Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq27 89.7 4e-13 seq121 84.2 2e-11 >seq27 Length=1763170 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| || ||| | ||||| | || || || ||||| ||| | || || | | Sbjct 581352 ATGCAGATCTTTGTCAAAACCCTCACTGGGAAGACCATCACCCTTGAGGTCGAGAGCTCG 581411 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || ||| | | | || | ||| |||||| || || |||||| | ||| | |||| Sbjct 581412 GATACGATTGACAATGTGAAGGCCAAAATTCAGGACAAGGAGGGTATTCCTCCAGACCAG 581471 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 ||| | | ||||||||||| || || || || ||| || |||| |||||||| Sbjct 581472 CAGCGTTTGATCTTTGCTGGTAAGCAGCTGGAGGATGGCCGCACCCTGGCGGATTACAAC 581531 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGT 22042 |||||||||||||| ||||||||| |||| Sbjct 581532 ATTCAGAAGGAATCCACTCTTCATCTGGT 581560 >seq121 Length=770561 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| || ||| | || || || ||||| || || || || |||| ||| | | Sbjct 403213 ATGCAGATCTTTGTAAAGACTTTGACGGGGAAGACGATCACTTTGGAGGTGGAGAGCTCC 403154 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || | ||| ||| ||| ||||| || || | |||| | || Sbjct 403153 GACACCATCGATAATGTCAAGGCAAAGATTCAGGATAAGGAAGGAATCTCTGTGGATCAG 403094 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 ||| | |||||||||||||| || || || |||||| | || |||| |||||||| Sbjct 403093 CAGCGTCTTATCTTTGCTGGAAAGCAGCTCGAAGATGCACGCACGCTGGCAGATTACAAC 403034 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGT 22042 |||||||||||||| || ||||| |||| Sbjct 403033 ATTCAGAAGGAATCCACCCTTCACCTGGT 403005 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357774244727218