Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq77098 91.5 2e-13 seq42 89.7 6e-13 seq991 87.8 2e-12 seq68 87.8 2e-12 seq609 86.0 7e-12 seq27 86.0 7e-12 seq36107 84.2 2e-11 seq187 84.2 2e-11 seq46 84.2 2e-11 seq17610 82.4 8e-11 seq16397 82.4 8e-11 seq4822 82.4 8e-11 seq4508 82.4 8e-11 seq1621 82.4 8e-11 seq45 82.4 8e-11 >seq77098 Length=518 Score = 91.5 bits (100), Expect = 2e-13 Identities = 76/92 (83%), Gaps = 6/92 (7%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA---- 126320 ||||||| ||||||||||||||||||||||||| | ||| |||||| ||||| || Sbjct 473 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGAGAGAGG 416 Query 126321 GCGTGGGTTCGAACCCCACACCTGACAAATTA 126352 |||||||||| || ||||| ||||||| ||| Sbjct 415 GCGTGGGTTCAAATCCCACTTCTGACAACTTA 384 >seq42 Length=1500511 Score = 89.7 bits (98), Expect = 6e-13 Identities = 75/91 (82%), Gaps = 6/91 (7%) Strand=Plus/Minus Query 126263 ACAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA-- 126320 || |||||| ||||||||||||||||||||||||| | ||| |||||| ||||| || Sbjct 461407 ACGGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAGA 461350 Query 126321 --GCGTGGGTTCGAACCCCACACCTGACAAA 126349 |||||||||| || ||||| |||||||| Sbjct 461349 GGGCGTGGGTTCAAATCCCACTTCTGACAAA 461319 >seq991 Length=75790 Score = 87.8 bits (96), Expect = 2e-12 Identities = 82/102 (80%), Gaps = 3/102 (3%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGT 126324 || ||| |||||||||||||||||||||||||||||| | |||||||| || |||| Sbjct 40372 AGACAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGTTCGAAAGG--GCGT 40429 Query 126325 GGGTTCGAACCCCACACCTGACAA-ATTATTATTGGAATTTT 126365 |||||| || |||||| ||| ||| ||| | || |||||| Sbjct 40430 GGGTTCAAATCCCACAGCTGTCAAGTTTAATTTTAAAATTTT 40471 >seq68 Length=1136550 Score = 87.8 bits (96), Expect = 2e-12 Identities = 73/88 (83%), Gaps = 6/88 (7%) Strand=Plus/Plus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA----G 126321 |||||| ||||||||||||||||||||||||| | ||| |||||| ||||| || | Sbjct 369793 GTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAGAGGG 369850 Query 126322 CGTGGGTTCGAACCCCACACCTGACAAA 126349 ||||||||| || ||||| |||||||| Sbjct 369851 CGTGGGTTCAAATCCCACTTCTGACAAA 369878 >seq609 Length=162872 Score = 86.0 bits (94), Expect = 7e-12 Identities = 72/87 (83%), Gaps = 6/87 (7%) Strand=Plus/Minus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA----G 126321 |||||| ||||||||||||||||||||||||| | ||| |||||| ||||| || | Sbjct 27383 GTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGAGAGAGGG 27326 Query 126322 CGTGGGTTCGAACCCCACACCTGACAA 126348 ||||||||| || ||||| ||||||| Sbjct 27325 CGTGGGTTCAAATCCCACTTCTGACAA 27299 >seq27 Length=1763170 Score = 86.0 bits (94), Expect = 7e-12 Identities = 84/105 (80%), Gaps = 9/105 (9%) Strand=Plus/Plus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA----G 126321 |||||| ||||||||||||||||||||||||| | ||| |||||| ||||| || | Sbjct 1321643 GTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAGAGGG 1321700 Query 126322 CGTGGGTTCGAACCCCACACCTGACAAATTATTATTGGAATTTTT 126366 ||||||||| || ||||| ||||| | ||| | ||| |||||| Sbjct 1321701 CGTGGGTTCAAATCCCACTTCTGAC-ATTTAATTTTG--ATTTTT 1321742 >seq36107 Length=934 Score = 84.2 bits (92), Expect = 2e-11 Identities = 71/86 (83%), Gaps = 6/86 (7%) Strand=Plus/Minus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA----G 126321 |||||| ||||||||||||||||||||||||| | ||| |||||| ||||| || | Sbjct 848 GTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAGAGGG 791 Query 126322 CGTGGGTTCGAACCCCACACCTGACA 126347 ||||||||| || ||||| |||||| Sbjct 790 CGTGGGTTCAAATCCCACTTCTGACA 765 >seq187 Length=554302 Score = 