Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24]
80,317 sequences; 556,480,649 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq474 122 9e-23
seq1025 116 4e-21
seq13 116 4e-21
seq129 107 2e-18
seq27 105 7e-18
seq121 100 3e-16
seq464 96.9 4e-15
>seq474
Length=218880
Score = 122 bits (134), Expect = 9e-23
Identities = 146/196 (74%), Gaps = 2/196 (1%)
Strand=Plus/Plus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
|||||| || || |||||||| || || || || |||| || |||||||| || |||||
Sbjct 25110 CTCCTTCTGGATGTTGTAATCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAA 25169
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136
||||| ||||||||||| | || | || |||||||||| ||| || |||| |||
Sbjct 25170 GATGAGGCGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGT 25228
Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195
| | | |||||| || ||||| |||| ||||| || || ||||| || ||||| |
Sbjct 25229 TGTCGATGGTGTCGGAGGACTCCACCTCGAGGGTGATAGTCTTCCCCGTCAGGGTCTTCA 25288
Query 42196 CAAAGATTTGCATTTT 42211
| ||||| ||||| ||
Sbjct 25289 CGAAGATCTGCATGTT 25304
>seq1025
Length=71329
Score = 116 bits (128), Expect = 4e-21
Identities = 141/192 (73%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
|||||| || || ||||| ||||| || ||||| |||| || |||||||| || |||||
Sbjct 8469 CTCCTTCTGTATGTTGTAGTCAGCGAGGGTCCGGCCGTCCTCGAGCTGCTTTCCGGCGAA 8410
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136
||||| ||||||||||| | || | || |||||||||| ||| || |||| |
Sbjct 8409 GATGAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTGGTCTTGACATT 8350
Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196
| | |||||| || ||||| || | ||||| || || ||||| || ||||| ||
Sbjct 8349 GTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTCCCCGTGAGGGTCTTCAC 8290
Query 42197 AAAGATTTGCAT 42208
||||| |||||
Sbjct 8289 GAAGATCTGCAT 8278
>seq13
Length=2550137
Score = 116 bits (128), Expect = 4e-21
Identities = 145/196 (74%), Gaps = 2/196 (1%)
Strand=Plus/Plus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
|||||| || || ||||| || || || || || |||| || ||||| || || |||||
Sbjct 1356628 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCTTCGAGCTGTTTTCCGGCGAA 1356687
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136
||||| ||||||||||| | || | || |||||||||| ||| || |||| |||
Sbjct 1356688 GATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGT 1356746
Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195
| | | |||||| || || || |||| |||||||| |||||||| || ||||| |
Sbjct 1356747 TGTCGATCGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTCA 1356806
Query 42196 CAAAGATTTGCATTTT 42211
| ||||| ||||| ||
Sbjct 1356807 CGAAGATCTGCATCTT 1356822
>seq129
Length=753513
Score = 107 bits (118), Expect = 2e-18
Identities = 154/213 (72%), Gaps = 8/213 (4%)
Strand=Plus/Plus
Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059
|||||||| | || |||||||||||| || || || ||||| || ||| | || ||
Sbjct 556246 ACCAAATGAAGAGTAGACTCCTTTTGAATGTTATAGTCCGCCAGCGTGCGCCCATCCTCC 556305
Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119
||||| |||||||| || ||||| | |||||| || | || | || |||||||||| ||
Sbjct 556306 AGCTGTTTACCAGCAAAGATGAGCCTCTGCTGATCCGGGGGAATGCCCTCCTTGTCC-TG 556364
Query 42120 ATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGT 42175
