Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq27 125 7e-24 seq121 122 9e-23 seq129 116 4e-21 seq13 100 3e-16 seq1025 95.1 1e-14 seq474 95.1 1e-14 seq464 91.5 1e-13 seq88 86.0 6e-12 >seq27 Length=1763170 Score = 125 bits (138), Expect = 7e-24 Identities = 161/221 (73%), Gaps = 1/221 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||| | || ||||| || || || ||||| || || | |||||| |||| Sbjct 581108 AGGACGAGATGGAGGGTGGATTCCTTCTGGATATTGTAGTCGGCAAGGGTGCGGCCGTCC 581049 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || ||||||||||||||| | || || ||||||||||| || || || || || || ||| Sbjct 581048 TCGAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCT 580989 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || ||| ||| || || | ||||| || ||||| || | || | |||| Sbjct 580988 TGAATCTTTGCCTTAACGTTGTCGATGGTATCGGAGGACTCCACCTCAAGGGTGATGGTC 580929 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT-TTTAATAA 64451 |||||||| | ||| || ||||| || ||||| | |||||| Sbjct 580928 TTGCCGGTGAGAGTCTTGACGAAGATCTGCATCTGTAATAA 580888 Score = 113 bits (124), Expect = 4e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 ||||| ||||||| || ||||| || |||||||||||||| || | |||||| | || Sbjct 581563 AGCACCAGATGAAGAGTGGATTCCTTCTGAATGTTGTAATCCGCCAGGGTGCGGCCATCC 581504 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || |||||||| || ||| | || | ||||||||||| |||||||| || || || || Sbjct 581503 TCCAGCTGCTTACCAGCAAAGATCAAACGCTGCTGGTCTGGAGGAATACCCTCCTTGTCC 581444 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || ||||| ||| ||| || | ||||| | || || || | || | |||| Sbjct 581443 TGAATTTTGGCCTTCACATTGTCAATCGTATCCGAGCTCTCGACCTCAAGGGTGATGGTC 581384 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || || || | ||||| || || || ||||| Sbjct 581383 TTCCCAGTGAGGGTTTTGACAAAGATCTGCAT 581352 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||| | ||| ||||| ||||| |||||||| || || | |||||| | || Sbjct 581335 AGGACGAGATGGAGCGTAGATTCCTTTTGGATGTTGTAGTCCGCTAAGGTGCGGCCATCC 581276 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || || ||||||||||| | || |||| ||||||||| || |||||||| || || || Sbjct 581275 TCGAGTTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCTGGGGGAATTCCCTCCTTATCC 581216 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| ||| || | || || | || || || | || | |||| Sbjct 581215 TGGATCTTAGCCTTGACATTGTCGATGGTGTCGGAGCTCTCGACCTCCAGGGTAATGGTC 581156 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||||| | || || ||||| || ||||| Sbjct 581155 TTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 581124 >seq121 Length=770561 Score = 122 bits (134), Expect = 9e-23 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 ||||| || |||| || ||||| || ||||||||||||||||| | ||||| || ||| Sbjct 403002 AGCACCAGGTGAAGGGTGGATTCCTTCTGAATGTTGTAATCTGCCAGCGTGCGTGCATCT 403061 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || |||||||| || ||| | || || |||||||| || || |||||||| || || Sbjct 403062 TCGAGCTGCTTTCCAGCAAAGATAAGACGCTGCTGATCCACAGAGATTCCTTCCTTATCC 403121 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || ||| ||| ||| || | || || | ||||| || | ||| | ||| Sbjct 403122 TGAATCTTTGCCTTGACATTATCGATGGTGTCGGAGCTCTCCACCTCCAAAGTGATCGTC 403181 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || || |||||||| ||||| || || ||||| Sbjct 403182 TTCCCCGTCAAAGTCTTTACAAAGATCTGCAT 403213 Score = 105 bits (116), Expect = 7e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| || || |||| || |||||||| ||||||||||||||||| | |||| | || Sbjct 402773 AAGGACAAGGTGAAGGGTGGATTCTTTCTGAATGTTGTAATCTGCAAGAGTGCAACCATC 402832 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 || |||||||| || ||| ||||||| |||||||| || || | || || || || || Sbjct 402833 CTCCAGCTGCTTCCCAGCAAAAATGAGGCGCTGCTGATCCGGGGATATGCCCTCCTTGTC 402892 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || || ||| ||| ||| || | || ||| ||||| || | ||| | ||| Sbjct 402893 CTGAATCTTTGCCTTCACATTATCGATAGTGTCAGAACTCTCCACCTCCAAAGTAATGGT 402952 