Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq129 111 1e-19 seq121 105 6e-18 seq27 89.7 4e-13 seq474 87.8 2e-12 >seq129 Length=753513 Score = 111 bits (122), Expect = 1e-19 Identities = 144/198 (73%), Gaps = 1/198 (1%) Strand=Plus/Plus Query 114185 CGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACC 114244 ||| || ||||| || ||||||||||| || ||| || ||| ||||||||||| || Sbjct 556485 CGTTGACTCTTTCTGGATGTTGTAATCAGCCAAAGTGCGGCCATCCTCAAGTTGTTTGCC 556544 Query 114245 AGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTT 114304 ||| ||||||| | ||| |||||||| |||||||| || ||||| |||||| || Sbjct 556545 AGCAAAGATGAGCCTCTGCTGGTCCGGGGGAATGCCCTCCTTGTCTTGAATCTTAGCCTT 556604 Query 114305 TAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGT 114364 | | |||| ||||| | | || || |||| ||| | || ||||| || || || Sbjct 556605 CACATTATCAATCGTGTC-GAGCTCTCAACTTCCAGGGTGATGGTCTTGCCAGTAAGGGT 556663 Query 114365 TTTTACAAAAATCTGCAT 114382 || ||||| |||||||| Sbjct 556664 CTTCACAAAGATCTGCAT 556681 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 114174 ACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCA 114233 || ||||| | ||||| || ||||||||||| || || || || || ||| || Sbjct 556246 ACCAAATGAAGAGTAGACTCCTTTTGAATGTTATAGTCCGCCAGCGTGCGCCCATCCTCC 556305 Query 114234 AGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCA 114293 || ||||||||||| ||||||| | ||| || ||||| |||||||| || ||||| | Sbjct 556306 AGCTGTTTACCAGCAAAGATGAGCCTCTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGA 556365 Query 114294 ATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTG 114353 ||||| || | | |||| ||||||| | || || |||| || | || ||| Sbjct 556366 ATCTTAGCCTTCACATTATCAATCGTGTCGGAGCTCTCAACTTCCAGAGTGATGGTCTTG 556425 Query 114354 CCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || || || || || ||||| ||||||||| Sbjct 556426 CCAGTGAGGGTCTTCACAAAGATCTGCATG 556455 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/199 (71%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATC-GCTCATAGTACGAGAATCTTCAAGTTGTTTACC 114244 || || ||||| || || ||||| || ||| | ||| ||| ||| ||||||||||| || Sbjct 556713 GTTGACTCTTTCTGGATATTGTAGTCAGCTAA-AGTGCGACCATCCTCAAGTTGTTTGCC 556771 Query 114245 AGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTT 114304 || | ||||| | ||| ||||| || |||||||| || || || || ||| | | Sbjct 556772 GGCAAATATGAGCCTCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGGAT-TTTGGCCT 556830 Query 114305 TAGC-TGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAG 114363 || | | |||| ||||| | | || || || | ||| | || ||||| || |||| Sbjct 556831 TAACATTATCAATTGTGTCCGAGCTCTCAACTTCAAGGGTGATGGTCTTGCCTGTGAGAG 556890 Query 114364 TTTTTACAAAAATCTGCAT 114382 | || ||||| |||||||| Sbjct 556891 TCTTAACAAAGATCTGCAT 556909 >seq121 Length=770561 Score = 105 bits (116), Expect = 6e-18 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || ||||| || |||||||||||||| || || || | |||||| || || || ||| Sbjct 403017 GTGGATTCCTTCTGAATGTTGTAATCTGCCAGCGTGCGTGCATCTTCGAGCTGCTTTCCA 403076 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || |||| |||||||| || ||| || || ||||| || || ||||||| || Sbjct 403077 GCAAAGATAAGACGCTGCTGATCCACAGAGATTCCTTCCTTATCCTGAATCTTTGCCTTG 403136 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | |||||||| | || || |||| || | ||| || || |||| ||| Sbjct 403137 ACATTATCGATGGTGTCGGAGCTCTCCACCTCCAAAGTGATCGTCTTCCCCGTCAAAGTC 403196 Query 114366 TTTACAAAAATCTGCATG 114383 |||||||| ||||||||| Sbjct 403197 TTTACAAAGATCTGCATG 403214 Score = 82.4 bits (90), Expect = 6e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || |||||||| |||||||||||||| | ||| | | ||| || || || || ||| Sbjct 402789 GTGGATTCTTTCTGAATGTTGTAATCTGCAAGAGTGCAACCATCCTCCAGCTGCTTCCCA 402848 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || | ||||| ||||| || ||||| | ||||| || ||||| ||||||| || Sbjct 402849 GCAAAAATGAGGCGCTGCTGATCCGGGGATATGCCCTCCTTGTCCTGAATCTTTGCCTTC 402908 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | ||||| | || || |||| || | || || || || ||||| Sbjct 402909 ACATTATCGATAGTGTCAGAACTCTCCACCTCCAAAGTAATGGTCTTCCCTGTAAGAGTC 402968 Query 114366 TTTACAAAAATCTGCATG 114383 || ||||| ||||||||| Sbjct 402969 TTCACAAAGATCTGCATG 402986 >seq27 Length=1763170 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || ||||| || |||||||||||||| || || || ||| || || || |||||| Sbjct 581548 GTGGATTCCTTCTGAATGTTGTAATCCGCCAGGGTGCGGCCATCCTCCAGCTGCTTACCA 581489 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || |||| | |||||| ||||| |||||||| || || ||||| ||| || || Sbjct 581488 GCAAAGATCAAACGCTGCTGGTCTGGAGGAATACCCTCCTTGTCCTGAATTTTGGCCTTC 581429 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| || || | | ||||| || | ||| | || || || || || ||| Sbjct 581428 ACATTGTCAATCGTATCCGAGCTCTCGACCTCAAGGGTGATGGTCTTCCCAGTGAGGGTT 581369 Query 114366 TTTACAAAAATCTGCAT 114382 || ||||| |||||||| Sbjct 581368 TTGACAAAGATCTGCAT 581352 >seq474 Length=218880 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 ||||| || || || |||||||||||| | || || || || || || || || Sbjct 25105 GTAGACTCCTTCTGGATGTTGTAATCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTTCCG 25164 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| ||||||| ||||| ||||| || || ||||| || ||||| ||||| || Sbjct 25165 GCGAAGATGAGGCGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTG 25224 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | |||||||| ||| || || || | ||| | || || || ||||| || Sbjct 25225 ACGTTGTCGATGGTGTCGGAGGACTCCACCTCGAGGGTGATAGTCTTCCCCGTCAGGGTC 25284 Query 114366 TTTACAAAAATCTGCATG 114383 || || || ||||||||| Sbjct 25285 TTCACGAAGATCTGCATG 25302 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419723145797004