Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq295 149 8e-31 seq210 136 5e-27 seq9 116 5e-21 seq39 113 6e-20 >seq295 Length=381392 Score = 149 bits (164), Expect = 8e-31 Identities = 123/150 (82%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 102171 TCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCC 102230 ||||| || ||||| || | || ||||| |||||||| ||||||||||| || ||| Sbjct 144723 TCCTTCGCCGAGCGTCTAGTTGCGTTTGCCGCCGTTGAGGGGATCTTCTTCTCCGGCTCC 144664 Query 102231 TTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAAC 102290 |||||| |||| | |||||||||||||| || |||||||| |||||| |||||||||| Sbjct 144663 TTCTGCTCTATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCGGGTCTCACCTTCTCCAAC 144604 Query 102291 GAGCTTATCTCTCGTGACGAGGGACTCCAC 102320 ||||| ||||| || |||||||| |||||| Sbjct 144603 GAGCTCATCTCCCGCGACGAGGGCCTCCAC 144574 >seq210 Length=498004 Score = 136 bits (150), Expect = 5e-27 Identities = 120/150 (80%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 102171 TCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCC 102230 || || || ||||| ||| | || || || |||||| || ||||||||||| || ||| Sbjct 322293 TCTTTCGCGGAGCGCCTCGTGGCCTTCGCCGCTGTTGAAGGGATCTTCTTCTCCGGCTCC 322234 Query 102231 TTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAAC 102290 |||||| | || | ||||||||||||||||| |||||||| || ||| ||||||||| Sbjct 322233 TTCTGCTCCATCTTCTGGCTCAAGAAGCGAGGCCTCATGCCGGGCCTCACTTTCTCCAAC 322174 Query 102291 GAGCTTATCTCTCGTGACGAGGGACTCCAC 102320 ||||| ||||| || |||||||| |||||| Sbjct 322173 GAGCTCATCTCCCGCGACGAGGGCCTCCAC 322144 >seq9 Length=2675258 Score = 116 bits (128), Expect = 5e-21 Identities = 219/318 (69%), Gaps = 8/318 (3%) Strand=Plus/Plus Query 15975 AAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGC 16034 ||||||||||| || ||||| ||||| || ||||| || |||| ||||||||| | | Sbjct 1603269 AAACCATCCATTTCCGTCAAGAGCTGATTGATAGTCTGCTCCCTCTCATCATTCCCA--C 1603326 Query 16035 ATACCA--CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGC 16092 | | | || |||| ||| ||| | ||||| ||||||||||| || |||||||| |||| Sbjct 1603327 CTCCGAGACCGGCACCGCGCTGCCTCCCCACCGCATCAATCTCGTCGATGAAGACAATGC 1603386 Query 16093 ATGGTTGATTTTCGCGAGCGACT--TCAAAGAGATCCCGTACACGCTTGGCGCCCACACC 16150 | || | ||||| | || || || | |||||| || || || || || || Sbjct 1603387 AGGG--GGCTTTCGACTTGGCCTTCTCGAACAAATCCCGGACCCGAGAAGCTCCAACTCC 1603444 Query 16151 AACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTCACC 16210 || || | |||||| || | | ||||| || || |||||| || | || || Sbjct 1603445 CACGAAGAGCTCCACGAATTCGGAGGCGGCGCAGGAGAAGAAGGGCACCCCGGCCTCGCC 1603504 Query 16211 CGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACC 16270 || | ||| ||||| || |||||||| || || || || ||| | | |||| || Sbjct 1603505 GGCCACGGCCCGGGCAAGGAGAGTCTTTCCGGTGCCGGGAGGACCGACCAAGAGGCAGCC 1603564 Query 16271 TCGTGGAATCTTGGCGCC 16288 | || ||||||||||| Sbjct 1603565 TTTGGGGATCTTGGCGCC 1603582 >seq39 Length=1554931 Score = 113 bits (124), Expect = 6e-20 Identities = 216/310 (70%), Gaps = 14/310 (5%) Strand=Plus/Plus Query 15917 ATCAAGGATATCAACGCGATTCGTTGCGGCGATGACAACAATACCTGT--TTCGTTATCA 15974 ||| ||||| || | ||||| || || || || |||| || || || ||| || || Sbjct 271811 ATCTAGGATGTCTGCACGATTGGTGGCTGCAATTACAATTATTCCAGTATTTCCTT--CA 271868 Query 15975 AAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGC 16034 || |||||||| || ||||| ||||| |||| ||||| || | ||||||||| | | Sbjct 271869 AACCCATCCATTTCAGTCAACAGCTGATTAAGGGTTTGCTCTCTCTCATCATTCCCA--C 271926 Query 16035 ATACCA--CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGC 16092 | | | || | | | |||| |||| || |||||||||||||| | |||| ||||| Sbjct 271927 CTCCAATTCCTGTTCCTCTTTGCCTTCCAACAGCATCAATCTCATCCACAAAGATGATGC 271986 Query 16093 ATGGTTGATTTTCGCGAGCGACTTC--AAAGAGATCCCGTACACGCTTGGCGCCCACACC 16150 | ||| ||| || || |||| ||| ||||| || || || || || ||||| Sbjct 271987 AAGGTGCATTCTCTTTGGC--CTTCTTAAAAAGATCACGGACTCGTGAAGCACCTACACC 272044 Query 16151 AACAAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCAC 16209 |||||||||||| ||||| | | | ||| |||| || || || ||| | ||||| Sbjct 272045 AACAAACATCTCTACAAACTCAGATCCAGAA-ATTGAGAAAAATGGAACACCTGCTTCAC 272103 Query 16210 CCGCAATGGC 16219 | ||||| || Sbjct 272104 CAGCAATTGC 272113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620119197908240