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| || || | ||| || || || || ||||| Sbjct 402953 CTTCCCTGTAAGAGTCTTCACAAAGATCTGCAT 402985 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 ||||| | |||| || || || || | || || || || || |||||||||||||| Sbjct 403215 CCGCCTCTTAATCGGAGGACCAGGTGGAGAGTGGACTCCTTCTGTATGTTGTAATCTGCT 403274 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | ||||| | || || |||||||| || ||| |||| || ||||||||||| || | Sbjct 403275 AATGTGCGGCCATCCTCGAGCTGCTTTCCAGCAAAAATCAGGCGCTGCTGGTCAGGTGCG 403334 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCAC 64395 || || || || || || | | || ||||| ||| ||| | || || | || || Sbjct 403335 ATGCCCTCCTTGTCCTGGA-TCTTGGCTTTCACATTCTCAATGGTGTCTGAGCTCTCAAC 403393 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | ||| | |||||| || || | || || ||||| || ||||| Sbjct 403394 CTCAAGAGTGATGGTCTTCCCTGTAAGGGTCTTGACGAAGATCTGCAT 403441 >seq129 Length=753513 Score = 116 bits (128), Expect = 4e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||| | || ||||| || || ||||| || ||||| | ||| ||| | || Sbjct 556015 AGGACAAGATGGAGAGTGGATTCCTTCTGGATGTTATAGTCTGCCAGGGTACGCCCATCC 556074 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 ||||||||||| || ||| ||||||||| |||||| || ||||| || |||||||| ||| Sbjct 556075 TCAAGCTGCTTCCCAGCAAAAATGAGCCTCTGCTGATCAGGAGGGATCCCTTCTTTGTCT 556134 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| ||| || | || || | |||||||| | ||| | |||| Sbjct 556135 TGGATCTTGGCCTTGACATTATCGATGGTGTCTGAGCTCTCCACTTCCAGAGTGATGGTC 556194 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || || || | || || || || || ||||| Sbjct 556195 TTCCCAGTGAGGGTCTTCACAAATATCTGCAT 556226 Score = 102 bits (112), Expect = 8e-17 Identities = 151/213 (71%), Gaps = 1/213 (0%) Strand=Plus/Plus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| || || |||| ||| || ||||| || ||||||||||| || | ||||| | || Sbjct 556470 AAGGACAAGGTGAAGCGTTGACTCTTTCTGGATGTTGTAATCAGCCAAAGTGCGGCCATC 556529 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 ||||| || ||||| ||| | ||||||| ||||||||| || ||||| || || || || Sbjct 556530 CTCAAGTTGTTTGCCAGCAAAGATGAGCCTCTGCTGGTCCGGGGGAATGCCCTCCTTGTC 556589 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 ||| || || ||| ||| || | || || | || ||||| | || | ||| Sbjct 556590 TTGAATCTTAGCCTTCACATTATCAATCGTGTC-GAGCTCTCAACTTCCAGGGTGATGGT 556648 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||| || | || || || || || ||||| Sbjct 556649 CTTGCCAGTAAGGGTCTTCACAAAGATCTGCAT 556681 Score = 89.7 bits (98), Expect = 5e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || | ||||| || || || ||||||||||| || || || | |||||| | || Sbjct 556243 AGGACCAAATGAAGAGTAGACTCCTTTTGAATGTTATAGTCCGCCAGCGTGCGCCCATCC 556302 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || ||||| || || ||| | ||||||| |||||| || || ||||| || || || || Sbjct 556303 TCCAGCTGTTTACCAGCAAAGATGAGCCTCTGCTGATCCGGGGGAATGCCCTCCTTGTCC 556362 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| ||| || | || || | || ||||| | ||| | |||| Sbjct 556363 TGAATCTTAGCCTTCACATTATCAATCGTGTCGGAGCTCTCAACTTCCAGAGTGATGGTC 556422 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||| || | || || || || || ||||| Sbjct 556423 TTGCCAGTGAGGGTCTTCACAAAGATCTGCAT 556454 >seq13 Length=2550137 Score = 100 bits (110), Expect = 3e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||||| || || || || || |||||||| || |||| |||||| ||||| Sbjct 1356608 AGGACGAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCT 1356667 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || ||||| || ||||| | ||||| ||||||||||| || || || || || || || Sbjct 1356668 TCGAGCTGTTTTCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 1356727 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| || || | || || || || || || | || | |||| Sbjct 1356728 TGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGGGTGATGGTC 1356787 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 ||||| || | || || ||||| || ||||| || Sbjct 1356788 TTGCCCGTGAGGGTCTTCACGAAGATCTGCATCTT 