Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq27 102 7e-17 seq129 100 2e-16 seq1025 93.3 3e-14 seq88 93.3 3e-14 seq13 91.5 1e-13 seq464 89.7 4e-13 seq121 87.8 1e-12 >seq27 Length=1763170 Score = 102 bits (112), Expect = 7e-17 Identities = 152/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || || | ||| || ||||| ||||| || || ||||||||||| | ||| | ||||| Sbjct 581108 AGGACGAGATGGAGGGTGGATTCCTTCTGGATATTGTAGTCGGCAAGGGTGCGGCCGTCC 581049 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 || | || ||||| ||| | || || ||||| ||||| || | |||||| ||||| Sbjct 581048 TCGAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCT 580989 Query 16844 GCAA--TTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || ||||| ||| || | | | | || ||| || |||| || | |||||||| Sbjct 580988 TGAATCTTTGC--CTTAACGTTGTCGATGGTATCGGAGGACTCCACCTCAAGGGTGATGG 580931 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 | || ||||| || || ||||| || |||||||| Sbjct 580930 TCTTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 580897 Score = 96.9 bits (106), Expect = 3e-15 Identities = 152/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| ||| || ||||| ||||| || |||||||| || |||| ||| | | ||| Sbjct 581563 AGCACCAGATGAAGAGTGGATTCCTTCTGAATGTTGTAATCCGCCAGGGTGCGGCCATCC 581504 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 |||| || || || ||| | || | ||||| ||||| ||| | ||||| ||||| Sbjct 581503 TCCAGCTGCTTACCAGCAAAGATCAAACGCTGCTGGTCTGGAGGAATACCCTCCTTGTCC 581444 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTC-CGTT-TCCACGGTGATGG 16901 ||||| |||||| | | | | || || || |||| || || | |||||||| Sbjct 581443 TGAATTTTGGCCTTCACATTGTCAATCGTATC--CGAGCTCTCGACCTCAAGGGTGATGG 581386 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 | || || || || ||||||||||| |||||||| Sbjct 581385 TCTTCCCAGTGAGGGTTTTGACAAAGATCTGCAT 581352 Score = 86.0 bits (94), Expect = 5e-12 Identities = 158/230 (69%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767 ||| || || || | || || | ||| ||||| || |||||||| ||||||||||| || Sbjct 581351 CCCACCACGGAGGCGGAGGACGAGATGGAGCGTAGATTCCTTTTGGATGTTGTAGTCCGC 581292 Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827 | ||| | | ||||| | ||| ||||| || | || |||| ||| ||||| || Sbjct 581291 TAAGGTGCGGCCATCCTCGAGTTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCTGGGGG 581232 Query 16828 CACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCC 16885 | ||||| || || || || || ||| || | | | | |||||| | ||| Sbjct 581231 AATTCCCTCCTTATCCTGGATCTTAGC--CTTGACATTGTCGATGGTGTCGGAGCTCTCG 581174 Query 16886 GTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| ||| ||||| || ||||| || || ||||| || |||||||| Sbjct 581173 ACCTCCAGGGTAATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 581124 >seq129 Length=753513 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767 ||| || || |||| || |||| ||| || || ||||||||||| ||||| ||||| || Sbjct 556227 CCCACCCCGAAGCCGGAGGACCAAATGAAGAGTAGACTCCTTTTGAATGTTATAGTCCGC 556286 Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827 || || | ||||||| ||||| || ||| | || |||| ||| || ||| || Sbjct 556287 CAGCGTGCGCCCATCCTCCAGCTGTTTACCAGCAAAGATGAGCCTCTGCTGATCCGGGGG 556346 Query 16828 CACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGT 16887 | |||||| ||||| ||| | |||||| | | | |||||| | ||| Sbjct 556347 AATGCCCTCCTTGTCCTGAATCTTAGCCTTCACATTATCAATCGTGTCGGAGCTCTCAAC 556406 Query 16888 TTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||||| |||||||| || || || || || || ||||| |||||||| Sbjct 556407 TTCCAGAGTGATGGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCAT 556454 >seq1025 Length=71329 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || || | ||| || ||||||||||| |||||||||||||| || | ||| | ||||| Sbjct 8489 AGGACGAGATGGAGGGTGGACTCCTTCTGTATGTTGTAGTCAGCGAGGGTCCGGCCGTCC 8430 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGT-C 16842 || | || || || || | || || ||||| |||||| ||| | |||||| |||| | Sbjct 8429 TCGAGCTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCC 8370 Query 16843 GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGT 16902 | | ||| | ||| || | | | | |||||| | |||| || | |||||| || Sbjct 8369 TGGATCTTGGT-CTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGT 8311 Query 16903 TTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || || || || || || || || |||||||| Sbjct 