Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq295 114 3e-20 seq3 104 5e-17 seq210 100 6e-16 seq31714 93.3 9e-14 seq30763 93.3 9e-14 seq507 93.3 9e-14 seq231 93.3 9e-14 seq34 93.3 9e-14 seq28 93.3 9e-14 seq8 93.3 9e-14 seq4488 91.5 3e-13 seq75 91.5 3e-13 seq24 89.7 1e-12 seq375 87.8 4e-12 seq447 86.0 1e-11 seq226 86.0 1e-11 seq79 86.0 1e-11 seq2 86.0 1e-11 >seq295 Length=381392 Score = 114 bits (126), Expect = 3e-20 Identities = 547/855 (64%), Gaps = 26/855 (3%) Strand=Plus/Plus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 ||||||||||| | ||| |||| || || || |||||||| ||||||| || || | Sbjct 144293 TCGAAGAAATTCGTCTTCCCCTGAAGCGATATCAGCTCCATCCAGTCGAATGGATTCGCC 144352 Query 251623 GCATTGTACTGCTTG--GGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCA 251680 | |||| ||| | || || || || | |||| || || ||||| ||||| | Sbjct 144353 ACCCCGTACAACTTCCCGCAT--CCCAGCGCCCCCAAGAGCCGATCCGCCACGAACTCAA 144410 Query 251681 GATACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAA-GGAATTGCCTCACAG 251739 ||||| | ||||| || |||||| || | || || || || | || || || Sbjct 144411 TGTACTGGCTCATCAAATCCCCGTTCATCCCCACCAG-CGCCACCGGCAGCGCGTCGCAA 144469 Query 251740 ATGAATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCACCTGTGCCAGAGAC 251799 | ||| ||| | ||| || |||| || || | | || | ||| | | || ||| Sbjct 144470 ACGAACTCCCTCTCGATGTCAACGGCGTCGGCGATGATCGACTTGATGCGGTCCTCAGAG 144529 Query 251800 AGCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGTCG 251859 |||||| | || ||||| ||||| | | || | ||| || ||||||||| Sbjct 144530 AGCTTGCGGTTGAGGAGGGAGTAGAGGAGGCAGGCGAAGTCGCAGTGGAGGCCCTCGTCG 144589 Query 251860 CGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCAG 251919 || ||||| ||||||||| | || || ||||| | || || ||| |||||||| Sbjct 144590 CGGGAGATGAGCTCGTTGGAGAAGGTGAGACCCGGCATGAGGCCGCGCTTCTTGAGCCAG 144649 Query 251920 AAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATGCAACAAGG 251979 ||||| | ||| ||||| || ||||| | | ||||| || | | ||||| || Sbjct 144650 AAGATAGAGCAGAAGGAGCCGGAGAAGAAGATCCCCTCAACGGCGGCAAACGCAACTAGA 144709 Query 251980 CGCTCAGCAAACGACTTGTCCTGCGACAAGA---ACTTCTGTGCCCATGCTGCCTTCTTT 252036 ||||| || || || | | | ||| || || | ||||| |||||||| Sbjct 144710 CGCTCGGCGAAGGATTCGGC---GGACCCGATCCACCGAAGGGCCCACTGGGCCTTCTTG 144766 Query 252037 CCAACCGCGGGGATTGTTTCGATTGCATCAAAGAGAGAGTTC-CGCTCGGCATCGTCCTC 252095 || || |||| || |||| || || || | | || ||| | |||| Sbjct 144767 GTCACTGCCGGGACGGTCTCGACGGCGCGGAAAAG-GCGATCTTTTTCGTCTGGATCCTT 144825 Query 252096 GATGAGCGCATCAAGCAGGAGAGAGTACATCTCCGAATGGATGGATTCGTTGAACATCTG 252155 |||| | || || ||||| ||||||||||| || |||||| ||| | ||||| Sbjct 144826 GATGTAGGATTCGAGGAGGAGGGAGTACATCTCGGAGTGGATGTTCTCGATCGCGATCTG 144885 Query 252156 GTAAGCATAGAATAGACGCGCGGAAGGG---TCGGTGACTTCCGTGGAAAAGTTGTTTGC 252212 | | | |||| || |||| | || || | ||| || | ||| | | || Sbjct 144886 GAAGCCGTAGA--AGGCGCGGGCCTCGGGAATCTG-GACGTCGGACATGAAGCGGATGGC 144942 Query 252213 AATGTTCTCCATCACCATGCCATCGCTGCCTGCAAAGAAGCCAAGAATGGTCTTGATGAA 