Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq121 102 6e-17 >seq121 Length=770561 Score = 102 bits (112), Expect = 6e-17 Identities = 168/238 (71%), Gaps = 6/238 (3%) Strand=Plus/Plus Query 39486 ATCATCGCCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATA 39545 |||| | || || || | ||| || || | || | ||| |||||| || || || || Sbjct 402752 ATCACCACCACCACGGAGACGAAGGACAAGGTGAAGGGTGGATTCTTTCTGAATGTTGTA 402811 Query 39546 ATCGGCCAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATC 39605 ||| || | | || |||| |||| || ||||| ||||||| | ||||||||||| Sbjct 402812 ATCTGCAAGAGTGCAACCATCCTCCAGCTGCTTCCCAGCAAAAATGAGGCGCTGCTGATC 402871 Query 39606 CGAGGGTACGCCTTCTTTGTCGCATATTTTTTG--TTTA-ATCGTCGCTACTGTGTCTGC 39662 || || || ||| || ||||| | | | |||| || | || ||| || ||||| | Sbjct 402872 CGGGGATATGCCCTCCTTGTC-CTGAATCTTTGCCTTCACATTATCGATA--GTGTCAGA 402928 Query 39663 GCTTTCCACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCATG 39720 || ||||| ||||||||||| || || || || | ||| || || |||||||||||| Sbjct 402929 ACTCTCCACCTCCAAAGTAATGGTCTTCCCTGTAAGAGTCTTCACAAAGATCTGCATG 402986 Score = 91.5 bits (100), Expect = 1e-13 Identities = 164/235 (70%), Gaps = 6/235 (3%) Strand=Plus/Plus Query 39492 GCCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGC 39551 ||| || | || ||||| |||| || | ||| ||| || || || || ||||| || Sbjct 402986 GCCACCCCTCAGCCGCAGCACCAGGTGAAGGGTGGATTCCTTCTGAATGTTGTAATCTGC 403045 Query 39552 CAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGG 39611 || |||| |||| || | || || || |||| || | ||||||||||||| | Sbjct 403046 CAGCGTGCGTGCATCTTCGAGCTGCTTTCCAGCAAAGATAAGACGCTGCTGATCCACAGA 403105 Query 39612 TACGCCTTCTTTGTCGCATATTTTTTG--TTTA-ATCGTCGCTACTGTGTCTGCGCTTTC 39668 | ||||| || || | | | |||| || | || ||| | ||||| | ||| || Sbjct 403106 GATTCCTTCCTTATC-CTGAATCTTTGCCTTGACATTATCGATG--GTGTCGGAGCTCTC 403162 Query 39669 CACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCATGTCG 39723 ||| |||||||| || || || ||||| ||||| ||||| |||||||||||| || Sbjct 403163 CACCTCCAAAGTGATCGTCTTCCCCGTCAAAGTCTTTACAAAGATCTGCATGCCG 403217 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347029572599261