAGAATTGAAAAAGCGTGTCAATTCCTCAATCTCTTATGAAGTGGAAGCA 14206
|||||| ||| ||| || || || || ||| | || | ||| || || ||||||
Sbjct 1214 CTTATGAAAACAGAGTTCGCTAAACGCGTTAATACTTCTGTTGTTTACGATGTAGAAGCA 1273
Query 14207 CAATCAATTGGTCGTATTTTCGGCCTAGAACACGAATTAATTAACGAAGGCGACACGATC 14266
| | || || ||| | || || ||| || || ||||||| ||||| || || ||
Sbjct 1274 GCAGCTATAGGGCGTGTATTTGGACTATCTCATGAGCTAATTAATGAAGGAGATACAATT 1333
Query 14267 AAAATTAAAGATACAGGGTTTACACCAGAATTATATCTTGAAGCGCGAGTAATAGCTGGA 14326
|||||||||||| || |||||||| || | ||| | ||||| || | ||| ||||||
Sbjct 1334 CGAATTAAAGATACTGGATTTACACCGAAACTTTATTTAGAAGCACGGGCAATCGCTGGA 1393
Query 14327 GATGAATCTTTTACAGACCCAACGCAAGATAAATATGAATTCGGAGATTATCGTGAGATT 14386
||||| || ||||||||||| | ||||||||||||| || || || |||||||| |||
Sbjct 1394 GATGAGTCATTTACAGACCCTTCACAAGATAAATATGTGTTTGGCGACTATCGTGAAATT 1453
Query 14387 GTTAATCAAAATGAGGAATTAAGAAAAATTTACAATCGTATTCTTAGTTCGCTTGGCAAT 14446
| ||| ||||| ||| | | ||| | || ||| | | ||| ||| | || |||
Sbjct 1454 ACTGATCCGAATGAAGAAATGCGGAAATTGTATAATAGAGTACTTGCTTCTTTAGGTAAT 1513
Query 14447 AAAC------AAGAAATGATAGACCAGCTAGATAAACTAGTGAACGAAGCTAACGAAACC 14500
||| ||||| | |||| || ||||| || ||| | ||||| || | ||
Sbjct 1514 AAAGCCAATAAAGAACTATTAGAACAACTAGAAAAGTTAGCAGAAGAAGCGAAAGGGACA 1573
Query 14501 GCTAGTAATGCA-AAGAAGGAGTCAGAAGCAGCAAAAGCACTAGCTGAAAAAGTACAAGA 14559
||| | || || || || || || |||| || | ||| |||||||| || || ||
Sbjct 1574 GCTGAACAAGCTCAAAAAAGAATCTCAAACAGCCAAGGAACTTGCTGAAAAGGTCCAGGA 1633
Query 14560 GAATATTAAAAATAATACCGTTGAAATTATAGAATCCAAGAATCCACCGACAACAGGACT 14619
||| | ||||||||||| || | ||||| ||| | || ||||||||||| ||
Sbjct 1634 AAATCTAAAAAATAATACGGTAAATATTATTGAAGCTAAAAATCCACCGACCGATAATCT 1693
Query 14620 GAAACCTTTTAAAACGCTTTGGCGTGATATTAGTAACGGAAAGCCCGGTATTTTAAAAAT 14679
| | ||||||| | ||||| |||||||| || || || || |||||||||||| |
Sbjct 1694 TATAGTAGGTAAAACGTTATGGCGAGATATTAGCAATGGTAAACCTGGTATTTTAAAAGT 1753
Query 14680 ATGGACAGGTACAGCGTGGGAATCAGTTGTACCCGATGTTGAATCTGTaaaaaaaGAAAC 14739
|||| |||| || ||||| || | || ||||| ||| | | || ||||| ||
Sbjct 1754 GTGGAACGGTAAAGATTGGGAGCTCCTTATTCCTGATGTGGAAGCAATTAAGAAAGATAC 1813
Query 14740 ATTAGATCAGGTTAATAAAGATATT 14764
|| || ||||| | ||||| |||
Sbjct 1814 GTTGGAGCAGGTGACAAAAGAGATT 1838
>seq31478
Length=1036
Score = 235 bits (260), Expect = 1e-57
Identities = 289/395 (73%), Gaps = 0/395 (0%)
Strand=Plus/Minus
Query 17685 GGTACAAAGTGTCCGTATACAATGAAGCCTAAATATATCACTGTTCACAACACATATAAT 17744
