Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq27 187 1e-41 seq591 149 2e-30 seq10 147 9e-30 seq127 129 2e-24 seq74 120 1e-21 seq495 116 1e-20 seq175 116 1e-20 seq79 104 9e-17 seq510 96.9 1e-14 seq129 89.7 2e-12 seq231 84.2 9e-11 >seq27 Length=1763170 Score = 187 bits (206), Expect = 1e-41 Identities = 267/375 (71%), Gaps = 11/375 (3%) Strand=Plus/Plus Query 451238 TTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAA 451297 ||||| | ||||||||||| ||||||||| | | || ||||| ||||| ||||| Sbjct 271491 TTTGCAGCAGAAGAAATTTCTTCTATGGTTTTGATCAAGATGAAGGAAACTGCAGAGGCC 271550 Query 451298 TATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCA 451357 || | ||||| | |||| |||| || |||||||||| ||||| ||||||||| | Sbjct 271551 TACCTGGGTTCCACTGTTAAGAATGCTGTTGTTACTGTTCCTGCTTACTTCAATGATTCT 271610 Query 451358 CAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATT 451417 || || || || || || ||||| || |||| ||||| | ||||| | |||| || Sbjct 271611 CAGCGCCAGGCTACCAAGGATGCTGGTGTTATTTCTGGTCTCAATGTCATGAGAATCATC 271670 Query 451418 AATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAA-----GAA--AC 451470 ||||| || ||||||||||| | || ||||| || | || | || ||| Sbjct 271671 AATGAGCCCACAGCAGCTGCCATTGCTTATGGCCTTG----ATAAGAAGGCTGGAAGTGT 271726 Query 451471 AGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACT 451530 | || || |||||| | | ||||| ||||||| || ||| |||| ||| | || Sbjct 271727 TGGCGAGAAGAATATTCTCATCTTTGACCTTGGTGGCGGCACTTTTGATGTCTCTCTGCT 271786 Query 451531 TTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGG 451590 | | |||||||| || ||||||| || ||||| || |||||| |||||||| ||||| Sbjct 271787 TACTATTGAAGAGGGTATATTTGAGGTGAAGGCTACTGCTGGTGACACTCATCTTGGAGG 271846 Query 451591 TGAAGATATTGATAA 451605 ||| ||| ||||||| Sbjct 271847 TGAGGATTTTGATAA 271861 >seq591 Length=170979 Score = 149 bits (164), Expect = 2e-30 Identities = 257/371 (69%), Gaps = 3/371 (1%) Strand=Plus/Plus Query 451238 TTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAA 451297 ||||| | ||||||||||| ||||||||| | | || ||||| |||| || || Sbjct 162507 TTTGCAGCAGAAGAAATTTCTTCTATGGTTTTGATGAAGATGAAGGAAATTGCTGAGGCC 162566 Query 451298 TATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCA 451357 || | ||||| | |||| ||| || |||||||||| ||||| ||||| ||| | Sbjct 162567 TACTTGGGTTCCACTGTTAAGAATGGTGTTGTTACTGTTCCTGCTTACTTCAACGATTCT 162626 Query 451358 CAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATT 451417 || || || || || || |||||||| |||| ||||| | ||||| | |||| || Sbjct 162627 CAGCGCCAGGCCACCAAGGATGCAGGTGTTATTTCTGGTCTCAATGTCATGAGAATCATC 162686 Query 451418 AATGAACCTACAGCAGCTGCTCTAGCATATGGACTAG-GAAAATCAAAAGAA--ACAGAA 451474 || ||||| ||||||||||| | || || || |||| || | ||| | Sbjct 162687 AACGAACCCACAGCAGCTGCCATTGCTTACGGTCTAGACAAGAAGGCTGGAAGTGTTGGT 162746 Query 451475 GaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCA 