Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq474 141 1e-28 seq88 141 1e-28 seq13 138 1e-27 seq464 123 3e-23 seq27 123 3e-23 seq1025 122 1e-22 seq241 116 4e-21 seq121 100 3e-16 seq129 96.9 4e-15 >seq474 Length=218880 Score = 141 bits (156), Expect = 1e-28 Identities = 151/197 (77%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||| |||| || ||||| |||| ||||||||||| |||||||| Sbjct 25110 CTCCTTCTGGATGTTGTAATCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAA 25169 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | |||||||||||| | ||| | || |||||||||| |||||| ||||| ||| Sbjct 25170 GATGAGGCGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGT 25228 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | |||||| || ||||| || | ||||| || || |||||||| || || | Sbjct 25229 TGTCGATGGTGTCGGAGGACTCCACCTCGAGGGTGATAGTCTTCCCCGTCAGGGTCTTCA 25288 Query 46581 CAAAGATTTGCATTTTG 46597 | ||||| ||||| ||| Sbjct 25289 CGAAGATCTGCATGTTG 25305 >seq88 Length=981168 Score = 141 bits (156), Expect = 1e-28 Identities = 151/197 (77%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||||| || ||||| |||| ||||||||||| |||||||| Sbjct 85037 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAA 85096 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||| || | ||| | || |||||||||| |||||| ||||| ||| Sbjct 85097 GATGAGGCGCTGCTGATCCGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGT 85155 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | |||||| || || || || | |||||||| ||||| || || || || | Sbjct 85156 TGTCGATCGTGTCCGAAGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGA 85215 Query 46581 CAAAGATTTGCATTTTG 46597 ||||||| ||||| ||| Sbjct 85216 CAAAGATCTGCATCTTG 85232 >seq13 Length=2550137 Score = 138 bits (152), Expect = 1e-27 Identities = 151/198 (76%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||||| || ||||| |||| |||||||| || |||||||| Sbjct 1356628 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCTTCGAGCTGTTTTCCGGCGAA 1356687 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | |||||||||||| | || | || |||||||||| |||||| ||||| ||| Sbjct 1356688 GATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGT 1356746 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | |||||| || || || || | |||||||| |||||||| || || || | Sbjct 1356747 TGTCGATCGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTCA 1356806 Query 46581 CAAAGATTTGCATTTTGC 46598 | ||||| ||||| |||| Sbjct 1356807 CGAAGATCTGCATCTTGC 1356824 >seq464 Length=225985 Score = 123 bits (136), Expect = 3e-23 Identities = 148/196 (76%), Gaps = 9/196 (5%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||||||||| || || |||| || ||||| |||| ||||| |||||||||||||| Sbjct 137857 CTCCTTTTGGATGTTATAATCGGCGAGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAA 137916 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| |||||||||||| | || | || ||||| ||| |||||| ||||| ||| Sbjct 137917 GATCAGGCGCTGCTGGTCCG-GGGGATGCCTTCCTTATCCTGGATCTTGGCCTTGA-CGT 137974 Query 46522 CG-CCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTT 46577 | | | |||||| |||| || || |||| ||||| || ||||| || || || | Sbjct 137975 TGTCGATCGTGTCCGAGCTC---TCGACCTCCAAGGTGATCGTCTTGCCGGTGAGGGTCT 138031 Query 46578 TAACAAAGATTTGCAT 46593 | || ||||||||||| Sbjct 138032 TGACGAAGATTTGCAT 138047 Score = 105 bits (116), Expect = 8e-18 Identities = 152/213 (71%), Gaps = 6/213 (3%) Strand=Plus/Plus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||||||||| | || |||||| || ||||||||||||| || || | |||| || Sbjct 137611 CACCAGATGGAGGGTGGACTCCTTCTGAATATTGTAGTCGGCGAGCGTCCTGCCGTCCTC 