8310 CTTCCCCGTGAGGGTCTTCACGAAGATCTGCAT 8278 >seq88 Length=981168 Score = 93.3 bits (102), Expect = 3e-14 Identities = 147/209 (70%), Gaps = 4/209 (2%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || ||||||||||| || |||||||||||||| | ||| | ||||||| | || Sbjct 85026 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGC 85085 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTT 16850 || || || | || || ||||| || ||| || | |||||| ||||| || || Sbjct 85086 TTTCCGGCGAAGATGAGGCGCTGCTGATCCGGCGGGATGCCCTCCTTGTCCTGGATCTTG 85145 Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910 || ||| || | | | | ||||| | ||| || | ||||||||| || |||| Sbjct 85146 GC--CTTGACGTTGTCGATCGTGTCCGAAGACTCGACCTCGAGGGTGATGGTCTTGCCGG 85203 Query 16911 TCAGCGTTTTGACAAAAATCTGCATTTTG 16939 | || || |||||||| |||||||| ||| Sbjct 85204 TGAGGGTCTTGACAAAGATCTGCATCTTG 85232 >seq13 Length=2550137 Score = 91.5 bits (100), Expect = 1e-13 Identities = 152/218 (70%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || || | ||| || ||||||||||| || |||||||||||||| | ||| | |||| Sbjct 1356608 AGGACGAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCT 1356667 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 || | ||||| || || | || || ||||| |||||| || | |||||| ||||| Sbjct 1356668 TCGAGCTGTTTTCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 1356727 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || || ||| || | | | | ||||| || ||| || | |||||||| Sbjct 1356728 TGGATCTTGGC--CTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGGGTGATGG 1356785 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939 | || || || || || || || || |||||||| ||| Sbjct 1356786 TCTTGCCCGTGAGGGTCTTCACGAAGATCTGCATCTTG 1356823 >seq464 Length=225985 Score = 89.7 bits (98), Expect = 4e-13 Identities = 163/232 (70%), Gaps = 9/232 (4%) Strand=Plus/Plus Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767 |||||| || || | || |||| || || |||||||||||||| ||||| || ||||| Sbjct 137821 CCCTCCACGAAGGCGGAGAACCAGGTGGAGAGTGGACTCCTTTTGGATGTTATAATCGGC 137880 Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827 | ||| | ||||||| | ||| ||||| || | || || ||||| |||||| || Sbjct 137881 GAGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCC-GGGG 137939 Query 16828 CACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTC- 16884 | ||| || || || || || || ||| || | | | | |||| ||| |||| Sbjct 137940 GATGCCTTCCTTATCCTGGATCTTGGC--CTTGACGTTGTCGATCGTGT--CCGAGCTCT 137995 Query 16885 CG-TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || |||| |||||| || || ||||| || || ||||| || || ||||| Sbjct 137996 CGACCTCCAAGGTGATCGTCTTGCCGGTGAGGGTCTTGACGAAGATTTGCAT 138047 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767 ||| || || || | || |||| ||| || ||||||||||| || || ||||||||||| Sbjct 137593 CCCACCGCGGAGGCGGAGCACCAGATGGAGGGTGGACTCCTTCTGAATATTGTAGTCGGC 137652 Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827 | || || ||||||| | || || || || | || |||| ||| |||||| || Sbjct 137653 GAGCGTCCTGCCGTCCTCAAGCTGCTTCCCGGCGAAGATCAGCCTCTGCTGGTCCGGCGG 137712 Query 16828 CACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGT 16887 | ||||| ||||| || | | |||||| | | | || || |||| Sbjct 137713 AATCCCCTCCTTGTCCTGGATCTTCGCCTTCACATTATCAATGGTATCCGAACTCTCCAC 137772 Query 16888 TTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||| | |||||| || ||||| || || || || ||||| || ||||| Sbjct 137773 TTCGAGGGTGATCGTCTTTCCCGTAAGGGTCTTCACAAATATTTGCAT 137820 >seq121 Length=770561 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| |||||||||||||||||||| ||||||||||| |||| ||| | | || Sbjct 403458 AGAACCAGGTGCAGCGTGGACTCCTTTTGGATGTTGTAGTCTGCCAGGGTGCGGCCATCG 403517 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 |||| || || || ||| | || || ||||| || || || | |||||||| || Sbjct 403518 TCCAGCTGCTTCCCAGCAAAGATCAGGCGCTGCTGATCAGGTGGGATCCCCTCTTTATCC 403577 Query 16844 GCAA--TTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || ||| ||||| | | | ||||| | ||| || | |||||| | Sbjct 403578 TGAATCTTAGCT--TTCACGTTATCAATGGTGTCTGAGCTCTCAACCTCAAGGGTGATTG 403635 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 | || ||||| || || || ||||| |||||||| Sbjct 403636 TCTTGCCGGTGAGGGTCTTCACAAAGATCTGCAT 403669 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 404691474167830