||||||||||| || ||||||||||| || ||| || || || ||||| || || ||
Sbjct 1036 GGTACAAAGTGCCCATATACAATGAATCCAGAATTCATTACAGTCCACAATACGTACAAC 977
Query 17745 GATGCTCCAGCTGAAAATGAAGTGAGTTACATGATTAGTAACAATAATGAGGTGTCGTTT 17804
|||||| |||| ||||| ||||| ||| |||||| |||| ||||| | || ||||||
Sbjct 976 GATGCTACAGCAGAAAACGAAGTATCTTATATGATTCGTAATGATAATCAAGTCTCGTTT 917
Query 17805 CATATTGCAGTAGATGACAAGAAAGCGATTCAAGGTATTCCGTTGGAACGTAATGCATGG 17864
||||||||||||||||| || |||| | ||||||||||| || |||||||| || |||
Sbjct 916 CATATTGCAGTAGATGATAAAGAAGCTGTACAAGGTATTCCTTTAGAACGTAACGCTTGG 857
Query 17865 GCTTGCGGAGACGGCAATGGTTCGGGGAATCGTCAATCCATTTCTGTAGAAATCTGTTAT 17924
||| || ||||| || || |||||| |||| || || ||||| || ||
Sbjct 856 CATTGTGGTGACGGTGGCGGAAATGGTAATCGTAAATCTATCGGAGTTGAAATTTGCTAC 797
Query 17925 TCAAAATCAGGAGGAGATAGATACTATAAAGCTGAGGATAATGCTGTTGATGTTGTACGA 17984
|| | || |||||| |||| |||||||| || |||||||| | | |||||| |
Sbjct 796 TCTTTAAGCGGTGGAGATCGATATTATAAAGCAGAAGATAATGCAGCTATCGTTGTAGCA 737
Query 17985 CAACTTATGTCTATGTACAATATTCCGATTGAAAATGTTCGAACTCATCAATCCTGGTCA 18044
||| | ||| |||||||||||| ||| || ||||| || || ||||| |||
Sbjct 736 CAATTAATGAAACAGTACAATATTCCAATTAGTAAAGTTCGCACACACCAATCATGGAGT 677
Query 18045 GGTAAATATTGTCCGCATAGAATGTTAGCTGAGGG 18079
|| || |||||||| ||| | ||| | | ||| ||
Sbjct 676 GGAAAGTATTGTCCTCATCGTATGCTTGATGAAGG 642
>seq13815
Length=1928
Score = 203 bits (224), Expect = 8e-48
Identities = 243/328 (74%), Gaps = 4/328 (1%)
Strand=Plus/Minus
Query 9016 TTAGGTGAAGCAGCCGAAATTGCTTCCACAGCTCTGAATGCATTTAAAGCAGACCATCTT 9075
||||| || || || |||||||||| || ||||| ||||| |||| || || ||||
Sbjct 1926 TTAGGAGATGCTGCTCAAATTGCTTCGACTGCTCTTAATGCGTTTAGGGCTGATAATCTA 1867
Query 9076 TCAGTTGCGGATGCAGCCAATATTTTATCTGGTGCAGCCAATGCTTCCGCAACTGATGTA 9135
||||| | ||||| |||||| | ||| ||||||| || ||||| || |||||| |||||
Sbjct 1866 TCAGTAACCGATGCGGCCAATCTCTTAGCTGGTGCTGCAAATGCATCGGCAACTAATGTA 1807
Query 9136 AGAGAGTTAAAATATGGACTTTCA--GCTTCATCAGCAGTAGCAGCGGGAGCCGGAATGA 9193
| || | |||| ||| | ||| | || || ||||||||| | |||| ||| |||
Sbjct 1806 AAGGAAATGCAATACGGATTATCAATGGTT--TCTGCAGTAGCATCTGGAGTCGGTTTGA 1749
Query 9194 CGTTTAAGGATACAGCTACAACTTTAGCGGTATTTGCACAAAATGGTCTTAAGGGATCAG 9253
|||||||||||| |||| | |||| ||||||| ||||| || ||| ||||| |
Sbjct 1748 GTTTTAAGGATACAACTACTGCCCTAGCATTATTTGCCCAAAACGGGCTTCGCGGATCGG 1689
Query 9254 ATGCAGGTACATCTTTAAAAACAATGTTAATGAGGTTAAATCCTTCAACAAAAGAAGCAT 9313
