Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq617 91.5 2e-13 seq652 86.0 7e-12 seq210 86.0 7e-12 seq33 82.4 9e-11 >seq617 Length=160175 Score = 91.5 bits (100), Expect = 2e-13 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 109752 GTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGA 109811 |||||| || | ||||||||| || ||||||||||||||||| || || || |||||| Sbjct 56244 GTAGATATTCGACGTGTAGGGCTCAAAACACTCATTGTTGCCAAGAATCTGACTAGTGGA 56185 Query 109812 AGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTC 109846 ||| || ||||| |||||||| ||||| ||||| Sbjct 56184 AGCAGTTGGCATCGGAGCCATAAGAAGGGAGTTTC 56150 >seq652 Length=146776 Score = 86.0 bits (94), Expect = 7e-12 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 109752 GTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGA 109811 |||||| || | |||||||| || ||||||||||||||||| || || || |||||| Sbjct 113286 GTAGATATTCGATGTGTAGGGCTCAAAACACTCATTGTTGCCAAGAATCTGACTAGTGGA 113227 Query 109812 AGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTC 109846 ||| |||||||| ||||| || ||||| ||||| Sbjct 113226 AGCAGTGGGCATAGGAGCTATAAGAAGGGAGTTTC 113192 >seq210 Length=498004 Score = 86.0 bits (94), Expect = 7e-12 Identities = 135/190 (71%), Gaps = 4/190 (2%) Strand=Plus/Plus Query 119508 TGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCT 119567 || || || || || || ||||||||||| || ||| || || |||||||| ||| Sbjct 322145 TGGAGGCCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAAGTGAGGCCCGGCATGAGGCCT 322204 Query 119568 CTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAG 119627 | ||||| ||||| ||||||| || || || || |||||||| || || ||| | Sbjct 322205 CGCTTCTTGAGCCAGAAGATGGAGCAGAAGGAGCCGGAGAAGAAGATCCCTTCAACAGCG 322264 Query 119628 GCGAAAGCGAATAGACGCTCAGCAAAAG-GT-CGAGACTTGTCGAACCACTTGAGAGCCC 119685 ||||| || | || ||||| || |||| || |||| || || |||| ||| |||| Sbjct 322265 GCGAAGGCCACGAGGCGCTCCGCGAAAGAGTCCGAGGACTG--GATCCACCGGAGCGCCC 322322 Query 119686 AGTTGGCCTT 119695 | | |||||| Sbjct 322323 ACTGGGCCTT 322332 >seq33 Length=1606457 Score = 82.4 bits (90), Expect = 9e-11 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 109752 GTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGA 109811 ||||||||| | ||||| || || ||||||||||||||||| || ||||| ||| || Sbjct 1144744 GTAGATGTTGGATGTGTATGGCTCAAAACACTCATTGTTGCCAAGAATTTGGCTAGTTGA 1144803 Query 109812 AGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTC 109846 ||| |||||||| ||||| | ||||| ||||| Sbjct 1144804 AGCAGTGGGCATAGGAGCAACAAGAAGGGAGTTTC 1144838 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588384690182600