Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= NC_009813.1 Length=48172 Score E Sequences producing significant alignments: (Bits) Value seq4841 178 4e-40 >seq4841 Length=6572 Score = 178 bits (196), Expect = 4e-40 Identities = 200/266 (75%), Gaps = 9/266 (3%) Strand=Plus/Minus Query 45984 AAAATTAATCCGGCTGCATATAATCCGCGTATAGATTTACAGCCCGACGATCCAGAATAT 46043 ||||| ||||| || |||||||||| ||||| ||||||||||| | ||| |||||||| Sbjct 5307 AAAATCAATCCTGCACCATATAATCCCCGTATTGATTTACAGCCGGGAGATGCAGAATAT 5248 Query 46044 CaaaaattaaaaaaaTCAATTGAAGAATTTGGCTATATTGACCCACTGATTTGGAATGAA 46103 ||| ||||||| |||| ||||| | ||||| ||| | | ||||| | |||||||| Sbjct 5247 GAAAGATTAAAACAATCGATTGAGAAGTTTGGTTATGTGCAGCCACTTGTATGGAATGAG 5188 Query 46104 AGAACTGGTAATTTAGTCGGTGGCCATCAGCGTTATAAAATTTTACTCGAGGGAAAAC-- 46161 ||||| || |||||||| ||||||||||| |||| |||||||||| | | | ||||| Sbjct 5187 AGAACAGGAAATTTAGTGGGTGGCCATCAACGTTTTAAAATTTTAGTAAATGAAAAACAA 5128 Query 46162 -CGGAAAACTTAACTGTATCAGTAGTTAACCTAGATATAGAT---CAAGAGAAAGCATTG 46217 || | || ||| |||||||| || | ||| ||| |||||||| ||||| Sbjct 5127 TTAAAAGAAGTAGATGTTTCAGTAGTGGACTTGGAT---GATTCCGAAGAGAAAACATTG 5071 Query 46218 AATATTGCGTTAAACAAGATAGAAGG 46243 ||||| | ||||| || ||||||| Sbjct 5070 AATATCACTTTAAATAAAGTAGAAGG 5045 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 153881892817836