137670 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 |||||||| |||||||| |||| | ||||||||| | ||| | | |||||||||| Sbjct 137671 AAGCTGCTTCCCGGCGAAGATCAGCCTCTGCTGGTCCGGCGGAATCCCCTCCTTGTCCTG 137730 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGA---TTCCACATCCACCGTGATGGT 46560 ||||||| ||| | | | | || || ||| ||||| || | ||||| || Sbjct 137731 GATCTTCGCCTTCACATTATCAATGGTATC---CGAACTCTCCACTTCGAGGGTGATCGT 137787 Query 46561 TTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || ||||| || || || ||||| |||||||| Sbjct 137788 CTTTCCCGTAAGGGTCTTCACAAATATTTGCAT 137820 >seq27 Length=1763170 Score = 123 bits (136), Expect = 3e-23 Identities = 144/192 (75%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| |||||||||||||||| || ||||| |||| ||||||||||||||||| || Sbjct 581087 TCCTTCTGGATATTGTAGTCGGCAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCAAAG 581028 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 |||| ||||||||||| | || | || ||||||||| ||||| | | | | ||| Sbjct 581027 ATCAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCTTGAATCTT-TGCCTTAACGTT 580969 Query 46523 G-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | || ||| || ||||| || | |||||||| ||||| || || || || || Sbjct 580968 GTCGATGGTATCGGAGGACTCCACCTCAAGGGTGATGGTCTTGCCGGTGAGAGTCTTGAC 580909 Query 46582 AAAGATTTGCAT 46593 ||||| ||||| Sbjct 580908 GAAGATCTGCAT 580897 Score = 104 bits (114), Expect = 3e-17 Identities = 151/212 (71%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 || ||||| | ||| ||||||||||| |||||||| | || ||||| | || ||| Sbjct 581332 ACGAGATGGAGCGTAGATTCCTTTTGGATGTTGTAGTCCGCTAAGGTGCGGCCATCCTCG 581273 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 || |||||||||||||| |||| | ||||||||| | || | | |||||| ||| | Sbjct 581272 AGTTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCTGGGGGAATTCCCTCCTTATCCTGG 581213 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTT 46561 ||||| ||||| | | | ||||| |||| || || |||| || ||||| Sbjct 581212 ATCTTAGCCTTGACATTGTCGATGGTGTCGGAGCTC---TCGACCTCCAGGGTAATGGTC 581156 Query 46562 TTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||| || || || || || ||||| ||||| Sbjct 581155 TTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 581124 Score = 84.2 bits (92), Expect = 2e-11 Identities = 147/213 (69%), Gaps = 6/213 (3%) Strand=Plus/Minus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||||||||| | || ||||| || || ||||| || | || ||||| | || || Sbjct 581561 CACCAGATGAAGAGTGGATTCCTTCTGAATGTTGTAATCCGCCAGGGTGCGGCCATCCTC 581502 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 |||||||| || || || ||||| ||||||||||| | || | | |||||||||| Sbjct 581501 CAGCTGCTTACCAGCAAAGATCAAACGCTGCTGGTCTGGAGGAATACCCTCCTTGTCCTG 581442 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGT 46560 || || ||| | | | | ||| || |||| || || || | |||||||| Sbjct 581441 AATTTTGGCCTTCACATTGTCAATCGTATCCGAGCTC---TCGACCTCAAGGGTGATGGT 581385 Query 46561 TTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || || || ||||| |||||||| ||||| Sbjct 581384 CTTCCCAGTGAGGGTTTTGACAAAGATCTGCAT 581352 >seq1025 Length=71329 Score = 122 bits (134), Expect = 1e-22 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| || || |||||||| | || || || |||| ||||||||||| |||||||| Sbjct 8469 CTCCTTCTGTATGTTGTAGTCAGCGAGGGTCCGGCCGTCCTCGAGCTGCTTTCCGGCGAA 8410 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | |||||||||||| | || | || |||||||||| |||||| |||||| | Sbjct 8409 GATGAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTGGTCTTGACATT 8350 