Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= NC_011645.1 Length=37456 Score E Sequences producing significant alignments: (Bits) Value seq7757 170 5e-38 seq31478 107 5e-19 >seq7757 Length=3350 Score = 170 bits (188), Expect = 5e-38 Identities = 382/565 (68%), Gaps = 13/565 (2%) Strand=Plus/Plus Query 14465 GATCCTCTAACTCTATTAAAGAAAACAGCAACTTTATTTAACAAAGAGTTGCAATATCGT 14524 |||||||| || | |||||||||| ||| ||||||| | |||| | ||||| ||| Sbjct 827 GATCCTCTTACCTTTTTAAAGAAAATAGCTTCTTTATTCGATTTAGAGATTCAATACCGT 886 Query 14525 GTAGAGGTTGAGGGATCAACTATCACTGGCTGGTATGTTGATTTAATCGAAAAAGTTGGT 14584 ||||| || | || ||| || ||||||||| || ||| | | ||||| ||| Sbjct 887 GTAGAAGTAGTCGGTTCACAGATTGTTGGCTGGTACGTGGATATGGTGAAAAAACGCGGT 946 Query 14585 CGTGCCACTCGCAAAGAGGTTGAACT--AGGGAAAGACTTAATCAACGTTACACGTATTG 14642 | | || |||| || || |||| |||||| || ||| | |||| |||||||| Sbjct 947 AGAGACATAGGCAAGGAAGT--AACTTTAGGGAAGGATTTAGTTGGTGTTAAACGTATTG 1004 Query 14643 AACACACAAAGAATATCTGTACTGCATTATTAGGTTTCGCGCGCGGTCAAGATA--ACGA 14700 | || | | | || | |||||||| ||| | || |||| | || ||| || | Sbjct 1005 AGCATTCTAGGGATGTTTGTACTGCCTTAGTCGGATTCGTCCAGGGCGAAGGGGGTACCA 1064 Query 14701 GGTGATCACAATTGAGGGCATCAACAACGGTGCTCCTTACATTGTTGATAATGAAGCATT 14760 | || ||| |||| |||| || | ||| ||||| ||| ||||| || || | Sbjct 1065 --TTATTACAGTTGAAAGCATTAATGATGGTTTACCTTATATTACTGATAGCGATGCCTA 1122 Query 14761 TCAGCGCTGGAGTGAGAACGGTCAACATAAATATGGTTTTTATCAACCAGAAACAGAAGG 14820 ||| ||||||| ||||| ||| ||||||||| ||| || || ||||||||||||| Sbjct 1123 TCAACGCTGGAACGAGAATGGTAAACATAAATTTGGCTTCTACACTCCAGAAACAGAAGA 1182 Query 14821 AGAAA--TTGAC-GCAAAACGTCTTATGACTCTTATGAAAACCGAAATGGAGAAAAGAAA 14877 | ||| |||| |||| || || ||||||||||||||||| || | | ||| | Sbjct 1183 ACAAAATATGACACCAAAGCGGCTCATGACTCTTATGAAAACAGAGTTCGCTAAACGCGT 1242 Query 14878 GAATTCTTCAGTCGGATATGAAGTAGACGCGATTGACATTGCTGAAGTGTTTGGCTTACG 14937 ||| |||| || | || || ||||| || | || | || ||||| || Sbjct 1243 TAATACTTCTGTTGTTTACGATGTAGAAGCAGCAGCTATAGGGCGTGTATTTGGACTATC 1302 Query 14938 TCATGAATTGA-TCATGAAGGGTGACACAATCGGCATTAAAGACACGGCGTTTACACCTG 14996 |||||| | | | ||||| || || ||||| | |||||||| || | |||||||| Sbjct 1303 TCATGAGCTAATTAATGAA-GGAGATACAATTCGAATTAAAGATACTGGATTTACACCGA 1361 Query 14997 CATTGTATTTAGAAGCGCGAGCGAT 15021 | | ||||||||||| || || || Sbjct 1362 AACTTTATTTAGAAGCACGGGCAAT 1386 >seq31478 Length=1036 Score = 107 bits (118), Expect = 5e-19 Identities = 180/260 (69%), Gaps = 3/260 (1%) Strand=Plus/Minus Query 19668 GTAGATGATAAAGAAGCGATCCAATTAATTCCATTCAATCGCAATGCCTGGCACGCTGGA 19727 ||||||||||||||||| | ||| ||||| || | || || || ||||| ||| Sbjct 907 GTAGATGATAAAGAAGCTGTACAAGGTATTCCTTTAGAACGTAACGCTTGGCATTGTGGT 848 Query 19728 GACGGAGGAAGCGGACGCGGTAACCGTCATTCTATCGGAGTTGAAATCTGTTATTCTAAA 19787 ||||| || |||| ||||| ||| | ||||||||||||||||| || || ||| | Sbjct 847 GACGGTGG---CGGAAATGGTAATCGTAAATCTATCGGAGTTGAAATTTGCTACTCTTTA 791 Query 19788 TCTGGTGGCCCGCGTTATGAACAAGCTGTACGAAATGCGATCATCGTTATTAGACAGTTA 19847 ||||| || ||| | |||| | | ||||| |||||| | ||| ||| Sbjct 790 AGCGGTGGAGATCGATATTATAAAGCAGAAGATAATGCAGCTATCGTTGTAGCACAATTA 731 Query 19848 ATGGATCAGTTTAACATCCCGATTGATCGTGTTAAAACACACCAAGAACGAAACGGAAAA 19907 ||| | |||| || || || ||| | ||| ||||||||| | | | ||||| Sbjct 730 ATGAAACAGTACAATATTCCAATTAGTAAAGTTCGCACACACCAATCATGGAGTGGAAAG 671 Query 19908 TATTGTCCACATCGTATGCT 19927 |||||||| ||||||||||| Sbjct 670 TATTGTCCTCATCGTATGCT 651 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 119623398542772