Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq13 125 7e-24 seq27 123 2e-23 seq474 120 3e-22 seq1025 116 3e-21 seq241 114 1e-20 seq464 107 2e-18 seq121 102 8e-17 seq129 86.0 6e-12 >seq13 Length=2550137 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||| | || || || | ||| | ||| |||||||| || |||||||| ||| Sbjct 1356593 CCACCGCGGAGGCGGAGGACGAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 1356652 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||| || ||||| || || ||| |||| | |||||||||||||| ||| Sbjct 1356653 AGGGTGCGGCCGTCTTCGAGCTGTTTTCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGG 1356712 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | || || | |||||||| Sbjct 1356713 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACC 1356772 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||| | ||| || || || || || || ||||| |||||||| Sbjct 1356773 TCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCAT 1356819 >seq27 Length=1763170 Score = 123 bits (136), Expect = 2e-23 Identities = 167/229 (73%), Gaps = 3/229 (1%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | || || || | ||| | ||| || ||||| || || ||||| ||| Sbjct 581123 GCCACCCCGGAGTCG-AGGACGAGATGGAGGGTGGATTCCTTCTGGATATTGTAGTCGGC 581065 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | |||||| |||||| ||||||||||| || |||| | |||||||||||| || || Sbjct 581064 AAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCTGGGGG 581005 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTG-CTTGAGCTGCTCCACAGTATCGGTGGACTCGA 131185 ||| || || ||||| ||| | | || ||| | | || | ||||||| |||||| | Sbjct 581004 GATGCCCTCCTTGTC-TTGAATCTTTGCCTTAACGTTGTCGATGGTATCGGAGGACTCCA 580946 Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| || ||||| ||||| || ||||| |||||||| Sbjct 580945 CCTCAAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 580897 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | || ||||| | ||| | || || ||||| |||||||||||||| Sbjct 581579 GCCACCACGGAGGCGGAGCACCAGATGAAGAGTGGATTCCTTCTGAATGTTGTAATCCGC 581520 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || |||||| ||||| |||||||| || || |||| |||||||||||||| ||||| Sbjct 581519 CAGGGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAAACGCTGCTGGTCTGGAGG 581460 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || || || ||||| ||||| ||| | | || | ||||| | | ||||| Sbjct 581459 AATACCCTCCTTGTCCTGAATTTTGGCCTTCACATTGTCAATCGTATCCGAGCTCTCGAC 581400 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| || || || || ||||| || || |||||||| Sbjct 581399 CTCAAGGGTGATGGTCTTCCCAGTGAGGGTTTTGACAAAGATCTGCAT 581352 >seq474 Length=218880 Score = 120 bits (132), Expect = 3e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | || || || | || | || |||||||| || |||||||||||| Sbjct 25074 GCCACCACGGAGGCGGAGGACGAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAATCGGC 25133 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | |||||| |||||| |||||||| || ||| |||| | ||||||||||| || || Sbjct 25134 GAGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCTGGCGG 25193 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || ||||| ||| || ||||| | || | || |||| |||||| | Sbjct 25194 GATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGACTCCAC 25253 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 |||| ||| | || || || || || || || ||||| ||||||||| Sbjct 25254 CTCGAGGGTGATAGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCATG 25302 >seq1025 Length=71329 Score = 116 bits (128), Expect = 3e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| ||||| | || || || | ||| | ||| |||||||| || |||||||| || Sbjct 8505 GCCGCCGCGGAGGCGGAGGACGAGATGGAGGGTGGACTCCTTCTGTATGTTGTAGTCAGC 8446 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||| || |||||| |||||||| || ||| |||| | ||||||||||||||||| Sbjct 8445 GAGGGTCCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCCGGAGG 8386 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || ||||| ||| || ||||| | || | || |||| ||||| | Sbjct 8385 GATGCCCTCCTTGTCCTGGATCTTGGTCTTGACATTGTCGATGGTGTCGGAAGACTCCAC 8326 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | ||| | || || || || || || || ||||| ||||||||| Sbjct 