Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq295 145 9e-30 seq210 122 1e-22 >seq295 Length=381392 Score = 145 bits (160), Expect = 9e-30 Identities = 122/150 (81%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 127531 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 127590 |||||| |||||||| ||||||||||| || || |||||| ||||| |||||||| || Sbjct 144574 GTGGAGGCCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTGAGACCCGGCATGAGGCC 144633 Query 127591 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 127650 |||||||| | |||||| || | || || ||||| ||||||||||||||||| || Sbjct 144634 GCGCTTCTTGAGCCAGAAGATAGAGCAGAAGGAGCCGGAGAAGAAGATCCCCTCAACGGC 144693 Query 127651 CGCGAACGCAAATAGACGCTCGGCAAAGGA 127680 || ||||||| |||||||||||| ||||| Sbjct 144694 GGCAAACGCAACTAGACGCTCGGCGAAGGA 144723 >seq210 Length=498004 Score = 122 bits (134), Expect = 1e-22 Identities = 341/507 (67%), Gaps = 25/507 (5%) Strand=Plus/Plus Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATT--CTCC 127288 |||||||||||||| ||||||||| || || |||||||| | ||| ||||| |||| Sbjct 321844 GTAGTCCCCGACCCTCTTCTCGAAAAAATTAGTCTTCCCTTGGAGC--GATATCAGCTCC 321901 Query 127289 ATAAAATCAAATGGGTTCTTTGAGT--TCCAAATTGTTGGCACCCCAATCTGTTTGAGGA 127346 || |||| || || ||| || | ||| || | || ||||| | | || Sbjct 321902 ATCCAATCGAACGGATTCGCTGCCCCGTACAACTTCCCG-CATCCCAA-CGCCCCCAAGA 321959 Query 127347 GACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGT 127406 ||||||||| ||| |||| ||||| | |||| || ||||| || | || Sbjct 321960 GACGATCCGCCACGAACTCGATGTATTGGCTCATCAAATCCCCATTCATCCCCACAAGCG 322019 Query 127407 TACATGGG-AGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATG 127465 || ||| | |||||| ||| |||| || |||| ||||| ||||| || | ||| Sbjct 322020 C-CACGGGCAACGCGTCGCAGACGAACTCCCTCTCGATGTCGACAGCGTCGGCGATGATC 322078 Query 127466 GCGTGAATAGTGTCCACCCC-AGGT--CTATTGCGTAAAGTCTTGAAGAGTTCCACAGCA 127522 | | || |||| | || | | ||| | | | | || ||| || || Sbjct 322079 GACTTGATGCGGTCCTCGGGGAGCTTGCGGTTGAGGAGGGAGTAGAGGAGG--CAG-GCG 322135 Query 127523 AACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGC 127582 || || |||||| |||||||| ||||||||||| || || ||||| || || ||| Sbjct 322136 AAGTCGCAGTGGAGGCCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAAGTGAGGCCCGGC 322195 Query 127583 ATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCC 127642 ||||| || |||||||| | |||||| || | || || ||||| |||||||||||||| Sbjct 322196 ATGAGGCCTCGCTTCTTGAGCCAGAAGATGGAGCAGAAGGAGCCGGAGAAGAAGATCCCT 322255 Query 127643 TCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAG--CG-GGACTTTGTATCAAAC 127699 || ||| ||||| || | || ||||| || || ||| || |||| || || | Sbjct 322256 TCAACAGCGGCGAAGGCCACGAGGCGCTCCGCGAAAGAGTCCGAGGAC--TGGAT----C 322309 Query 127700 CACTTCATCGCCCACTGTGCCTTTTTC 127726 ||| | ||||||||| ||||| ||| Sbjct 322310 CACCGGAGCGCCCACTGGGCCTTCTTC 322336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 612891261777720