1356822 >seq1025 Length=71329 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 |||||||| | | || || ||||| | || || || || || |||||||| || ||| Sbjct 8504 CCGCCGCGGAGGCGGAGGACGAGATGGAGGGTGGACTCCTTCTGTATGTTGTAGTCAGCG 8445 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | ||| || |||| || |||||||| ||||| | ||||| ||||||||||| ||||| Sbjct 8444 AGGGTCCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCCGGAGGG 8385 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396 || || || || || || || || ||| ||| || | || || | ||||| Sbjct 8384 ATGCCCTCCTTGTCCTGGATCTTGGTCTTGACATTGTCGATGGTGTCGGAAGACTCCACC 8325 Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | ||||| || || | || || ||||| || ||||| Sbjct 8324 TCAAGGGTGATAGTCTTCCCCGTGAGGGTCTTCACGAAGATCTGCAT 8278 >seq474 Length=218880 Score = 95.1 bits (104), Expect = 1e-14 Identities = 141/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || || ||||||||||| |||| |||||| |||| || |||||||| ||| Sbjct 25105 GTAGACTCCTTCTGGATGTTGTAATCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTTCCG 25164 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || | ||||| ||||||||||| || || || || || || || || || || ||| Sbjct 25165 GCGAAGATGAGGCGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTG 25224 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || || | || || || ||||| || | || | ||||| || |||| || Sbjct 25225 ACGTTGTCGATGGTGTCGGAGGACTCCACCTCGAGGGTGATAGTCTTCCCCGTCAGGGTC 25284 Query 64427 TTTACGAAAATTTGCATTTT 64446 || ||||| || ||||| || Sbjct 25285 TTCACGAAGATCTGCATGTT 25304 >seq464 Length=225985 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/197 (71%), Gaps = 1/197 (1%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || ||||| ||||| ||||| |||| |||||| |||| || || ||||||||| Sbjct 137852 GTGGACTCCTTTTGGATGTTATAATCGGCGAGGGTGCGGCCGTCCTCGAGTTGCTTGCCG 137911 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || | || || ||||||||||| || || || ||||| || || || || || ||| Sbjct 137912 GCGAAGATCAGGCGCTGCTGGTCCGG-GGGATGCCTTCCTTATCCTGGATCTTGGCCTTG 137970 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || || | || || | || || || | || | ||||||||||| | || Sbjct 137971 ACGTTGTCGATCGTGTCCGAGCTCTCGACCTCCAAGGTGATCGTCTTGCCGGTGAGGGTC 138030 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| |||||||| Sbjct 138031 TTGACGAAGATTTGCAT 138047 Score = 89.7 bits (98), Expect = 5e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 ||||| ||||| | || || || || ||||| ||||| || |||| || | |||| Sbjct 137609 AGCACCAGATGGAGGGTGGACTCCTTCTGAATATTGTAGTCGGCGAGCGTCCTGCCGTCC 137668 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 ||||||||||| ||||| | || |||| ||||||||| || ||||| || || || || Sbjct 137669 TCAAGCTGCTTCCCGGCGAAGATCAGCCTCTGCTGGTCCGGCGGAATCCCCTCCTTGTCC 137728 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| ||| || | ||||| |||||||| | || | ||| Sbjct 137729 TGGATCTTCGCCTTCACATTATCAATGGTATCCGAACTCTCCACTTCGAGGGTGATCGTC 137788 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || || || | || || || || |||||||| Sbjct 137789 TTTCCCGTAAGGGTCTTCACAAATATTTGCAT 137820 >seq88 Length=981168 Score = 86.0 bits (94), Expect = 6e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 |||||||| | | || || || || | || || || || || |||||||| || ||| Sbjct 85002 CCGCCGCGGAGGCGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 85061 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | |||||| |||| || |||||||| ||||| | ||||| |||||||| || || || Sbjct 85062 AGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGGCGCTGCTGATCCGGCGGG 85121 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396 || || || || || || || || ||| || || | || || | || || Sbjct 85122 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAAGACTCGACC 85181 Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 || | || | |||||||||||| | || || || || || ||||| || Sbjct 85182 TCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCATCTT 85231 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499143175357480