Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq295 113 4e-20 seq210 105 7e-18 seq1025 104 2e-17 seq27 100 3e-16 seq474 95.1 1e-14 seq121 89.7 5e-13 seq88 84.2 2e-11 seq13 84.2 2e-11 >seq295 Length=381392 Score = 113 bits (124), Expect = 4e-20 Identities = 329/500 (66%), Gaps = 10/500 (2%) Strand=Plus/Minus Query 52340 CAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACACCGCCACGCTGGCCGAGCG 52399 ||| ||||| |||||||| | |||||||| | || ||| | | |||||||| Sbjct 144766 CAAGAAGGCCCAGTGGGCCCTTCGGTGGATCGGGTCCG---CCGAATCCTTCGCCGAGCG 144710 Query 52400 CATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCCATCTT 52459 | || || || ||| || ||||| | || || |||||| ||| | | ||||| Sbjct 144709 TCTAGTTGCGTTTGCCGCCGTTGAGGGGATCTTCTTCTCCGGCTCCTTCTGCTCTATCTT 144650 Query 52460 TTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCG 52519 | | || | | ||| | ||||| || || || ||| ||||||| | || || || Sbjct 144649 CTGGCTCAAGAAGCGCGGCCTCATGCCGGGTCTCACCTTCTCCAACGAGCTCATCTCCCG 144590 Query 52520 CGACGAAGGACTGCACACGGACTTTGCGTGCCTCTACTACAAGACGCGCGTGACCGAAAA 52579 |||||| || || ||| ||||| || |||||| |||| | | | | | | || Sbjct 144589 CGACGAGGGCCTCCACTGCGACTTCGCCTGCCTCCTCTACT---CCCTCCTCAACCGCAA 144533 Query 52580 ATTGGATTCGGACACGATCCTGAGCATGTTCAAGGAGGCGGTGGCTATCGAAAAGGAGTT 52639 | | |||| ||| | || || || || || | ||||| | |||||| Sbjct 144532 GCTCTCTGAGGACCGCATCAAGTCGATCATCGCCGACGCCGTTGACATCGAGAGGGAGTT 144473 Query 52640 TTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCCATGTGCGAGTA 52699 || | |||||||||||| | |||| |||| ||||||| | | | ||| || |||| Sbjct 144472 CGTTTGCGACGCGCTGCCGGTGGCGCTGGTGGGGATGAACGGGGATTTGATGAGCCAGTA 144413 Query 52700 CATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGC-CAAAGTACTTCAACG 52758 ||| ||||| ||||||||||| || |||| | ||| ||| || |||| | | | Sbjct 144412 CATTGAGTTCGTGGCGGATCGGCTCTTGGGGGCGCT-GGGATGCGGGAAGTTGTAC-GGG 144355 Query 52759 CTCGC-AATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAACTTTTTC 52817 | || ||||| || || | ||| | || |||||| |||| ||||| || || ||| Sbjct 144354 GTGGCGAATCCATTCGACTGGATGGAGCTGATATCGCTTCAGGGGAAGACGAATTTCTTC 144295 Query 52818 GAGAAGCGAGTCGGCGAGTA 52837 |||||| | ||||| || || Sbjct 144294 GAGAAGAGGGTCGGAGAATA 144275 >seq210 Length=498004 Score = 105 bits (116), Expect = 7e-18 Identities = 297/450 (66%), Gaps = 11/450 (2%) Strand=Plus/Minus Query 52392 GCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCC 52451 || |||||| | |||||||||||| || || || | || || |||||| ||| | Sbjct 322287 GCGGAGCGCCTCGTGGCCTTCGCCGCTGTTGAAGGGATCTTCTTCTCCGGCTCCTTCTGC 322228 Query 52452 GCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTG 52511 ||||||| | | || | | |||| | ||||| ||||| || ||| ||||||| | Sbjct 322227 TCCATCTTCTGGCTCAAGAAGCGAGGCCTCATGCCGGGCCTCACTTTCTCCAACGAGCTC 322168 Query 52512 ATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTCTACTACAAGACGCGCGT- 52570 || || |||||||| || || ||| ||||| || |||||| |||| | | | | Sbjct 322167 ATCTCCCGCGACGAGGGCCTCCACTGCGACTTCGCCTGCCTCCTCTAC---TCCCTCCTC 322111 Query 52571 GACCGAAAAAT--TGGATTCGGACACGATCCTGAGCATGTTCAAGGAGGCGGTGGCTATC 52628 |||| || | || |||| ||| | || || || || || | ||| Sbjct 322110 AACCGCAAGCTCCCCGA---GGACCGCATCAAGTCGATCATCGCCGACGCTGTCGACATC 322054 Query 52629 GAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCC 52688 || | |||||| | | |||| |||| || | ||| |||| ||||| | | | | Sbjct 322053 GAGAGGGAGTTCGTCTGCGACGCGTTGCCCGTGGCGCTTGTGGGGATGAATGGGGATTTG 321994 Query 52689 ATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGC-CAAA 52747 ||| || | ||||||||||| |||||||||||||| |||| | | | ||| || || Sbjct 321993 ATGAGCCAATACATCGAGTTCGTGGCGGATCGTCTCTTGGGGGCG-TTGGGATGCGGGAA 321935 Query 52748 GTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGAC 52807 || | | || |||||||| || | ||| | || ||||| | || ||||| Sbjct 321934 GTTGTACGGGGCAGCGAATCCGTTCGATTGGATGGAGCTGATATCGCTCCAAGGGAAGAC 321875 Query 52808 CAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837 || |||||||||||| | ||||| || || Sbjct 321874 TAATTTTTTCGAGAAGAGGGTCGGGGACTA 321845 >seq1025 Length=71329 Score = 104 bits (114), Expect = 2e-17 Identities = 163/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 |||||| || | || | || | ||| | | | |||||||| || ||||||||||| Sbjct 8505 GCCGCCGCGGAGGCGGAGGACGAGATGGAGGGTGGACTCCTTCTGTATGTTGTAGTCAGC 8446 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | || || ||||||||| || || |||| |||| || ||||| ||||||||||| Sbjct 8445 GAGGGTCCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCCGGAGG 8386 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCA 138565 || || || ||||| ||| || || | ||||| | | |||||||| ||||||| Sbjct 8385 GATGCCCTCCTTGTCCTGGATCTTGGTCTTGACATTGT-CGATGGTGTCGGAAGACTCCA 8327 