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | |||||| || ||||| || | ||||| || || ||||| || || || || Sbjct 8349 GTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTCCCCGTGAGGGTCTTCAC 8290 Query 46582 AAAGATTTGCAT 46593 ||||| ||||| Sbjct 8289 GAAGATCTGCAT 8278 >seq241 Length=450715 Score = 116 bits (128), Expect = 4e-21 Identities = 143/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| |||||||| ||||||| || || || |||| |||||||||||||||||||| Sbjct 239432 CTCCTTCTGGATATTATAGTCGGCGAGCGTCCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 239373 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | || |||||||| | || | || ||||||||| |||||| ||||| ||| Sbjct 239372 GATAAGACGTTGCTGGTCCGGGGGGATGCCCTCCTTGTCTTGGATCTTGGCCTTGA-CGT 239314 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | ||| || || || || |||| || ||||| ||||| || || || || | Sbjct 239313 TGTCGATCGTATCCGAGGACTCGACCTCCAGGGTAATGGTCTTGCCGGTGAGGGTCTTCA 239254 Query 46581 CAAAGATTTGCAT 46593 | ||||| ||||| Sbjct 239253 CGAAGATCTGCAT 239241 >seq121 Length=770561 Score = 100 bits (110), Expect = 3e-16 Identities = 162/232 (70%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| |||||||| || | ||||| || | || |||||| || || ||||| || | Sbjct 403213 TGCCGCCTCTTAATCGGAGGACCAGGTGGAGAGTGGACTCCTTCTGTATGTTGTAATCTG 403272 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 || ||||| | || ||||||||||| || || || |||| |||||||||||| | | Sbjct 403273 CTAATGTGCGGCCATCCTCGAGCTGCTTTCCAGCAAAAATCAGGCGCTGCTGGTCAGGTG 403332 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATT 46541 | || |||||||||| |||||| || | || | | ||||| |||| | Sbjct 403333 CGATGCCCTCCTTGTCCTGGATCTTGGCTTTCACATTCTCAATGGTGTCTGAGCTC---T 403389 Query 46542 CCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | || || | |||||||| || || || || || || || ||||| ||||| Sbjct 403390 CAACCTCAAGAGTGATGGTCTTCCCTGTAAGGGTCTTGACGAAGATCTGCAT 403441 Score = 86.0 bits (94), Expect = 7e-12 Identities = 147/212 (69%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 ||||| |||| || |||||||||||| |||||||| | || ||||| | ||||| Sbjct 403461 ACCAGGTGCAGCGTGGACTCCTTTTGGATGTTGTAGTCTGCCAGGGTGCGGCCATCGTCC 403520 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 |||||||| || || || |||| ||||||||| || | || | | ||| || ||| Sbjct 403521 AGCTGCTTCCCAGCAAAGATCAGGCGCTGCTGATCAGGTGGGATCCCCTCTTTATCCTGA 403580 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTT 46561 ||||| || | | | | ||||| |||| || || || | ||||| || Sbjct 403581 ATCTTAGCTTTCACGTTATCAATGGTGTCTGAGCTC---TCAACCTCAAGGGTGATTGTC 403637 Query 46562 TTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||| || || || || |||||||| ||||| Sbjct 403638 TTGCCGGTGAGGGTCTTCACAAAGATCTGCAT 403669 >seq129 Length=753513 Score = 96.9 bits (106), Expect = 4e-15 Identities = 139/195 (71%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 ||| || |||||||||||||| | || |||||| | || || || || |||||||| || Sbjct 556718 CTCTTTCTGGATATTGTAGTCAGCTAAAGTGCGACCATCCTCAAGTTGTTTGCCGGCAAA 556777 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||| | | ||||||||| | || | || |||||| ||| ||| || ||| | | Sbjct 556778 TATGAGCCTCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGGATTTTGGCCTTAACATT 556837 Query 46522 CGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTT 46578 | | ||||| |||| || || || | |||||||| ||||| || || || || Sbjct 556838 ATCAATTGTGTCCGAGCTC---TCAACTTCAAGGGTGATGGTCTTGCCTGTGAGAGTCTT 556894 Query 46579 AACAAAGATTTGCAT 46593 ||||||||| ||||| Sbjct 556895 AACAAAGATCTGCAT 556909 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 564670921842840