8325 CTCAAGGGTGATAGTCTTCCCCGTGAGGGTCTTCACGAAGATCTGCATG 8277 >seq241 Length=450715 Score = 114 bits (126), Expect = 1e-20 Identities = 141/193 (73%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 131042 ACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGT 131101 ||||||| || || || || ||| | || || |||||| ||||||||||| ||| Sbjct 239433 ACTCCTTCTGGATATTATAGTCGGCGAGCGTCCGGCCGTCCTCGAGCTGCTTGCCGGCGA 239374 Query 131102 AGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCT 131161 |||| | ||| ||||||||||| ||||| || || ||||| ||| || ||||| | Sbjct 239373 AGATAAGACGTTGCTGGTCCGGGGGGATGCCCTCCTTGTCTTGGATCTTGGCCTTGACGT 239314 Query 131162 GCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTA 131221 || | ||||| | |||||||| || | ||||| ||| || ||||| || || || | Sbjct 239313 TGTCGATCGTATCCGAGGACTCGACCTCCAGGGTAATGGTCTTGCCGGTGAGGGTCTTCA 239254 Query 131222 CGAAAATCTGCAT 131234 |||| |||||||| Sbjct 239253 CGAAGATCTGCAT 239241 >seq464 Length=225985 Score = 107 bits (118), Expect = 2e-18 Identities = 145/201 (72%), Gaps = 1/201 (0%) Strand=Plus/Plus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 || ||||||||||| ||||| |||||| | |||||| |||||| || |||||||| Sbjct 137852 GTGGACTCCTTTTGGATGTTATAATCGGCGAGGGTGCGGCCGTCCTCGAGTTGCTTGCCG 137911 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157 ||| |||| | |||||||||||||| ||||| ||||| || || ||| || |||| Sbjct 137912 GCGAAGATCAGGCGCTGCTGGTCCGG-GGGATGCCTTCCTTATCCTGGATCTTGGCCTTG 137970 Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217 | | || | || || | | ||||| || | ||| | || || ||||| || || Sbjct 137971 ACGTTGTCGATCGTGTCCGAGCTCTCGACCTCCAAGGTGATCGTCTTGCCGGTGAGGGTC 138030 Query 131218 TTTACGAAAATCTGCATGACT 131238 || ||||| || |||||| || Sbjct 138031 TTGACGAAGATTTGCATGCCT 138051 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||| | || ||||| | ||| | ||| |||||||| ||||| ||||| ||| Sbjct 137594 CCACCGCGGAGGCGGAGCACCAGATGGAGGGTGGACTCCTTCTGAATATTGTAGTCGGCG 137653 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || | |||||| |||||||| || ||| |||| | | |||||||||||| || Sbjct 137654 AGCGTCCTGCCGTCCTCAAGCTGCTTCCCGGCGAAGATCAGCCTCTGCTGGTCCGGCGGA 137713 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| ||| ||| | | || | ||||| | ||| | Sbjct 137714 ATCCCCTCCTTGTCCTGGATCTTCGCCTTCACATTATCAATGGTATCCGAACTCTCCACT 137773 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||| | || || || || || || || || || || ||||| Sbjct 137774 TCGAGGGTGATCGTCTTTCCCGTAAGGGTCTTCACAAATATTTGCAT 137820 >seq121 Length=770561 Score = 102 bits (112), Expect = 8e-17 Identities = 162/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| | || |||||||| | || | ||| || ||||| |||||||||||||| Sbjct 402986 GCCACCCCTCAGCCGCAGCACCAGGTGAAGGGTGGATTCCTTCTGAATGTTGTAATCTGC 403045 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || ||||| | || || |||||||| || || |||| | ||||||||| ||| || Sbjct 403046 CAGCGTGCGTGCATCTTCGAGCTGCTTTCCAGCAAAGATAAGACGCTGCTGATCCACAGA 403105 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTG-CTTGAGCTGCTCCACAGTATCGGTGGACTCGA 131185 ||||||||| || || ||| | | || ||||| | || | || |||| | ||| | Sbjct 403106 GATTCCTTCCTTATC-CTGAATCTTTGCCTTGACATTATCGATGGTGTCGGAGCTCTCCA 403164 Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | || | || || || || | ||| ||||| || ||||||||| Sbjct 403165 CCTCCAAAGTGATCGTCTTCCCCGTCAAAGTCTTTACAAAGATCTGCATG 403214 >seq129 Length=753513 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | |||||| || | ||| | || || ||||| || ||||| || || | Sbjct 556000 CCACCACGAAGACGCAGGACAAGATGGAGAGTGGATTCCTTCTGGATGTTATAGTCTGCC 556059 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| ||| ||||| |||||||| || || | || | | |||||| || |||||| Sbjct 556060 AGGGTACGCCCATCCTCAAGCTGCTTCCCAGCAAAAATGAGCCTCTGCTGATCAGGAGGG 556119 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||||||||| ||| || ||||| | || | || || | | ||| | Sbjct 556120 ATCCCTTCTTTGTCTTGGATCTTGGCCTTGACATTATCGATGGTGTCTGAGCTCTCCACT 556179 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| || || || || || || || || |||||||| Sbjct 556180 TCCAGAGTGATGGTCTTCCCAGTGAGGGTCTTCACAAATATCTGCAT 556226 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471538916849280