Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq13 154 3e-32 seq27 152 1e-31 seq88 140 8e-28 seq464 136 9e-27 seq121 129 1e-24 seq241 120 7e-22 seq129 109 1e-18 seq363 84.2 5e-11 >seq13 Length=2550137 Score = 154 bits (170), Expect = 3e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||||||||| | || |||||||||| ||| || || ||||| || |||||||| Sbjct 1356592 TCCACCGCGGAGGCGGAGGACGAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGC 1356651 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 ||| ||||| |||||||| | |||||||| |||||||| || ||||| || || Sbjct 1356652 GAGGGTGCGGCCGTCTTCGAGCTGTTTTCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGG 1356711 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 ||| || || || |||||||| || || || ||||| || || | || || || || Sbjct 1356712 GATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGAC 1356771 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| ||||| || || || ||||| ||||| |||||||| Sbjct 1356772 CTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCAT 1356819 >seq27 Length=1763170 Score = 152 bits (168), Expect = 1e-31 Identities = 177/235 (75%), Gaps = 8/235 (3%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| ||||||| | | |||||||| | ||| ||| || |||||||| |||| Sbjct 581126 CATG-CCACCCCGGAGTCGAGG-ACGAGATGGAGGGTGGATTCCTTCTGGATATTGTAGT 581069 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 |||| || ||||| ||||| || | || || || || |||||||||||||| || | Sbjct 581068 CGGCAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGG---T 581012 Query 288362 CTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCG 288418 ||||| || || || || || || || || || || ||||| || || | |||| | Sbjct 581011 CTGGGGGGATGCCCTCCTTGTCTTGAATCTTTGCCTTAACGTTGTCGATGGTATCGGAGG 580952 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | || || || || ||||| ||||| ||||| |||||||||||||| |||||||| Sbjct 580951 ACTCCACCTCAAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 580897 Score = 129 bits (142), Expect = 1e-24 Identities = 170/233 (73%), Gaps = 12/233 (5%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || |||||||| | ||| ||| |||||||| || ||||| || Sbjct 581350 CCACCACGGAGGCGGAGGACGAGATGGAGCGTAGATTCCTTTTGGATGTTGTAGTCCGCT 581291 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | ||||| || || || | ||| || || ||||||||||| | ||| || |||||| Sbjct 581290 AAGGTGCGGCCATCCTCGAGTTGCTTGCCGGCGAAGATCAGCCTCTGCTGG---TCTGGG 581234 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGAT 288420 ||||| || ||||||||||| || || || || || || || | ||| ||| Sbjct 581233 GGAATTCCCTCCTTATCCTGGATCTTAGCCTTGACATTGTCGATGGTGTCGGAGCTC--- 581177 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || || || ||||| ||||| || ||||||||||| |||||||| Sbjct 581176 TCGACCTCCAGGGTAATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 581124 >seq88 Length=981168 Score = 140 bits (154), Expect = 8e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || |||||||| | || ||||| || | ||| || || ||||| || ||||||||| Sbjct 85002 CCGCCGCGGAGGCGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 85061 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || ||||| |||||||| || ||||| ||| ||| Sbjct 85062 AGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGGCGCTGCTGATCCGGCGGG 85121 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| || || || ||||| || || | || || || || Sbjct 85122 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAAGACTCGACC 85181 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| ||||| ||||| || |||||||| || |||||||| Sbjct 85182 TCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCAT 85228 >seq464 Length=225985 Score = 136 bits (150), Expect = 9e-27 Identities = 148/194 (76%), Gaps = 7/194 (4%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || |||||||| ||||| |||||||| ||||| ||||| || | ||| || || |||||| Sbjct 137858 TCCTTTTGGATGTTATAATCGGCGAGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAG 137917 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||| ||||| || | ||||| ||||| ||||||||||| || || || ||||| Sbjct 137918 ATCAGGCGCTGCTG-GTCCGGGGGATGCCTTCCTTATCCTGGATCTTGGCCTTGACGTTG 137976 Query 288403 TCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || | || |||| || || || | ||||||||||| ||||| || |||||| Sbjct 137977 TCGATCGTGTCCGAGCTC---TCGACCTCCAAGGTGATCGTCTTGCCGGTGAGGGTCTTG 138033 Query 288460 ACGAATATCTGCAT 288473 ||||| || ||||| Sbjct 138034 ACGAAGATTTGCAT 138047 Score = 127 bits (140), Expect = 5e-24 Identities = 167/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | || || ||||| | ||| || || || ||||| ||||||||| Sbjct 137594 CCACCGCGGAGGCGGAGCACCAGATGGAGGGTGGACTCCTTCTGAATATTGTAGTCGGCG 137653 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 ||||| | ||||| || | || || || ||||||||||| | ||| || || Sbjct 137654 AGCGTCCTGCCGTCCTCAAGCTGCTTCCCGGCGAAGATCAGCCTCTGCTGGTCCGGCGGA 137713 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGA---TTCT 288423 || || || || |||||||| ||||| ||||| || || || | ||| ||| || Sbjct 137714 ATCCCCTCCTTGTCCTGGATCTTCGCCTTCACATTATCAATGGTATC---CGAACTCTCC 137770 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 |||||||| ||||||||||| || || || ||||| || ||||| ||||| Sbjct 137771 ACTTCGAGGGTGATCGTCTTTCCCGTAAGGGTCTTCACAAATATTTGCAT 137820 >seq121 Length=770561 Score = 129 bits (142), Expect = 1e-24 Identities = 171/235 (73%), Gaps = 7/235 (3%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| || || | ||| | || || || || | |||| || |||||||| || |||| Sbjct 403439 CATG-CCGCCCCTGAGGCGGAGAACCAGGTGCAGCGTGGACTCCTTTTGGATGTTGTAGT 403497 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | || || ||||| || || || | || || || || |||||||| ||||| ||| | Sbjct 403498 CTGCCAGGGTGCGGCCATCGTCCAGCTGCTTCCCAGCAAAGATCAGGCGCTGCTGATCAG 403557 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCG 288418 |||||| || ||||||||||| || || ||||||||||| || || | || |||| Sbjct 403558 GTGGGATCCCCTCTTTATCCTGAATCTTAGCTTTCACGTTATCAATGGTGTCTGAGCTC- 403616 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || ||||| ||||| ||||| || ||||| || || |||||||| Sbjct 403617 --TCAACCTCAAGGGTGATTGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCAT 403669 Score = 120 bits (132), Expect = 7e-22 Identities = 169/235 (72%), Gaps = 7/235 (3%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| | || | || || || |||| ||| ||| || || || || || | Sbjct 402983 CATG-CCACCCCTCAGCCGCAGCACCAGGTGAAGGGTGGATTCCTTCTGAATGTTGTAAT 403041 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | || ||||||||| | ||||| | || ||||| || ||||| |||||||| ||| Sbjct 403042 CTGCCAGCGTGCGTGCATCTTCGAGCTGCTTTCCAGCAAAGATAAGACGCTGCTGATCCA 403101 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCG 288418 | | ||||||||| |||||||| || || || || || || || || | ||| ||| Sbjct 403102 CAGAGATTCCTTCCTTATCCTGAATCTTTGCCTTGACATTATCGATGGTGTCGGAGCTC- 403160 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || | |||||||||||||| |||| |||||| || || |||||||| Sbjct 403161 --TCCACCTCCAAAGTGATCGTCTTCCCCGTCAAAGTCTTTACAAAGATCTGCAT 403213 Score = 98.7 bits (108), Expect = 2e-15 Identities = 139/194 (72%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || || || || || || || | ||||| || || || | || ||||| || || Sbjct 403251 TCCTTCTGTATGTTGTAATCTGCTAATGTGCGGCCATCCTCGAGCTGCTTTCCAGCAAAA 403310 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||| ||||| || | || ||| || || || |||||||| || |||||||| || Sbjct 403311 ATCAGGCGCTGCTGGTCAGGTGCGATGCCCTCCTTGTCCTGGATCTTGGCTTTCACATTC 403370 Query 288403 TCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || | || |||| || || || || ||||| |||||||| || || |||||| Sbjct 403371 TCAATGGTGTCTGAGCTC---TCAACCTCAAGAGTGATGGTCTTCCCTGTAAGGGTCTTG 403427 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 403428 ACGAAGATCTGCAT 403441 >seq241 Length=450715 Score = 120 bits (132), Expect = 7e-22 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||||||||||||||||||||| || ||||| || | || || || |||||| Sbjct 239431 TCCTTCTGGATATTATAGTCGGCGAGCGTCCGGCCGTCCTCGAGCTGCTTGCCGGCGAAG 239372 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || ||||| || || ||||| || || || || ||||| || || || ||||| Sbjct 239371 ATAAGACGTTGCTGGTCCGGGGGGATGCCCTCCTTGTCTTGGATCTTGGCCTTGACGTTG 239312 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | ||| || || || || || || || ||||| ||||| || ||||| ||| Sbjct 239311 TCGATCGTATCCGAGGACTCGACCTCCAGGGTAATGGTCTTGCCGGTGAGGGTCTTCACG 239252 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 239251 AAGATCTGCAT 239241 >seq129 Length=753513 Score = 109 bits (120), Expect = 1e-18 Identities = 163/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || || ||||| | ||| ||| || ||||| |||||||| || Sbjct 556000 CCACCACGAAGACGCAGGACAAGATGGAGAGTGGATTCCTTCTGGATGTTATAGTCTGCC 556059 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || || || | || || || || || || || | ||| ||| | ||| Sbjct 556060 AGGGTACGCCCATCCTCAAGCTGCTTCCCAGCAAAAATGAGCCTCTGCTGATCAGGAGGG 556119 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || |||||||| || ||||| || || || || || || || | || |||| || Sbjct 556120 ATCCCTTCTTTGTCTTGGATCTTGGCCTTGACATTATCGATGGTGTCTGAGCTC---TCC 556176 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| || ||||| |||||||| || || ||||| || ||||||||||| Sbjct 556177 ACTTCCAGAGTGATGGTCTTCCCAGTGAGGGTCTTCACAAATATCTGCAT 556226 Score = 105 bits (116), Expect = 2e-17 Identities = 162/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | ||| | || || || |||| || ||||| |||||||| ||||| || Sbjct 556683 CCACCCCTGAGCCGCAGGACAAGGTGAAGAGTTGACTCTTTCTGGATATTGTAGTCAGCT 556742 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | ||||| || || || | |||||| || || || || || | ||| || | || Sbjct 556743 AAAGTGCGACCATCCTCAAGTTGTTTGCCGGCAAATATGAGCCTCTGCTGGTCAGGGGGA 556802 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || || || |||||||||||||| || || || || || || | || |||| || Sbjct 556803 ATGCCCTCCTTATCCTGGATTTTGGCCTTAACATTATCAATTGTGTCCGAGCTC---TCA 556859 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| || ||||| ||||| || || |||||||| || || |||||||| Sbjct 556860 ACTTCAAGGGTGATGGTCTTGCCTGTGAGAGTCTTAACAAAGATCTGCAT 556909 >seq363 Length=303632 Score = 84.2 bits (92), Expect = 5e-11 Identities = 75/94 (80%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 288380 CCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCG 288439 ||||||| || ||||| ||||| || || | ||||| || || ||||| || |||| Sbjct 182074 CCTGGATCTTGGCTTTGACGTTGTCGATGGTGTCGCTGCTCTCGACCTCGAGAGTTATCG 182133 Query 288440 TCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||||| ||||| ||||| |||||||||||||| Sbjct 182134 TCTTCCCCGTCAGCGTCTTCACGAATATCTGCAT 182167 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178440462999926