|||||||||||||||||||||||||| || | |||| |||| | | || ||||| |
Sbjct 1688 ATGCAGGTACATCTTTAAAAACAATGCTAGCTAACTTAATTCCTAAATCTAAGGAAGCGT 1629
Query 9314 ATAACAAAATGAGAGATTTAGGACTTAT 9341
|| | | | || || |||||||| ||
Sbjct 1628 ATGAATTATTTAGTGAATTAGGACTAAT 1601
>seq49971
Length=731
Score = 172 bits (190), Expect = 1e-38
Identities = 364/533 (68%), Gaps = 15/533 (3%)
Strand=Plus/Plus
Query 11694 AGAACTGAATTTAACCGTAAACATGACTAATGTTTTA--GATGGAAAAGAGCTTGCAAAC 11751
|||| | ||||| || || ||| | || || ||| | || || |||| |||||||
Sbjct 123 AGAAATTAATTTGACAGTTAACCTTAC--ATCTTTAATGGACGGTCAAGAAGTTGCAAAA 180
Query 11752 GGAAGTTACACCTATACTACAAAACTTCAAAATCGTGAACAAAAAAGAAGAGCGGAATTT 11811
|| | | ||||| |||||| | |||| | | || ||| |||| |||||
Sbjct 181 ATAACAGAGCCTTATACAACAAAAATACAAAGAAGAAATAAAGAAATTAGAGATCAATTT 240
Query 11812 TAAGGGTGGTGAGCACGTTGGGGAAACTTA--GTTTTACTTTTAATAATATTAGAAAAGA 11869
||||| |||| || | |||||| | | ||||||| ||||||||| |||| |
Sbjct 241 TAAGGAGGGTGCTCATG--GGGGAATATCAAAGTTTTACATTTAATAATCAAAGAAGAAG 298
Query 11870 TTATATTCAAATGC-TAGTTGGAAGAAAACGTCCTTCATGGGCTCCAGTAAAAAGAAGAT 11928
|| ||| ||||| ||| || | ||| | ||| | ||||| || | ||| | | |
Sbjct 299 CTACATTTTAATGCCTAGA-GGTCGTAAAAGACCTGCTTGGGCACCTATTAAACGTAATT 357
Query 11929 TAGTA-AGAGTCCCTCATCGCGCAGGGGCTCTTTTACTTAATACAGAAACGGAGGAACGT 11987
| || | | | || | |||| || || | | |||||| |||| |||
Sbjct 358 TCTTATATACGCAAGGATATC-CAGGAGCAAGGCTATTAAGCACAGAAGTAGAGGCGCGT 416
Query 11988 CGTATTGACGTTCCTCTTGTTATTAAAGCGAAAAAAGATATGGCAGATTTACAAAAGTTA 12047
| |||||||| |||||| || ||||||| | ||||||| || |||||||| ||| |
Sbjct 417 CAAATTGACGTGCCTCTTATTGTTAAAGC---ACAAGATATTGCTGATTTACAGAAGGTC 473
Query 12048 AAAGAAGATTTAGCGGATTGGTTATATACAGAGCAACCTGCTGAACTTATTTTTGATGAT 12107
|||||||||||||||||||||||| |||||| || ||| | |||||||||||
Sbjct 474 AAAGAAGATTTAGCGGATTGGTTAATTACAGAACAGGAATGTGAGTTGATTTTTGATGAC 533
Query 12108 GAGTTAGACAGGACTTATTTATCATTAATTGATGGTTCTGTCGATTTGGACGAAATAGTC 12167
|| ||| | || |||||| | |||| ||||| || | || || ||| ||||
Sbjct 534 GAACCAGATCGCACGTATTTAGCCCTAATAGATGGATCGTTTGACGCAGAAGAATTAGTG 593
Query 12168 AATAGAGGTAAAGGTGTTATTACTTTTGTTTGTCCAATGCCGTATAAATTAGG 12220
||| | || |||||||| |||| ||| ||||| |||||||||||||||||||
Sbjct 594 AATCGTGGAAAAGGTGTAGTTACATTTATTTGTACAATGCCGTATAAATTAGG 646
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 121279417582944
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