Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq295 154 2e-32 seq210 127 3e-24 >seq295 Length=381392 Score = 154 bits (170), Expect = 2e-32 Identities = 426/644 (66%), Gaps = 22/644 (3%) Strand=Plus/Plus Query 159628 CTTCTTGTATTG--CGACACATTCTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATT 159685 ||||| ||||| |||| | |||||||||| || || ||||| |||| | ||||| Sbjct 144268 CTTCTGGTATTCTCCGACCC--TCTTCTCGAAGAAATTCGTCTTCCCCTGAAGCGATATC 144325 Query 159686 GATTCCATGAACCCGAATGGGTTCTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCC 159745 ||||| | ||||||| ||| ||| || |||| |||| || ||| || Sbjct 144326 AGCTCCATCCAGTCGAATGGATTCGCCACCCCGTACAACTTCCCGCATCCCAGCGCCCCC 144385 Query 159746 AGCAACCTGTCTGCCACAAATTCGATGTAGCTACACATCTGCTCACAGTTGATCCCCAGC 159805 | | || || ||||| || || ||||| | |||| || | ||| ||||||| | Sbjct 144386 AAGAGCCGATCCGCCACGAACTCAATGTACTGGCTCATCAAATCCCCGTTCATCCCCACC 144445 Query 159806 AGCCTAACGGGGAGCGCTTCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACA 159865 ||| || || ||||| || | | |||||| |||| || || || || |||| | Sbjct 144446 AGCGCCACCGGCAGCGCGTCGCAAACGAACTCCCTCTCGATGTCAACGGCGTCGGCGATG 144505 Query 159866 ATCTGCGAGACACGTTCGTACCCCGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGCAC 159925 ||| | || || || | |||||| | | || | | |||||||| Sbjct 144506 ATCGACTTGATGCGGTCCTCAGAGAGCTTGCGGTTGAGGAGGGAGT---AGAGGAGGCAG 144562 Query 159926 GCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCC 159985 || ||||||||||| || |||||||| || ||||||| ||||||||| | | |||| ||| Sbjct 144563 GCGAAGTCGCAGTGGAGGCCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTGAGACCC 144622 Query 159986 GGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCA-CCGCTAAAAAAGAT 160044 ||||||| || ||| |||||||| || || | ||| ||| | ||| || ||||| Sbjct 144623 GGCATGAGGCCGCGCTTCTTGAGCCAGAAGATAG-AGCAGAAGGAGCCGGAGAAGAAGAT 144681 Query 160045 CCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGT 160104 |||||| ||||| |||||||| || || | ||| | || || || || | | | Sbjct 144682 CCCCTCAACGGCGGCAAACGCAACTAGACGCTCGGCGAAGGATTCGGCGGACCC---GAT 144738 Query 160105 CCACCTTTTGGCCCATTCAGCCTTCTTTG-CGATGCACGGCATGCGCTCGACGGCGTTAA 160163 ||||| |||||| | |||||||| | | ||| ||| | | |||||||||| | Sbjct 144739 CCACCGAAGGGCCCACTGGGCCTTCTTGGTCACTGC-CGGGACGGTCTCGACGGCGCGGA 144797 Query 160164 ACAATCTGTCCTGCTCCTTCACATCCTTGATCAGAGTAGCAATC----AGCTTCGAGTAC 160219 | | | || | || | ||||||||| |||| | || || |||||| Sbjct 144798 AAAGGCGATCTTTTTCGTCTGGATCCTTGAT----GTAGGATTCGAGGAGGAGGGAGTAC 144853 Query 160220 ATTTCTGCGTGCACATTTTCGATGGCCATCTGAAAGTTGTAGAA 160263 || || | ||| | || ||||| || ||||| ||| |||||| Sbjct 144854 ATCTCGGAGTGGATGTTCTCGATCGCGATCTGGAAGCCGTAGAA 144897 >seq210 Length=498004 Score = 127 bits (140), Expect = 3e-24 Identities = 133/172 (77%), Gaps = 2/172 (1%) Strand=Plus/Plus Query 159917 AGGAGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATG 159976 |||||||| || ||||||||||| || |||||||| || ||||||| ||||||||| | Sbjct 322124 AGGAGGCAGGCGAAGTCGCAGTGGAGGCCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAA 322183 Query 159977 ATGAGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCA-CCGCT 160035 ||||||||||||||| || ||| |||||||| || |||| ||| ||| | ||| Sbjct 322184 GTGAGGCCCGGCATGAGGCCTCGCTTCTTGAGCCAGAAGATGG-AGCAGAAGGAGCCGGA 322242 Query 160036 AAAAAAGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAG 160087 || |||||||| || || || || || |||||||| | ||| | |||||| Sbjct 322243 GAAGAAGATCCCTTCAACAGCGGCGAAGGCCACGAGGCGCTCCGCGAAAGAG 322294 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794356893997520