Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= NC_007814.1 Length=37974 Score E Sequences producing significant alignments: (Bits) Value seq7757 708 0.0 seq31478 235 1e-57 seq13815 203 8e-48 seq49971 172 1e-38 >seq7757 Length=3350 Score = 708 bits (784), Expect = 0.0 Identities = 1183/1705 (69%), Gaps = 15/1705 (1%) Strand=Plus/Plus Query 13074 ATTGATGATTTAAAAATTTGGAAGGTAAACAAAGTTCCATCTAATGCACAACCATATATC 13133 ||||||||||| ||||||||||| || || | | || || | || ||||| Sbjct 135 ATTGATGATTTGAAAATTTGGAAAGTCAATATGAATACACAAGATAATCCTCCTTATATT 194 Query 13134 TTTGATACTGGAGATAAAATTGTTATCGATACTGAGAAAAGTCTTGTCACGATCAATGGG 13193 |||||| ||||||||| | ||||||||||||||| ||||||||| | |||||||| Sbjct 195 TTTGATGTTGGAGATAAGGTGGTTATCGATACTGAGCGAAGTCTTGTATCAATCAATGGT 254 Query 13194 GAGAAAGCAATCAATATAAAAGAAATCTTTAGTAATTTTCCTATCGTAATACGTGGTGAA 13253 | ||||| || ||| ||||||| || || ||| ||| ||| | || | || | Sbjct 255 AAAAAAGCTATTAATTTAAAAGATATATTCAGTGATTATCCAGTTGTTAGCGAAGGCTCA 314 Query 13254 AATCGTATCGATATAATGCCACCTGATGTA---AATGCAACAATCAGTTATAGGGAGAGA 13310 || | || || ||||| | ||||| | || | | | | |||||||||| || Sbjct 315 AACAAACTTGAAATTATGCCTTCCGATGTGGGGACAGCTAAAGTGATTTATAGGGAGCGA 374 Query 13311 TATAGATGAGAACACCAAGCGGGATTTTGCATGTTGTGGATTTTAAAACGGATCAAATCG 13370 | | ||||||||||| || || || | ||| || | |||||| |||| |||||||| | Sbjct 375 TTCAAATGAGAACACCTAGTGGTATCCTTCATATTATTGATTTTCAAACAGATCAAATTG 434 Query 13371 TCGCAGCTATCCAGCCAGAGGACTATTGGGATGACAAACGGCATTGGGAACTAAAAAATA 13430 | || |||| || || | || |||||| ||| | || ||||||||| ||||| ||| Sbjct 435 TGGCCACTATACAACCGAAAGATTATTGGAGTGATATTCGTCATTGGGAAATAAAAGATA 494 Query 13431 ACATTGACATGTTGGATTTCACCGCTTTTGATGGAACAGACCATGCAGTTACGTTACAAC 13490 | |||| | || || || | | |||||| || || ||||||| | | | | Sbjct 495 ATGTTGATACATTAGAGTTTAAAGTGTTTGATAATACGGAACATGCAGCTGCACTCATGC 554 Query 13491 AACAGAATCTTGTTTTAAAAGAAGTTCGCGATGGAAGAATCGTACCGTATGTTAT---TA 13547 | || ||| | || ||||||||||| || |||||| | || || || || ||||| || Sbjct 555 AGCAAAATTTAGTATTAAAAGAAGTGCGTGATGGACGGATTGTTCCTTACGTTATAAATA 614 Query 13548 CAGAGACTGaaaaaaaTTCC-GATAAACGATCCATTACCACATACGCTTCAGGAGCTTGG 13606 || ||||||| |||| || | | |||| |||| | ||||| || |||||| Sbjct 615 ATGAAGCTGAAAAGGATTCAAGAGATA-GATCACTTACTGTACGTGCTTCCGGTGCTTGG 673 Query 13607 