252272 | |||||| | || ||||||||| | | || |||||| | || ||| |||||| Sbjct 144943 GAGGTTCTCGAGGACGATGCCATCGGAGGCGGCGAAGAAGGCGAGGATGTGGGAGATGAA 145002 Query 252273 GTGACGCTCATCGTCGTTGAGCTTGTCACGCCAGTCGGCAATGTC-CTGATTCAGAGG-- 252329 ||| |||||||||| | |||| || |||||| || | ||| ||| ||||| Sbjct 145003 GTGGCGCTCATCGTTGGTGAGGGAGTGGAGCCAGTGGGGGAGGTCACTG---GAGAGGTC 145059 Query 252330 AACTTCTTCCACCGTCCAGAATGTGGACACCGCCTTCTTGTACATTGCGAACACATCAGG 252389 || || || | ||||| || | || | |||||||||||||| | |||| | || Sbjct 145060 GACCTCCTCGGCGGTCCAAAAGGAGGCGAGGGCCTTCTTGTACATCTCCCACACCTGGGG 145119 Query 252390 GTACTTGATTGGGAA 252404 ||| ||| ||||| Sbjct 145120 GTAGCGGATAGGGAA 145134 >seq3 Length=3346983 Score = 104 bits (114), Expect = 5e-17 Identities = 110/145 (76%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 218657 AGGTCGCTCAGTTTTCTGGTTATGTATCCGAAATTTCTGGCTACCATCACGGTGAGCAGA 218716 |||| ||||| |||||||||||||| || ||| ||| | ||||||||| |||||||||| Sbjct 1186472 AGGTTGCTCAATTTTCTGGTTATGTTTCGGAACATTCAGCCTACCATCATGGTGAGCAGA 1186413 Query 218717 GTCTGCAGGGTGCCATTGTAGGCATGGCACAGGACTATGTGGGCAGTAACAACATGAACT 218776 |||| | ||||| | || ||||| || || | ||| || || |||||||| ||| Sbjct 1186412 GTCTTGCTAGCACCATTATTGGAATGGCTCAAGATTTTGTTGGTAGCAACAACATTAACC 1186353 Query 218777 TGCTGCTCCCCAACGGTCAGTTTGG 218801 | |||| || || || || ||||| Sbjct 1186352 TTCTGCAACCTAATGGACAATTTGG 1186328 >seq210 Length=498004 Score = 100 bits (110), Expect = 6e-16 Identities = 371/572 (65%), Gaps = 22/572 (4%) Strand=Plus/Plus Query 251844 GTGCAGACCCTCGTCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCC 251903 ||| || ||||||||||| ||||| ||||||||| | | ||||| ||||| | || Sbjct 322144 GTGGAGGCCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAAGTGAGGCCCGGCATGAGGCC 322203 Query 251904 ACGGTTCCTGAGCCAGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACA 251963 || ||| ||||||||||||| | ||| ||||| || ||||| | | || || ||| Sbjct 322204 TCGCTTCTTGAGCCAGAAGATGGAGCAGAAGGAGCCGGAGAAGAAGATCCCTTCAACAGC 322263 Query 251964 CACCCATGCAACAAGGCGCTCAGCAAACGACTTGTCCTGCGACAAGA---ACTTCTGTGC 252020 | | || || |||||||| || || || |||| ||| || || | || Sbjct 322264 GGCGAAGGCCACGAGGCGCTCCGCGAAAGA---GTCCGAGGACTGGATCCACCGGAGCGC 322320 Query 252021 CCATGCTGCCTTCTTTCCAACCGCGGGGATTGTTTCGATTGCATCAAAGAGAGAGTTCCG 252080 ||| |||||||| | ||||| || | || |||| ||| ||| || || | Sbjct 322321 CCACTGGGCCTTCTTCGCCACCGCCGGAACCGTCTCGACGGCACGAAAAAGGCGGTCCTT 322380 Query 252081 CTCGGCATCGTCCTCGATGAGCGCATCAAGCAGGAGAGAGTACATCTCCGAATGGATGGA 252140 ||| || ||| | |||| | || |||| ||||| |||| ||| || |||||| Sbjct 322381 TTCGTCAGGGTCTTTGATGTAGGATTCCAGCAAAAGAGAATACAACTCGGAGTGGATGTT 322440 Query 252141 TTCGTTGAACATCTGGTAAGCATAGAATAGACGCGCGGAAGGGTCGGTGA-CT-TCCGT- 252197 |||| || |||||| | | || | | |||||| | |||| || || ||| Sbjct 322441 TTCGATGGCTATCTGGAAGCCGTA----AAAGGCGCGG--GCCTCGGCGATCTGGACGTC 322494 Query 252198 GGA---AAAGTTGTTTGCAATGTTCTCCATCACCATGCCATCGCTGCCTGCAAAGAAGCC 252254 ||| ||| | || | |||||| | || || || || | | || |||||| | Sbjct 