84.2 bits (92), Expect = 2e-11 Identities = 75/93 (81%), Gaps = 6/93 (6%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA---- 126320 ||||||| |||||||||||||||||||||||| | ||| |||||| ||||| || Sbjct 20773 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGGCTCAAGTTCTGGT--CCTCGAGAGAGG 20716 Query 126321 GCGTGGGTTCGAACCCCACACCTGACAAATTAT 126353 ||||||||| || ||||| ||||||| |||| Sbjct 20715 GCGTGGGTTTAAATCCCACTTCTGACAACTTAT 20683 >seq46 Length=1439402 Score = 84.2 bits (92), Expect = 2e-11 Identities = 71/86 (83%), Gaps = 6/86 (7%) Strand=Plus/Minus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA----G 126321 |||||| ||||||||||||||||||||||||| | ||| |||||| ||||| || | Sbjct 466376 GTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAGAGGG 466319 Query 126322 CGTGGGTTCGAACCCCACACCTGACA 126347 ||||||||| || ||||| |||||| Sbjct 466318 CGTGGGTTCAAATCCCACTTCTGACA 466293 >seq17610 Length=1596 Score = 82.4 bits (90), Expect = 8e-11 Identities = 68/82 (83%), Gaps = 2/82 (2%) Strand=Plus/Minus Query 126268 CAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGTGGG 126327 ||| |||||||||||||||||||||||||||||| | |||||| || | ||||||| Sbjct 222 CAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGAAAGGGCGTGGG 165 Query 126328 TTCGAACCCCACACCTGACAAA 126349 ||| || |||||| ||| |||| Sbjct 164 TTCAAATCCCACAGCTGTCAAA 143 >seq16397 Length=1684 Score = 82.4 bits (90), Expect = 8e-11 Identities = 68/82 (83%), Gaps = 2/82 (2%) Strand=Plus/Minus Query 126268 CAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGTGGG 126327 ||| |||||||||||||||||||||||||||||| | |||||| || | ||||||| Sbjct 220 CAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGAAAGGGCGTGGG 163 Query 126328 TTCGAACCCCACACCTGACAAA 126349 ||| || |||||| ||| |||| Sbjct 162 TTCAAATCCCACAGCTGTCAAA 141 >seq4822 Length=6612 Score = 82.4 bits (90), Expect = 8e-11 Identities = 71/87 (82%), Gaps = 6/87 (7%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA---- 126320 ||||||| ||||||||||||||||||||||||| | ||| |||||| ||||| || Sbjct 2723 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAGAGG 2666 Query 126321 GCGTGGGTTCGAACCCCACACCTGACA 126347 ||||| |||| || ||||| |||||| Sbjct 2665 GCGTGTGTTCAAATCCCACTTCTGACA 2639 >seq4508 Length=7374 Score = 82.4 bits (90), Expect = 8e-11 Identities = 71/87 (82%), Gaps = 6/87 (7%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA---- 126320 ||||||| ||||||||||||||||||||||||| | ||| |||||| ||||| || Sbjct 3665 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAGAGG 3608 Query 126321 GCGTGGGTTCGAACCCCACACCTGACA 126347 |||||||||| || ||||| ||| || Sbjct 3607 GCGTGGGTTCAAATCCCACTTCTGGCA 3581 >seq1621 Length=37306 Score = 82.4 bits (90), Expect = 8e-11 Identities = 68/82 (83%), Gaps = 2/82 (2%) Strand=Plus/Plus Query 126268 CAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGTGGG 126327 ||| |||||||||||||||||||||||||||||| | |||||| || | ||||||| Sbjct 22526 CAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGGAAGGGCGTGGG 22583 Query 126328 TTCGAACCCCACACCTGACAAA 126349 ||| || |||||| ||| |||| Sbjct 22584 TTCAAATCCCACAGCTGTCAAA 22605 >seq45 Length=1452233 Score = 82.4 bits (90), Expect = 8e-11 Identities = 68/82 (83%), Gaps = 2/82 (2%) Strand=Plus/Plus Query 126268 CAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGTGGG 126327 ||| |||||||||||||||||||||||||||||| | |||||| || | ||||||| Sbjct 1351530 CAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGAAAGGGCGTGGG 1351587 Query 126328 TTCGAACCCCACACCTGACAAA 126349 ||| || |||||| ||| |||| Sbjct 1351588 TTCAAATCCCACAGCTGTCAAA 1351609 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556301732639080