ATTCAAATTGCTAAATCAGGGGTCATAAAACCACAACGGATAGAGAGTAAGACGGTCAAC 13666 |||||||||| ||| || || |||||||| ||||| |||| || || || Sbjct 674 GTTCAAATTGCAAAAGACGGTTATATCCTGCCACAACGTATAGAAGGTAAAACAGTAAAT 733 Query 13667 GAATTTATGGATTTAGCACTCTTAGGTATGAAGTGGCAGCGTGGAGTTACTGAATATGCT 13726 | ||||||||| | || || |||||| ||||||| | ||||| || || |||||| Sbjct 734 CAGTTTATGGATATGGCTCTTGTAGGTACGAAGTGGAAACGTGGCAGAACAGAGTATGCT 793 Query 13727 GGATTTCATACAATGACCATCGATGAATATATGGACTCACTCACTTTTTTAAAGAAGATT 13786 || || |||||||||||||||||| ||| || | || || ||||||||||| || Sbjct 794 GGTTTCCATACAATGACCATCGATACCATTATAGATCCTCTTACCTTTTTAAAGAAAATA 853 Query 13787 GCATCTTTATTTAAACTGGAAATTCGATATCGTGTTGAGATTAAAGGTTCAAAAATCATC 13846 || |||||||| | | || |||| ||| ||||| || | |||||| | || | Sbjct 854 GCTTCTTTATTCGATTTAGAGATTCAATACCGTGTAGAAGTAGTCGGTTCACAGATTGTT 913 Query 13847 GGTTGGTATGTAGATATGATTCAAAAACGCGGGCATGATACAGGCAAAGAAATAGAATTA 13906 || ||||| || |||||| | |||||||||| || | |||||| ||| || ||| Sbjct 914 GGCTGGTACGTGGATATGGTGAAAAAACGCGGTAGAGACATAGGCAAGGAAGTAACTTTA 973 Query 13907 GGAAAAGATTTAGTCGGTGTTACGCGTATTGAACATACACGTAATATTTGCACTGCTTTA 13966 || || |||||||| ||||||| |||||||| ||| | | || |||| ||||| ||| Sbjct 974 GGGAAGGATTTAGTTGGTGTTAAACGTATTGAGCATTCTAGGGATGTTTGTACTGCCTTA 1033 Query 13967 GTTGGATTTGTAAAAGGTGAAGGTGACAAGGTAATCACTATTGAAAGTATTAATAAAGGT 14026 || ||||| || | || ||||| | | | || || ||||||| |||||| | ||| Sbjct 1034 GTCGGATTCGTCCAGGGCGAAGGGGGTACCATTATTACAGTTGAAAGCATTAATGATGGT 1093 Query 14027 CTACCCTATATCGTAGATGCAGATGCATTTCAAAGATGGAATGAACACGGACAACATAAA 14086 |||| ||||| ||| ||||| | |||| | ||||| || | || |||||||| Sbjct 1094 TTACCTTATATTACTGATAGCGATGCCTATCAACGCTGGAACGAGAATGGTAAACATAAA 1153 Query 14087 TTCGGTTTTTATACACCAGAAACAGAAGAATTAGACATGACTCCAAAACGTTTACTGACG 14146 || || || || || ||||||||||||||| | | ||||| ||||| || | |||| Sbjct 1154 TTTGGCTTCTACACTCCAGAAACAGAAGAACAAAATATGACACCAAAGCGGCTCATGACT 1213 Query 14147 CTTATGGAAATAGAATTGAAAAAGCGTGTCAATTCCTCAATCTCTTATGAAGTGGAAGCA 14206 |||||| ||| ||| || || || || ||| | || | ||| || || |||||| Sbjct 1214 CTTATGAAAACAGAGTTCGCTAAACGCGTTAATACTTCTGTTGTTTACGATGTAGAAGCA 1273 Query 14207 CAATCAATTGGTCGTATTTTCGGCCTAGAACACGAATTAATTAACGAAGGCGACACGATC 14266 | | || || ||| | || || ||| || || ||||||| ||||| || || || Sbjct 1274 