| | || | || | | | | |||||| |||| || || || | ||||||||
Sbjct 556365 AATCTTAGCCTTCACATTATCAATCGTGTCGGAGCTC---TCAACTTCCAGAGTGATGGT 556421
Query 42176 TTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
||||| || || ||||| |||||||| |||||
Sbjct 556422 CTTGCCAGTGAGGGTCTTCACAAAGATCTGCAT 556454
Score = 93.3 bits (102), Expect = 5e-14
Identities = 140/195 (72%), Gaps = 7/195 (4%)
Strand=Plus/Plus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
||| || || || ||||||||||||| ||| || | || || || || || ||||| ||
Sbjct 556491 CTCTTTCTGGATGTTGTAATCAGCCAAAGTGCGGCCATCCTCAAGTTGTTTGCCAGCAAA 556550
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135
||||| | ||||||||| | || | || |||||||| | ||| | || | || |
Sbjct 556551 GATGAGCCTCTGCTGGTCCGGGGGAATGCCCTCCTTGT-CTTGAATCTTAGCCTTCACAT 556609
Query 42136 TCGCCACCGTGTC--GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193
| | | |||||| |||| || || || | |||||||| ||||| || || |||||
Sbjct 556610 TATCAATCGTGTCGAGCTC---TCAACTTCCAGGGTGATGGTCTTGCCAGTAAGGGTCTT 556666
Query 42194 TACAAAGATTTGCAT 42208
|||||||| |||||
Sbjct 556667 CACAAAGATCTGCAT 556681
>seq27
Length=1763170
Score = 105 bits (116), Expect = 7e-18
Identities = 140/192 (73%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077
||||| || |||||||| || || || || || |||| || |||||||| || || ||
Sbjct 581087 TCCTTCTGGATATTGTAGTCGGCAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCAAAG 581028
Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137
|| || ||||||||||| | || | || |||||||| | ||| | |||| | | |||
Sbjct 581027 ATCAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGT-CTTGAATCTTTGCCTTAACGTT 580969
Query 42138 G-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196
| | | || ||| || ||||| || | |||||||| ||||| || || ||||| ||
Sbjct 580968 GTCGATGGTATCGGAGGACTCCACCTCAAGGGTGATGGTCTTGCCGGTGAGAGTCTTGAC 580909
Query 42197 AAAGATTTGCAT 42208
||||| |||||
Sbjct 580908 GAAGATCTGCAT 580897
Score = 96.9 bits (106), Expect = 4e-15
Identities = 152/214 (71%), Gaps = 8/214 (4%)
Strand=Plus/Minus
Query 41999 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 42058
||||| ||| | ||| ||||| ||||| |||||||| ||||| || || | || ||
Sbjct 581561 CACCAGATGAAGAGTGGATTCCTTCTGAATGTTGTAATCCGCCAGGGTGCGGCCATCCTC 581502
Query 42059 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCAT 42118
|||||||||||||| || || | ||||||||||| | || | | |||||||||| |
Sbjct 581501 CAGCTGCTTACCAGCAAAGATCAAACGCTGCTGGTCTGGAGGAATACCCTCCTTGTCC-T 581443
Query 42119 GATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGG 42174
|| |||| | || | | | | ||| || |||| || || || | |||||||
Sbjct 581442 GAATTTTGGCCTTCACATTGTCAATCGTATCCGAGCTC---TCGACCTCAAGGGTGATGG 581386
Query 42175 TTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
| || || || || || || |||||||| |||||
Sbjct 581385 TCTTCCCAGTGAGGGTTTTGACAAAGATCTGCAT 581352
>seq121
Length=770561
Score = 100 bits (110), Expect = 3e-16
Identities = 161/230 (70%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041
|| |||||||| || | |||| || | ||| |||||| || || |||||||| ||
Sbjct 403215 CCGCCTCTTAATCGGAGGACCAGGTGGAGAGTGGACTCCTTCTGTATGTTGTAATCTGCT 403274
Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101
| || || | || || |||||||| ||||| || || || ||||||||||| | ||