451534 || || ||| || | | ||||| ||||||| || ||| |||| ||| | || | Sbjct 162747 GAGAAGAATGTTCTCATCTTTGACCTTGGTGGTGGCACTTTTGATGTCTCTCTGCTCACC 162806 Query 451535 ATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAA 451594 |||||||| || | ||||| || ||||| || |||||| |||||||| || || || Sbjct 162807 ATTGAAGAGGGTATTTTTGAGGTGAAGGCTACTGCTGGTGACACTCATCTTGGGGGAGAG 162866 Query 451595 GATATTGATAA 451605 ||| ||||||| Sbjct 162867 GATTTTGATAA 162877 >seq10 Length=2616268 Score = 147 bits (162), Expect = 9e-30 Identities = 255/369 (69%), Gaps = 5/369 (1%) Strand=Plus/Minus Query 451238 TTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAA 451297 |||||| | |||||||| || |||||||| | | |||||| |||| ||||| Sbjct 1806142 TTTGCTGCAGAAGAAATATCCTCTATGGTGTTGATAAAAATGCGCGAAATTGCAGAGGCT 1806083 Query 451298 TATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCA 451357 || |||||||| |||||| |||| || ||||||| || ||||| |||||||| || Sbjct 1806082 TACCTTGGTTCTACAGTTAAGAATGCTGTTGTTACTGTCCCTGCTTACTTCAATGACTCA 1806023 Query 451358 CAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATT 451417 ||||||||||| || || ||||| || ||||| || | | ||| | || || || Sbjct 1806022 CAACGGCAAGCTACAAAGGATGCTGGTGTCATTGCAGGCCTCAGTGTCATGCGTATCGTT 1805963 Query 451418 AATGAACCTACAGCAGCTGCTCTAGCATATGGACT----AGGAAAATCAAAAGAAACAGA 451473 ||||| |||||||| ||||| | || ||||| || ||||| || | | Sbjct 1805962 AATGAGCCTACAGCTGCTGCCATTGCCTATGGTCTTGACAGGAAGGCTGGCAG-TGCTGG 1805904 Query 451474 AGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTC 451533 || || |||||| | | ||||| ||||||| || ||| |||| || | || | Sbjct 1805903 GGAGAAGAATATTCTCATTTTTGACCTTGGTGGTGGCACTTTTGATGTCTCCCTCCTCAC 1805844 Query 451534 AATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGA 451593 || ||||| || | ||||| || ||||| || |||||| || ||| | || ||||| Sbjct 1805843 CATCGAAGAGGGAATTTTTGAGGTGAAGGCCACTGCTGGTGACACCCATTTGGGTGGTGA 1805784 Query 451594 AGATATTGA 451602 ||| |||| Sbjct 1805783 AGACTTTGA 1805775 Score = 105 bits (116), Expect = 3e-17 Identities = 166/238 (70%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 451896 ATGAAATTGTGCTTGTAGGAGGTTCTACACGAATTCCTAAAATTCAAGATATGTTGTCTT 451955 ||||| |||| ||||| || || || || | || || | | | || | ||| || Sbjct 1805481 ATGAAGTTGTTCTTGTTGGTGGATCGACCAGGATACCCAGAGTCCAGCAAATGCTGCAGG 1805422 Query 451956 CTTATTTTGGAGGAAAACAACTATGTAAGAGCGTAAATCCTGATGAAGCTGTTGCATATG 452015 || ||| || || |||| || ||||| | || |||||||||||||||||||||| Sbjct 1805421 ATTTCTTTAATGGGAAGGAACTCTGCAAGAGTATCAACCCTGATGAAGCTGTTGCATATG 1805362 Query 452016 GTGCTGCAGTTCAAGCAGCTATTCTAACAGGTTCAGATGATGAAAAATTAGGAGATATTC 452075 ||||||| |||||||| || || | | ||| | |||||||| | || ||| Sbjct 1805361 GTGCTGCTGTTCAAGCCGCCATCTTGAGTGGTGAGGGCAATGAAAAAGTGCAGGACCTTC 1805302 Query 452076 TGTTAGTAGATGTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAATGATGAC 452133 |||| | ||||| || ||||| || |||||| | || || ||||| ||| | ||||| Sbjct 1805301 TGTTGCTGGATGTCACTCCTCTTTCCCTTGGATTGGAGACTGCTGGAGGAGTCATGAC 1805244 Score = 91.5 bits (100), Expect = 6e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 451238 TTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAA 451297 ||||| | |||||||| ||||||||||| || | || ||| | | |||||| Sbjct 1814168 TTTGCGGCAGAAGAAATCTCATCTATGGTCCTAATGAAGATGCGCAAGATTGCAGAAGCC 1814227 Query 451298 TATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCA 451357 || | || ||| | || | |||| || | |||| || || || |||||||| | Sbjct 1814228 TACCTGGGATCTACTGTCAAGAATGCTGTTGTCGCTGTACCTGCCTACTTCAATGAGACT 1814287 Query 451358 CAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATT 451417 || | |||||| || ||||| ||| ||||||||| ||||||| | | |||||| Sbjct 1814288 CAGTACCGAGCAACAAAGGATGCTGGAGTTATTGCTGGCCTAAATGTCATGCAGATTATT 1814347 Query 451418 AATGAACCTACAGCAGCTGCTCTAGCATATGGACT 451452 ||||| || | ||| |||||| | || ||||| || Sbjct 1814348 AATGAGCCAATAGCTGCTGCTATTGCTTATGGTCT 1814382 >seq127 Length=761288 Score = 129 bits (142), Expect = 2e-24 Identities = 195/269 (72%), Gaps = 15/269 (6%) Strand=Plus/Plus Query 451332 CTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACAT-ATT 451390 ||||||| ||||| ||||||||||| || |||| |||||||| ||||| || ||| || Sbjct 219065 CTGTTCCAGCTTACTTCAATGATGCTCAGAGGCAGGCAACTAAGGATGCCGG-CATAATA 219123 Query 451391 GCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGA 451450 |||||||| |||||| | | || || || ||||| || || |||||| | || ||||| Sbjct 219124 GCTGGTTTGAATGTTGCTAGGATAATAAACGAACCAACCGCTGCTGCTATTGCCTATGGT 219183 Query 451451 CTAGGAAAATCAAAAGAAA-CAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGG 451509 || | | |||||| | || || || || | || |||||| |||||||||| Sbjct 219184 CT-------TGATAAGAAAGGTGGGGAGAAGAACATCCTTGTTTTTGATCTTGGTGGAGG 219236 Query 451510 AACTCATGATACTTCTGTA-CTT-TCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACC 451567 || |||| || ||| ||| | ||||| | || || ||||| || |||||| Sbjct 219237 GACATTTGAT--GTCAGTATCTTGACTATTGATAACGGAGTTTTTGAGGTTTTGGCAACA 219294 Query 451568 AATGGTGATACTCATCTAGGAGGTGAAGA 451596 |||||||| ||||| || |||||| |||| Sbjct 219295 AATGGTGACACTCACCTGGGAGGT-AAGA 219322 >seq74 Length=1080902 Score = 120 bits (132), Expect = 1e-21 Identities = 138/186 (74%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 451265 GTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCA 451324 ||||| || || ||||| ||||| || ||| || |||| | ||| || | ||| Sbjct 51069 GTTCTAACCAAGATGAAGGAAACTGCTGAATCTTACCTTGGGAAATCTGTTTCTAAAGCA 51128 Query 451325 GTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGA 451384 || ||||||||||| || |||||||||||||| || || || || || |||||||||||| Sbjct 51129 GTGATTACTGTTCCAGCATATTTCAATGATGCTCAGCGACAGGCTACAAAAGATGCAGGA 51188 Query 