GCAGCTATAGGGCGTGTATTTGGACTATCTCATGAGCTAATTAATGAAGGAGATACAATT 1333 Query 14267 AAAATTAAAGATACAGGGTTTACACCAGAATTATATCTTGAAGCGCGAGTAATAGCTGGA 14326 |||||||||||| || |||||||| || | ||| | ||||| || | ||| |||||| Sbjct 1334 CGAATTAAAGATACTGGATTTACACCGAAACTTTATTTAGAAGCACGGGCAATCGCTGGA 1393 Query 14327 GATGAATCTTTTACAGACCCAACGCAAGATAAATATGAATTCGGAGATTATCGTGAGATT 14386 ||||| || ||||||||||| | ||||||||||||| || || || |||||||| ||| Sbjct 1394 GATGAGTCATTTACAGACCCTTCACAAGATAAATATGTGTTTGGCGACTATCGTGAAATT 1453 Query 14387 GTTAATCAAAATGAGGAATTAAGAAAAATTTACAATCGTATTCTTAGTTCGCTTGGCAAT 14446 | ||| ||||| ||| | | ||| | || ||| | | ||| ||| | || ||| Sbjct 1454 ACTGATCCGAATGAAGAAATGCGGAAATTGTATAATAGAGTACTTGCTTCTTTAGGTAAT 1513 Query 14447 AAAC------AAGAAATGATAGACCAGCTAGATAAACTAGTGAACGAAGCTAACGAAACC 14500 ||| ||||| | |||| || ||||| || ||| | ||||| || | || Sbjct 1514 AAAGCCAATAAAGAACTATTAGAACAACTAGAAAAGTTAGCAGAAGAAGCGAAAGGGACA 1573 Query 14501 GCTAGTAATGCA-AAGAAGGAGTCAGAAGCAGCAAAAGCACTAGCTGAAAAAGTACAAGA 14559 ||| | || || || || || || |||| || | ||| |||||||| || || || Sbjct 1574 GCTGAACAAGCTCAAAAAAGAATCTCAAACAGCCAAGGAACTTGCTGAAAAGGTCCAGGA 1633 Query 14560 GAATATTAAAAATAATACCGTTGAAATTATAGAATCCAAGAATCCACCGACAACAGGACT 14619 ||| | ||||||||||| || | ||||| ||| | || ||||||||||| || Sbjct 1634 AAATCTAAAAAATAATACGGTAAATATTATTGAAGCTAAAAATCCACCGACCGATAATCT 1693 Query 14620 GAAACCTTTTAAAACGCTTTGGCGTGATATTAGTAACGGAAAGCCCGGTATTTTAAAAAT 14679 | | ||||||| | ||||| |||||||| || || || || |||||||||||| | Sbjct 1694 TATAGTAGGTAAAACGTTATGGCGAGATATTAGCAATGGTAAACCTGGTATTTTAAAAGT 1753 Query 14680 ATGGACAGGTACAGCGTGGGAATCAGTTGTACCCGATGTTGAATCTGTaaaaaaaGAAAC 14739 |||| |||| || ||||| || | || ||||| ||| | | || ||||| || Sbjct 1754 GTGGAACGGTAAAGATTGGGAGCTCCTTATTCCTGATGTGGAAGCAATTAAGAAAGATAC 1813 Query 14740 ATTAGATCAGGTTAATAAAGATATT 14764 || || ||||| | ||||| ||| Sbjct 1814 GTTGGAGCAGGTGACAAAAGAGATT 1838 >seq31478 Length=1036 Score = 235 bits (260), Expect = 1e-57 Identities = 289/395 (73%), Gaps = 0/395 (0%) Strand=Plus/Minus Query 17685 GGTACAAAGTGTCCGTATACAATGAAGCCTAAATATATCACTGTTCACAACACATATAAT 17744 ||||||||||| || ||||||||||| || ||| || || || ||||| || || || Sbjct 1036 GGTACAAAGTGCCCATATACAATGAATCCAGAATTCATTACAGTCCACAATACGTACAAC 977 Query 17745 GATGCTCCAGCTGAAAATGAAGTGAGTTACATGATTAGTAACAATAATGAGGTGTCGTTT 