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATGG 138616 |||| | || | || || || || || || || || || |||||||||| Sbjct 8326 CCTCAAGGGTGATAGTCTTCCCCGTGAGGGTCTTCACGAAGATCTGCATGG 8276 >seq27 Length=1763170 Score = 100 bits (110), Expect = 3e-16 Identities = 142/196 (72%), Gaps = 4/196 (2%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || ||||| || || ||||||||| | || || ||||||||| || || |||| | Sbjct 581090 GATTCCTTCTGGATATTGTAGTCGGCAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCA 581031 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539 |||| |||||||| ||||| || || || || || ||||| ||| | |||| |||| Sbjct 581030 AAGATCAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCT-TGAATCTTTGCCTTAAC 580972 Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 |||| | | ||| |||| ||||||||||| | || | || || || || ||||| | Sbjct 580971 GTTGT-CGATGGTATCGGAGGACTCCACCTCAAGGGTGATGGTCTTGCCGGTGAGAGTCT 580913 Query 138599 TTACAAAAATCTGCAT 138614 | || || |||||||| Sbjct 580912 TGACGAAGATCTGCAT 580897 Score = 82.4 bits (90), Expect = 8e-11 Identities = 138/196 (70%), Gaps = 4/196 (2%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || ||||| ||||||||||| || || || || ||||| || || ||||| | | Sbjct 581545 GATTCCTTCTGAATGTTGTAATCCGCCAGGGTGCGGCCATCCTCCAGCTGCTTACCAGCA 581486 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG--TTTTA 138538 |||| | |||||| ||||| ||||| ||||| || ||||| ||| |||| | || Sbjct 581485 AAGATCAAACGCTGCTGGTCTGGAGGAATACCCTCCTTGTC-CTGAATTTTGGCCTTCAC 581427 Query 138539 ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 |||| || | || || | ||| ||||| | || | || || ||||| || |||| Sbjct 581426 ATTG-TCAATCGTATCCGAGCTCTCGACCTCAAGGGTGATGGTCTTCCCAGTGAGGGTTT 581368 Query 138599 TTACAAAAATCTGCAT 138614 | ||||| |||||||| Sbjct 581367 TGACAAAGATCTGCAT 581352 >seq474 Length=218880 Score = 95.1 bits (104), Expect = 1e-14 Identities = 138/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||| ||| | || || ||||||||| || || |||| Sbjct 25108 GACTCCTTCTGGATGTTGTAATCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCG 25167 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || ||||| ||||| || || || || || ||||| ||| || || | Sbjct 25168 AAGATGAGGCGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACG 25227 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||||| ||||||||||||| || | || || || ||||| || || Sbjct 25228 TTGTCGATGGTGTCGGAGGACTCCACCTCGAGGGTGATAGTCTTCCCCGTCAGGGTCTTC 25287 Query 138601 ACAAAAATCTGCATG 138615 || || ||||||||| Sbjct 25288 ACGAAGATCTGCATG 25302 >seq121 Length=770561 Score = 89.7 bits (98), Expect = 5e-13 Identities = 139/196 (71%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || ||||| ||||||||||| || || || || | || ||||| || || || | | Sbjct 403020 GATTCCTTCTGAATGTTGTAATCTGCCAGCGTGCGTGCATCTTCGAGCTGCTTTCCAGCA 403079 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG-TTTTAA 138539 |||| |||||||| || ||| || || ||||| || || ||| | |||| || | Sbjct 403080 AAGATAAGACGCTGCTGATCCACAGAGATTCCTTCCTTATC-CTGAATCTTTGCCTTGAC 403138 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 | || | |||||||| ||||||||| | || | ||| || || |||| ||| || Sbjct 403139 ATTATCGATGGTGTCGGAGCTCTCCACCTCCAAAGTGATCGTCTTCCCCGTCAAAGTCTT 403198 Query 138600 TACAAAAATCTGCATG 138615 |||||| ||||||||| Sbjct 403199 TACAAAGATCTGCATG 403214 >seq88 Length=981168 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| | || || ||||||||| || || |||| Sbjct 85035 GACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCG 85094 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || ||||| || ||||| || || || || ||||| ||| || || | Sbjct 85095 AAGATGAGGCGCTGCTGATCCGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACG 85154 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||||| | ||||| ||||||| || | || || || || || || || Sbjct 85155 TTGTCGATCGTGTCCGAAGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTG 85214 Query 138601 ACAAAAATCTGCAT 138614 ||||| |||||||| Sbjct 85215 ACAAAGATCTGCAT 85228 >seq13 Length=2550137 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| | || || ||| ||||| ||||| |||| Sbjct 1356626 GACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCTTCGAGCTGTTTTCCGGCG 1356685 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || ||||| |||||||| || || || || ||||| ||| || || | Sbjct 1356686 AAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACG 1356745 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||||| | ||||| ||||||| || | || || || || || || || Sbjct 1356746 TTGTCGATCGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTC 1356805 Query 138601 ACAAAAATCTGCAT 138614 || || |||||||| Sbjct 1356806 ACGAAGATCTGCAT 1356819 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495764171160240