451385 CATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCA 451444 |||||||| | |||| | |||| ||||||||||| || || || || ||| | Sbjct 51189 AGAATTGCTGGCCTTGATGTACAGAGAATCATTAATGAACCCACCGCTGCAGCACTATCT 51248 Query 451445 TATGGA 451450 |||||| Sbjct 51249 TATGGA 51254 >seq495 Length=210120 Score = 116 bits (128), Expect = 1e-20 Identities = 183/257 (71%), Gaps = 10/257 (4%) Strand=Plus/Plus Query 451340 GCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTA 451399 ||||||||||||||||| | | || ||||| || ||||| || || ||||| || Sbjct 137771 GCTTATTTCAATGATGCTTAGAGACAGGCAACCAAGGATGCTGGCACGATAGCTGGCTTG 137830 Query 451400 AATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAA 451459 |||||| | ||||||| |||||||| ||||| |||||| | |||||||| | ||| Sbjct 137831 AATGTTGCTAGAATTATCAATGAACCAACAGCTGCTGCTATTGCATATGG-TTTGGA--- 137886 Query 451460 TCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGAT 451519 ||| | | | || ||||| || |||| |||||| |||| || || || |||| Sbjct 137887 -CAAGA-AGGGTGGTGAGAAAAACATCCTAGTTTTTGATCTTGGCGGTGGGACATTTGAT 137944 Query 451520 ACTTCTGTACTTT--CAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATA 451577 || | | ||| | ||||| |||| || ||||| || |||||| |||||||| | Sbjct 137945 --GTCAGCATTTTGACTATTGATAATGGAGTTTTTGAGGTTCTGGCAACAAATGGTGACA 138002 Query 451578 CTCATCTAGGAGGTGAA 451594 | ||||| ||| || || Sbjct 138003 CCCATCTGGGACGTAAA 138019 >seq175 Length=600970 Score = 116 bits (128), Expect = 1e-20 Identities = 147/201 (73%), Gaps = 11/201 (5%) Strand=Plus/Minus Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372 || ||| | ||||| |||| ||||| || || || ||||| ||||| || |||||| Sbjct 450862 GTCACTAAAGCAGTGGTTACCGTTCCTGCATACTTTAATGACTCACAAAGGACAGCAACA 450803 Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432 || ||||| || | |||||||||| || | |||||||| || |||||||||||||| || Sbjct 450802 AAGGATGCTGGTCGTATTGCTGGTCTAGAAGTTCTTCGCATCATTAATGAACCTACTGCC 450743 Query 451433 GCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaa-aaaaaTATTTTAGT 451491 || | | ||||||||| | | |||||| |||| || ||| ||| |||| Sbjct 450742 GCATCATTGGCATATGGATT-------TGAAAAGA---AGAACAATGAAACCATTCTAGT 450693 Query 451492 ATTTGATTTTGGTGGAGGAAC 451512 ||||||||| || || || || Sbjct 450692 ATTTGATTTGGGAGGTGGTAC 450672 >seq79 Length=1054456 Score = 104 bits (114), Expect = 9e-17 Identities = 105/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372 ||||| | |||||| | || ||||| || || |||||||| | ||| || ||||| Sbjct 729157 GTTACAAAAGCAGTAGTCACAGTTCCTGCATACTTCAATGACTCTCAAAGGACGGCAACA 729098 Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432 |||||||| || | ||||||||||| |||||||||| ||||| |||||||| ||||| Sbjct 729097 AAAGATGCTGGTCGCATTGCTGGTTTGGATGTTCTTCGTATTATCAATGAACCCACAGCT 729038 Query 451433 GCTGCTCTAGCATATGG 451449 || | | |||||||| Sbjct 729037 GCATCGTTGGCATATGG 729021 >seq510 