17804 |||||| |||| ||||| ||||| ||| |||||| |||| ||||| | || |||||| Sbjct 976 GATGCTACAGCAGAAAACGAAGTATCTTATATGATTCGTAATGATAATCAAGTCTCGTTT 917 Query 17805 CATATTGCAGTAGATGACAAGAAAGCGATTCAAGGTATTCCGTTGGAACGTAATGCATGG 17864 ||||||||||||||||| || |||| | ||||||||||| || |||||||| || ||| Sbjct 916 CATATTGCAGTAGATGATAAAGAAGCTGTACAAGGTATTCCTTTAGAACGTAACGCTTGG 857 Query 17865 GCTTGCGGAGACGGCAATGGTTCGGGGAATCGTCAATCCATTTCTGTAGAAATCTGTTAT 17924 ||| || ||||| || || |||||| |||| || || ||||| || || Sbjct 856 CATTGTGGTGACGGTGGCGGAAATGGTAATCGTAAATCTATCGGAGTTGAAATTTGCTAC 797 Query 17925 TCAAAATCAGGAGGAGATAGATACTATAAAGCTGAGGATAATGCTGTTGATGTTGTACGA 17984 || | || |||||| |||| |||||||| || |||||||| | | |||||| | Sbjct 796 TCTTTAAGCGGTGGAGATCGATATTATAAAGCAGAAGATAATGCAGCTATCGTTGTAGCA 737 Query 17985 CAACTTATGTCTATGTACAATATTCCGATTGAAAATGTTCGAACTCATCAATCCTGGTCA 18044 ||| | ||| |||||||||||| ||| || ||||| || || ||||| ||| Sbjct 736 CAATTAATGAAACAGTACAATATTCCAATTAGTAAAGTTCGCACACACCAATCATGGAGT 677 Query 18045 GGTAAATATTGTCCGCATAGAATGTTAGCTGAGGG 18079 || || |||||||| ||| | ||| | | ||| || Sbjct 676 GGAAAGTATTGTCCTCATCGTATGCTTGATGAAGG 642 >seq13815 Length=1928 Score = 203 bits (224), Expect = 8e-48 Identities = 243/328 (74%), Gaps = 4/328 (1%) Strand=Plus/Minus Query 9016 TTAGGTGAAGCAGCCGAAATTGCTTCCACAGCTCTGAATGCATTTAAAGCAGACCATCTT 9075 ||||| || || || |||||||||| || ||||| ||||| |||| || || |||| Sbjct 1926 TTAGGAGATGCTGCTCAAATTGCTTCGACTGCTCTTAATGCGTTTAGGGCTGATAATCTA 1867 Query 9076 TCAGTTGCGGATGCAGCCAATATTTTATCTGGTGCAGCCAATGCTTCCGCAACTGATGTA 9135 ||||| | ||||| |||||| | ||| ||||||| || ||||| || |||||| ||||| Sbjct 1866 TCAGTAACCGATGCGGCCAATCTCTTAGCTGGTGCTGCAAATGCATCGGCAACTAATGTA 1807 Query 9136 AGAGAGTTAAAATATGGACTTTCA--GCTTCATCAGCAGTAGCAGCGGGAGCCGGAATGA 9193 | || | |||| ||| | ||| | || || ||||||||| | |||| ||| ||| Sbjct 1806 AAGGAAATGCAATACGGATTATCAATGGTT--TCTGCAGTAGCATCTGGAGTCGGTTTGA 1749 Query 9194 CGTTTAAGGATACAGCTACAACTTTAGCGGTATTTGCACAAAATGGTCTTAAGGGATCAG 9253 |||||||||||| |||| | |||| ||||||| ||||| || ||| ||||| | Sbjct 1748 GTTTTAAGGATACAACTACTGCCCTAGCATTATTTGCCCAAAACGGGCTTCGCGGATCGG 1689 Query 9254 ATGCAGGTACATCTTTAAAAACAATGTTAATGAGGTTAAATCCTTCAACAAAAGAAGCAT 9313 |||||||||||||||||||||||||| || | |||| |||| | | || ||||| | Sbjct 