322495 GGACATGAAGCGGGCGGCTAGGTTCTCGAGGACGATACCGTCAGAGGCGGCGAAGAAGGC 322554 Query 252255 AAGAATGGTCTTGATGAAGTGACGCTCATCGTCGTTGAGCTTGTCACGCCAGTCGGCAAT 252314 || | | ||||||||| ||||| ||| | |||| ||| |||||| || | Sbjct 322555 GAGGACGTGGGAGATGAAGTGGCGCTCGTCGGGGGTGAGGGTGTGGAGCCAGTGGGGGAG 322614 Query 252315 GTCCTGATTCAGAGG--AACTTCTTCCACCGTCCAGAATGTGGACACCGCCTTCTTGTAC 252372 ||| | ||||| || || || | |||||||| | || || |||||||||||| Sbjct 322615 GTC--GGCGGAGAGGTCGACCTCCTCGGCTGTCCAGAAAGAGGCGACGGCCTTCTTGTAC 322672 Query 252373 ATTGCGAACACATCAGGGTACTTGATTGGGAA 252404 || | |||| | || ||| ||| ||||| Sbjct 322673 ATCTCCCACACCTGGGGATACCGGATCGGGAA 322704 >seq31714 Length=1030 Score = 93.3 bits (102), Expect = 9e-14 Identities = 60/66 (91%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| |||||||||||||||||||| || ||||||| || ||||||||||||||||| Sbjct 335 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 394 Query 142563 CCCCAC 142568 |||||| Sbjct 395 CCCCAC 400 >seq30763 Length=1053 Score = 93.3 bits (102), Expect = 9e-14 Identities = 60/66 (91%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| |||||||||||||||||||| || ||||||| || ||||||||||||||||| Sbjct 342 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 401 Query 142563 CCCCAC 142568 |||||| Sbjct 402 CCCCAC 407 >seq507 Length=203899 Score = 93.3 bits (102), Expect = 9e-14 Identities = 60/66 (91%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| |||||||||||||||||||| || ||||||| || ||||||||||||||||| Sbjct 47558 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 47617 Query 142563 CCCCAC 142568 |||||| Sbjct 47618 CCCCAC 47623 >seq231 Length=464193 Score = 93.3 bits (102), Expect = 9e-14 Identities = 60/66 (91%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| |||||||||||||||||||| || ||||||| || ||||||||||||||||| Sbjct 182956 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 182897 Query 142563 CCCCAC 142568 |||||| Sbjct 182896 CCCCAC 182891 >seq34 Length=1605203 Score = 93.3 bits (102), Expect = 9e-14 Identities = 60/66 (91%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| |||||||||||||||||||| || ||||||| || ||||||||||||||||| Sbjct 370513 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 370572 Query 142563 CCCCAC 142568 |||||| Sbjct 370573 CCCCAC 370578 >seq28 Length=1713734 Score = 93.3 bits (102), Expect = 9e-14 Identities = 60/66 (91%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| |||||||||||||||||||| || ||||||| || ||||||||||||||||| Sbjct 1247378 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 1247319 Query 142563 CCCCAC 142568 |||||| Sbjct 1247318 CCCCAC 1247313 >seq8 Length=2709044 Score = 93.3 bits (102), Expect = 9e-14 Identities = 60/66 (91%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| |||||||||||||||||||| || ||||||| || ||||||||||||||||| Sbjct 1385674 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 1385615 Query 142563 CCCCAC 142568 |||||| Sbjct 1385614 CCCCAC 