Sbjct 403275 AATGTGCGGCCATCCTCGAGCTGCTTTCCAGCAAAAATCAGGCGCTGCTGGTCAGGTGCG 403334
Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCC 42158
| || |||||||||| ||| || ||| | || | | ||||| |||| ||
Sbjct 403335 ATGCCCTCCTTGTCCTGGATCTTGGCTTTCACATTCTCAATGGTGTCTGAGCTC---TCA 403391
Query 42159 ACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|| || | |||||||| || || || || ||||| || ||||| |||||
Sbjct 403392 ACCTCAAGAGTGATGGTCTTCCCTGTAAGGGTCTTGACGAAGATCTGCAT 403441
Score = 91.5 bits (100), Expect = 2e-13
Identities = 154/219 (70%), Gaps = 8/219 (4%)
Strand=Plus/Plus
Query 41994 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 42053
|||| ||||| || | ||| ||||| ||||| |||||||| ||||| || || |
Sbjct 402999 CGCAGCACCAGGTGAAGGGTGGATTCCTTCTGAATGTTGTAATCTGCCAGCGTGCGTGCA 403058
Query 42054 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTG 42113
|| || |||||||| ||||| || || || |||||||| || | | | | |||||
Sbjct 403059 TCTTCGAGCTGCTTTCCAGCAAAGATAAGACGCTGCTGATCCACAGAGATTCCTTCCTTA 403118
Query 42114 TCCATGATTTTTTGT-TTGAGCGTCGCCACCGTGTCG---CTCGATTCCACATCGACCGT 42169
||| ||| | |||| |||| | | | |||||| ||| ||||| || | ||
Sbjct 403119 TCC-TGAATCTTTGCCTTGACATTATCGATGGTGTCGGAGCTC---TCCACCTCCAAAGT 403174
Query 42170 GATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
||| || || ||||| | |||||||||||||| |||||
Sbjct 403175 GATCGTCTTCCCCGTCAAAGTCTTTACAAAGATCTGCAT 403213
>seq464
Length=225985
Score = 96.9 bits (106), Expect = 4e-15
Identities = 150/213 (70%), Gaps = 6/213 (3%)
Strand=Plus/Plus
Query 41999 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 42058
||||| ||| | ||| |||||| ||||||||||| || || || |||| |||| ||
Sbjct 137611 CACCAGATGGAGGGTGGACTCCTTCTGAATATTGTAGTCGGCGAGCGTCCTGCCGTCCTC 137670
Query 42059 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCAT 42118
|||||||| || ||||| || || | ||||||||| | || | | ||||||||||
Sbjct 137671 AAGCTGCTTCCCGGCGAAGATCAGCCTCTGCTGGTCCGGCGGAATCCCCTCCTTGTCCTG 137730
Query 42119 GATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGA---TTCCACATCGACCGTGATGGT 42175
||| || || | | | | || || ||| ||||| |||| ||||| ||
Sbjct 137731 GATCTTCGCCTTCACATTATCAATGGTATC---CGAACTCTCCACTTCGAGGGTGATCGT 137787
Query 42176 TTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|| ||||| || ||||| ||||| ||||||||
Sbjct 137788 CTTTCCCGTAAGGGTCTTCACAAATATTTGCAT 137820
Score = 91.5 bits (100), Expect = 2e-13
Identities = 141/196 (72%), Gaps = 9/196 (5%)
Strand=Plus/Plus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
||||||||| || || ||||| || || || || |||| || || ||||| || |||||
Sbjct 137857 CTCCTTTTGGATGTTATAATCGGCGAGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAA 137916
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136
|| || ||||||||||| | || | || ||||| ||| ||| || |||| |||
Sbjct 137917 GATCAGGCGCTGCTGGTCCG-GGGGATGCCTTCCTTATCCTGGATCTTGGCCTTGA-CGT 137974
Query 42137 CG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192
| | | |||||| |||| || || || | ||||| || ||||| || || ||||
Sbjct 137975 TGTCGATCGTGTCCGAGCTC---TCGACCTCCAAGGTGATCGTCTTGCCGGTGAGGGTCT 138031
Query 42193 TTACAAAGATTTGCAT 42208
| || |||||||||||
Sbjct 138032 TGACGAAGATTTGCAT 138047
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 542667434719280
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