1688 ATGCAGGTACATCTTTAAAAACAATGCTAGCTAACTTAATTCCTAAATCTAAGGAAGCGT 1629 Query 9314 ATAACAAAATGAGAGATTTAGGACTTAT 9341 || | | | || || |||||||| || Sbjct 1628 ATGAATTATTTAGTGAATTAGGACTAAT 1601 >seq49971 Length=731 Score = 172 bits (190), Expect = 1e-38 Identities = 364/533 (68%), Gaps = 15/533 (3%) Strand=Plus/Plus Query 11694 AGAACTGAATTTAACCGTAAACATGACTAATGTTTTA--GATGGAAAAGAGCTTGCAAAC 11751 |||| | ||||| || || ||| | || || ||| | || || |||| ||||||| Sbjct 123 AGAAATTAATTTGACAGTTAACCTTAC--ATCTTTAATGGACGGTCAAGAAGTTGCAAAA 180 Query 11752 GGAAGTTACACCTATACTACAAAACTTCAAAATCGTGAACAAAAAAGAAGAGCGGAATTT 11811 || | | ||||| |||||| | |||| | | || ||| |||| ||||| Sbjct 181 ATAACAGAGCCTTATACAACAAAAATACAAAGAAGAAATAAAGAAATTAGAGATCAATTT 240 Query 11812 TAAGGGTGGTGAGCACGTTGGGGAAACTTA--GTTTTACTTTTAATAATATTAGAAAAGA 11869 ||||| |||| || | |||||| | | ||||||| ||||||||| |||| | Sbjct 241 TAAGGAGGGTGCTCATG--GGGGAATATCAAAGTTTTACATTTAATAATCAAAGAAGAAG 298 Query 11870 TTATATTCAAATGC-TAGTTGGAAGAAAACGTCCTTCATGGGCTCCAGTAAAAAGAAGAT 11928 || ||| ||||| ||| || | ||| | ||| | ||||| || | ||| | | | Sbjct 299 CTACATTTTAATGCCTAGA-GGTCGTAAAAGACCTGCTTGGGCACCTATTAAACGTAATT 357 Query 11929 TAGTA-AGAGTCCCTCATCGCGCAGGGGCTCTTTTACTTAATACAGAAACGGAGGAACGT 11987 | || | | | || | |||| || || | | |||||| |||| ||| Sbjct 358 TCTTATATACGCAAGGATATC-CAGGAGCAAGGCTATTAAGCACAGAAGTAGAGGCGCGT 416 Query 11988 CGTATTGACGTTCCTCTTGTTATTAAAGCGAAAAAAGATATGGCAGATTTACAAAAGTTA 12047 | |||||||| |||||| || ||||||| | ||||||| || |||||||| ||| | Sbjct 417 CAAATTGACGTGCCTCTTATTGTTAAAGC---ACAAGATATTGCTGATTTACAGAAGGTC 473 Query 12048 AAAGAAGATTTAGCGGATTGGTTATATACAGAGCAACCTGCTGAACTTATTTTTGATGAT 12107 |||||||||||||||||||||||| |||||| || ||| | ||||||||||| Sbjct 474 AAAGAAGATTTAGCGGATTGGTTAATTACAGAACAGGAATGTGAGTTGATTTTTGATGAC 533 Query 12108 GAGTTAGACAGGACTTATTTATCATTAATTGATGGTTCTGTCGATTTGGACGAAATAGTC 12167 || ||| | || |||||| | |||| ||||| || | || || ||| |||| Sbjct 534 GAACCAGATCGCACGTATTTAGCCCTAATAGATGGATCGTTTGACGCAGAAGAATTAGTG 593 Query 12168 AATAGAGGTAAAGGTGTTATTACTTTTGTTTGTCCAATGCCGTATAAATTAGG 12220 ||| | || |||||||| |||| ||| ||||| ||||||||||||||||||| Sbjct 594 AATCGTGGAAAAGGTGTAGTTACATTTATTTGTACAATGCCGTATAAATTAGG 646 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 121279417582944