Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq464 95.1 1e-14 seq88 95.1 1e-14 seq27 95.1 1e-14 seq13 93.3 4e-14 seq121 86.0 6e-12 >seq464 Length=225985 Score = 95.1 bits (104), Expect = 1e-14 Identities = 162/231 (70%), Gaps = 3/231 (1%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || ||||| || || | | || || || || || || ||||||||||| ||||||||| Sbjct 137819 ATCCCTCCACGAAGGCGGAGAACCAGGTGGAGAGTGGACTCCTTTTGGATGTTATAATCG 137878 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || ||| || || | ||| || || ||| | |||| || ||||||||||| Sbjct 137879 GCGAGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGG- 137937 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 || |||||||| ||||| || || || |||| || | || | ||||| || ||| Sbjct 137938 GGGATGCCTTCCTTATCCTGGATCTTGGCCTTGA-CGTTGTCGATCGTGTCCGAGCTCTC 137996 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||| || | || | ||| |||||||| || || || || || |||||||| Sbjct 137997 GACCTCCAAGGTGATCGTCTTGCCGGTGAGGGTCTTGACGAAGATTTGCAT 138047 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || |||||||| | | ||| ||||| || || || ||||| || ||||| || ||| Sbjct 137591 ATCCCACCGCGGAGGCGGAGCACCAGATGGAGGGTGGACTCCTTCTGAATATTGTAGTCG 137650 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || || | || || | || || || ||| | |||| | |||||||||||| Sbjct 137651 GCGAGCGTCCTGCCGTCCTCAAGCTGCTTCCCGGCGAAGATCAGCCTCTGCTGGTCCGGC 137710 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 ||||| || || || || || || || || | || | ||| || ||| ||| Sbjct 137711 GGAATCCCCTCCTTGTCCTGGATCTTCGCCTTCACATTATCAATGGTATCCGAACTCTCC 137770 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 |||||||| || | ||| || || || || || || ||||| ||||||||| Sbjct 137771 ACTTCGAGGGTGATCGTCTTTCCCGTAAGGGTCTTCACAAATATTTGCATC 137821 >seq88 Length=981168 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 || |||||||| | | || || || || || || ||||| ||||| || || ||| | Sbjct 85002 CCGCCGCGGAGGCGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 85061 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | ||| || || | || ||||| ||| | || | || ||||| |||||||| Sbjct 85062 AGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGGCGCTGCTGATCCGGCGGG 85121 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGAC 45292 ||||| || || || || || || |||| || | || | ||||| ||||||||||| Sbjct 85122 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCGATCGTGTCCGAAGACTCGAC 85180 Query 45293 TTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 ||||| || | || |||||||| || || || ||||| || |||||| Sbjct 85181 CTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCATC 85229 >seq27 Length=1763170 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAAT-C 45169 || || || ||||| | | || ||||| ||||| |||||||||||||| || || | | Sbjct 581353 ATCCCACCACGGAGGCGGAGGACGAGATGGAGCGTAGATTCCTTTTGGATGTTGTAGTCC 581294 Query 45170 GCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGG 45229 ||| | ||| ||| || | ||| || || ||| | |||| | |||||||| || Sbjct 581293 GCT-AAGGTGCGGCCATCCTCGAGTTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCTGG 581235 Query 45230 CGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTC 45289 ||||| || || ||||| || || || |||| || | ||||||||| ||| Sbjct 581234 GGGAATTCCCTCCTTATCCTGGATCTTAGCCTTGACATTGTCGATGGTGTCGGAGCTCTC 581175 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||| || || |||| || |||||||| || || || || || || ||||| Sbjct 581174 GACCTCCAGGGTAATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 581124 >seq13 Length=2550137 Score = 93.3 bits (102), Expect = 4e-14 Identities = 160/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 45113 TCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCT 45172 ||| |||||||| | | || ||||| || || || ||||| ||||| || || ||| Sbjct 1356592 TCCACCGCGGAGGCGGAGGACGAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGC 1356651 Query 45173 GACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGG 45232 || ||| || || | |||||||| ||| | || | || ||||||||||| || Sbjct 1356652 GAGGGTGCGGCCGTCTTCGAGCTGTTTTCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGG 1356711 Query 45233 AATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGA 45291 ||||| || || || || || || |||| || | || | ||||| || ||||||| Sbjct 1356712 GATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCGATCGTGTCCGAGGACTCGA 1356770 Query 45292 CTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 | ||||| || | || ||||| || || || || || || || |||||| Sbjct 1356771 CCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCATC 1356820 >seq121 Length=770561 Score = 86.0 bits (94), Expect = 6e-12 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191 || || |||||||| || ||||||||||| || || || | ||| ||||||| Sbjct 403461 ACCAGGTGCAGCGTGGACTCCTTTTGGATGTTGTAGTCTGCCAGGGTGCGGCCATCGTCC 403520 Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251 | || || || || | |||| || ||||| || || || || || |||||||| ||| Sbjct 403521 AGCTGCTTCCCAGCAAAGATCAGGCGCTGCTGATCAGGTGGGATCCCCTCTTTATCCTGA 403580 Query 45252 ATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTT 45310 || || ||| | || | || | |||||| || ||| || || || || | || || Sbjct 403581 ATCTTAGCTTTCA-CGTTATCAATGGTGTCTGAGCTCTCAACCTCAAGGGTGATTGTCTT 403639 Query 45311 GCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 |||||| || || || ||||| || |||||| Sbjct 403640 GCCGGTGAGGGTCTTCACAAAGATCTGCATC 403670 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451549405737320