Length=200581 Score = 96.9 bits (106), Expect = 1e-14 Identities = 133/186 (72%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 451265 GTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCA 451324 ||| | | ||| |||| ||||| || ||| || |||| | ||| || | ||| Sbjct 168370 GTTTTAAATAAGATGAGGGAAACTGCTGAATCTTACCTTGGGAAATCTGTTTCTAAGGCA 168311 Query 451325 GTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGA 451384 || ||||| ||||| || |||||||||||||| || || ||||| || |||||||| ||| Sbjct 168310 GTGATTACAGTTCCTGCATATTTCAATGATGCTCAGCGACAAGCTACAAAAGATGCGGGA 168251 Query 451385 CATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCA 451444 ||| |||| | |||| | |||| ||||||||||| || || || || || | Sbjct 168250 AGAATTTCTGGCCTTGATGTACAGAGAATCATTAATGAACCCACTGCTGCAGCATTATCT 168191 Query 451445 TATGGA 451450 |||||| Sbjct 168190 TATGGA 168185 >seq129 Length=753513 Score = 89.7 bits (98), Expect = 2e-12 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || ||||| || || || || || || || || ||||| ||||| || Sbjct 556909 ATGCAGATCTTTGTTAAGACTCTCACAGGCAAGACCATCACCCTTGAAGTTGAGAGCTCG 556850 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||||| | |||| ||||| || |||||||| || ||||| ||||| || Sbjct 556849 GACACAATTGATAATGTTAAGGCCAAAATCCAGGATAAGGAGGGCATTCCCCCTGACCAG 556790 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | | || || | || ||||||||||| ||||| | ||||| || || || ||| Sbjct 556789 CAGAGGCTCATATTTGCCGGCAAACAACTTGAGGATGGTCGCACTTTAGCTGACTACAAT 556730 Query 391230 ATTGATAAGGATGCAACACTTCAC 391253 || | || || |||| |||||| Sbjct 556729 ATCCAGAAAGAGTCAACTCTTCAC 556706 >seq231 Length=464193 Score = 84.2 bits (92), Expect = 9e-11 Identities = 190/283 (67%), Gaps = 2/283 (1%) Strand=Plus/Minus Query 452198 GATAACCAACCAGGTGTAACTATTCAAGTGTTTGAAGGAGAACGTGCAATGACACGAGAT 452257 || ||||| || ||||| |||||||| | |||||| ||| | || | ||| | || Sbjct 353532 GACAACCAGCCTGGTGTCTTGATTCAAGTTTATGAAGGTGAAAGGGCCAGGACCAGGGAC 353473 Query 452258 AATAATAAACTAGGAGAATTTACTCTTTCAAACATTCCTCCTATGCCAAGGGGAACTCCT 452317 || || || || ||||| || ||| |||||||||| |||||||| |||| Sbjct 353472 AACAACCTCCTTGGTAAATTTGAGCTCTCAGGCATTCCTCCTGCACCAAGGGGCGTTCCT 353413 Query 452318 CAAATTGAAATTACCTATGATGTTGATGCAAATGGTATTCTTAATGTGAGTGCAGTTGAA 452377 |||||| || || || | |||||||||||||| ||||||||| ||| | || Sbjct 353412 CAAATTACGGTTTGCTTCGACATCGATGCAAATGGTATCCTTAATGTGTCTGCTGAGGAC 353353 Query 452378 AAATCATCTGGAAAATCAGAA-AAAATTACAATTACTAATGATAAAAACCGTTTATCTAA 452436 || | | ||| || |||| || || || || || ||||| || | || || Sbjct 353352 AAGACCACCGGACAA-AAGAACAAGATCACCATCACCAATGACAAGGGTAGGTTGAGCAA 353294 Query 452437 AGAAGATATTGAAAAAATGGTAGATGAAGCAGAAAAATTCAAG 452479 || || ||||| || ||||| | || ||||| || | |||| Sbjct 353293 GGAGGAGATTGAGAAGATGGTCCAAGATGCAGAGAAGTACAAG 353251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1973685264136236