Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= NC_009812.1 Length=42653 Score E Sequences producing significant alignments: (Bits) Value seq13815 96.9 9e-16 >seq13815 Length=1928 Score = 96.9 bits (106), Expect = 9e-16 Identities = 174/252 (69%), Gaps = 2/252 (1%) Strand=Plus/Minus Query 8869 AAATTGCAGCTACAGTTTTAAATGCGTTCAAGGATGATAATTTGAGCGTGGCGGATGCGG 8928 ||||||| | || | | | |||||||| | || ||||||| | || | ||||||| Sbjct 1910 AAATTGCTTCGACTGCTCTTAATGCGTTTAGGGCTGATAATCTATCAGTAACCGATGCGG 1851 Query 8929 CAAACATTCTAGCTGGTGCAGCAAATGCTTCTGCCACAGGTGTAGAAGAAATG-AAGATG 8987 | || | |||||||||| |||||||| || || || |||| | |||||| || | | Sbjct 1850 CCAATCTCTTAGCTGGTGCTGCAAATGCATCGGCAACTAATGTAAAGGAAATGCAATACG 1791 Query 8988 TCTTTACAACAAGTTTCTGCTGTTGCCAGTGGCGTTGGTCTCTCATTTGACGATACATCA 9047 || ||| |||||||| || || ||| || ||| | ||| | |||||| | Sbjct 1790 GATTATCAATG-GTTTCTGCAGTAGCATCTGGAGTCGGTTTGAGTTTTAAGGATACAACT 1732 Query 9048 ACAATGTTAGCAGTATTTGCGCAGAATGGTTTAAAAGGTTCTGATGCAGGTACCTCTCTA 9107 || ||||| ||||||| || || || | || || ||||||||||| ||| || Sbjct 1731 ACTGCCCTAGCATTATTTGCCCAAAACGGGCTTCGCGGATCGGATGCAGGTACATCTTTA 1672 Query 9108 AAAACGATGCTA 9119 ||||| |||||| Sbjct 1671 AAAACAATGCTA 1660 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 136237937059710