1385609 >seq4488 Length=7446 Score = 91.5 bits (100), Expect = 3e-13 Identities = 107/145 (74%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 218657 AGGTCGCTCAGTTTTCTGGTTATGTATCCGAAATTTCTGGCTACCATCACGGTGAGCAGA 218716 |||| ||||| || ||||||||||| || || ||| | ||||||||| ||||| |||| Sbjct 3318 AGGTTGCTCAATTCTCTGGTTATGTTTCAGAGCATTCGGCCTACCATCATGGTGAACAGA 3259 Query 218717 GTCTGCAGGGTGCCATTGTAGGCATGGCACAGGACTATGTGGGCAGTAACAACATGAACT 218776 |||| | | ||| | || ||||| || |||| ||| || || |||||||| ||| Sbjct 3258 GTCTTGCTAGCACTATTATTGGAATGGCTCAAGACTTTGTTGGTAGCAACAACATAAACC 3199 Query 218777 TGCTGCTCCCCAACGGTCAGTTTGG 218801 | |||| || || || || ||||| Sbjct 3198 TTCTGCAACCTAATGGACAATTTGG 3174 >seq75 Length=1071363 Score = 91.5 bits (100), Expect = 3e-13 Identities = 59/65 (91%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||| |||||||||||||||||||| || ||||||| || |||||||||||||||||| Sbjct 135578 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 135637 Query 142564 CCCAC 142568 ||||| Sbjct 135638 CCCAC 135642 >seq24 Length=1871300 Score = 89.7 bits (98), Expect = 1e-12 Identities = 60/67 (90%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 142502 TAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGA 142561 ||||||| |||||||| ||||||||||| || ||||||| || |||||||||||||||| Sbjct 88051 TAGCCCGTCTAGCTCAGCCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGA 87992 Query 142562 GCCCCAC 142568 ||||||| Sbjct 87991 GCCCCAC 87985 >seq375 Length=295418 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 111659 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 111600 Query 142563 CCCCAC 142568 |||||| Sbjct 111599 CCCCAC 111594 >seq447 Length=237168 Score = 86.0 bits (94), Expect = 1e-11 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||| ||||||||| |||||||||| || ||||||| || |||||||||||||||||| Sbjct 233646 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 233587 Query 142564 CCCAC 142568 ||||| Sbjct 233586 CCCAC 233582 >seq226 Length=477463 Score = 86.0 bits (94), Expect = 1e-11 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||| ||||||||| |||||||||| || ||||||| || |||||||||||||||||| Sbjct 196471 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 196412 Query 142564 CCCAC 142568 ||||| Sbjct 196411 CCCAC 196407 >seq79 Length=1054456 Score = 86.0 bits (94), Expect = 1e-11 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||| ||||||||| |||||||||| || ||||||| || |||||||||||||||||| Sbjct 170170 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 170229 Query 142564 CCCAC 142568 ||||| Sbjct 170230 CCCAC 170234 >seq2 Length=3709472 Score = 86.0 bits (94), Expect = 1e-11 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||| ||||||||| |||||||||| || ||||||| || |||||||||||||||||| Sbjct 1615955 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 1616014 Query 142564 CCCAC 142568 ||||| Sbjct 1616015 CCCAC 1616019 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1026779092656597