Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= NC_017976.1 Length=41164 Score E Sequences producing significant alignments: (Bits) Value seq20449 127 5e-25 >seq20449 Length=1421 Score = 127 bits (140), Expect = 5e-25 Identities = 283/420 (67%), Gaps = 16/420 (4%) Strand=Plus/Plus Query 31724 TTCTTTGGTAATGACACGCTTCATGACATATTCGCTCAAGCCCCAAAGAAAGAAGTGGAT 31783 ||||||||||| || || | ||| || || | || | || || ||||| |||||| Sbjct 483 TTCTTTGGTAACGATACCTTATTTGATATCTTTTCGCAGGATCCGAAAAAAGAGGTGGAT 542 Query 31784 TTCTCAAAATGGATGGGAGAAGGGAAGGTTATTATCATCCGTATGCCGAAAAGAAAACTA 31843 || | ||||||||| || ||||| ||| |||| || || || || || | || || Sbjct 543 TTTGCTAAATGGATGCAGGAGGGGAAAGTTGTTATTATTCGCATACCAAACCGCAAGTTA 602 Query 31844 GGCTCATCTGC---TAAAGTGTTAGCCCACTGGATTACATTAAAGGTTCTCATGACTCGT 31900 || || || |||| | | |||||||||||||||||| | ||||| || Sbjct 603 GGTGAATTAGCATCTAAAACACTTGTCCACTGGATTACATTAAAAACATTTATGACACGA 662 Query 31901 ATGCTTATGAGTGAAGAAGATAAAGAGCGTAGCGGGTGTTTCATGATATTCAACGAACCT 31960 ||||| |||||| | ||||| || ||| || ||||| ||| |||| || || || Sbjct 663 ATGCTCATGAGTAAGGAAGAACAAA---GTAATGGCTGTTTTATGGTATTTAATGAGCCG 719 Query 31961 GAACAAG----TAGAGAGTAAAGGCATGAGTGAACTGATGGGCAGAATCGCAACTGAAGG 32016 || ||| || |||| || | | | |||| ||||| | || | || ||||| Sbjct 720 GAGCAATACGCTACAGAG----GGATTAACTAAACTCATGGGTCGTATTGGTACAGAAGG 775 Query 32017 CAGGAAAGAAAGACTCGGATCAATCTTTGCTTTCCATCATTGGAATAAGCTGCCCGACCA 32076 | || ||| || |||| | | | ||| |||||||||||||||||| | || || Sbjct 776 TCGCAAGGAACGATTCGGGGCGTTATATGCGTTCCATCATTGGAATAAGTTACCGCACTC 835 Query 32077 TTTGCAGGATAATCT-CATCGCGGGCGGCGTGAATCAATTCTTATTCGCAAATGACCACA 32135 ||| ||||| ||| | || || || || || | ||| ||||||| |||| || |||| Sbjct 836 TTTACAGGAAAATTTACAAGGC-GGTGGAGTACAACAAATCTTATTTTCAAACGATCACA 894 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 131477681556204