Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= NC_018085.1 Length=41992 Score E Sequences producing significant alignments: (Bits) Value seq7757 913 0.0 seq24083 329 9e-86 seq49971 165 2e-36 seq10747 114 3e-21 >seq7757 Length=3350 Score = 913 bits (1012), Expect = 0.0 Identities = 1310/1839 (71%), Gaps = 25/1839 (1%) Strand=Plus/Plus Query 13244 ACAGAGAAAGATGATTCAGAACGTTTTGCGCGGTGGACAGATGAAAATAACTACCATATG 13303 || || || |||||||| ||||| |||| |||| ||| ||||| ||| | ||| Sbjct 6 ACCGAAAAGGATGATTCGGAACGCTTTGTCGTGTGGGAAGACGAAAACAACGTGAACATG 65 Query 13304 GAAAAAGCTGCACAAATTCAGATTAGTATTATGCAAT-----GGCAAGATGTTCCGCCCG 13358 || |||| |||||| |||| ||||| ||| |||| | || |||||| | | Sbjct 66 GACAAAGTAGCACAAGTTCAAATTAGCATTTGTCAATTTTCGGATAATATGTTCTGTACA 125 Query 13359 TAGAAGCGATGTCAGTTAGTGATTTAAAGTTTTGGAAAGTAAATTTAAATACCAAAAACG 13418 | | | | || | | |||||| || |||||||||| ||| | ||||| || | Sbjct 126 GACATGAG----CATTGA-TGATTTGAAAATTTGGAAAGTCAATATGAATACACAAGATA 180 Query 13419 ATCCGCCTTACATTTTTGATGCAAGAGACAAAATTATTATTGATACAGAAAAAAGTCTTG 13478 |||| ||||| |||||||||| |||| || | |||| ||||| || |||||||| Sbjct 181 ATCCTCCTTATATTTTTGATGTTGGAGATAAGGTGGTTATCGATACTGAGCGAAGTCTTG 240 Query 13479 TAACAATTAACGGTAAGAATGCAATTAATTTAAAAGACATTTTTAGTAATTTTCCAACTG 13538 || |||| || ||||| || || |||||||||||||| || || ||| ||| |||| || Sbjct 241 TATCAATCAATGGTAAAAAAGCTATTAATTTAAAAGATATATTCAGTGATTATCCAGTTG 300 Query 13539 TAATACGTGGCGAAAATTTAATCGAAATAATGCCACCAGATGTT---AAAGCGACCGTTA 13595 | | ||| ||| | | ||||| ||||| | ||||| | ||| | || | Sbjct 301 TTAGCGAAGGCTCAAACAAACTTGAAATTATGCCTTCCGATGTGGGGACAGCTAAAGTGA 360 Query 13596 GTTATAGGGAGAGATATAGATGAGAACACCAAGCGGCATTTTGCATGTTGTGGATTTTAA 13655 |||||||||| ||| | ||||||||||| || || || | ||| || | |||||| | Sbjct 361 TTTATAGGGAGCGATTCAAATGAGAACACCTAGTGGTATCCTTCATATTATTGATTTTCA 420 Query 13656 AACAGATCAAATCGTTGCAGCTATCCAGTCAAATGACTATTGGGATGACAAAAGGCATTG 13715 |||||||||||| || || |||| || | || || |||||| ||| | | ||||| Sbjct 421 AACAGATCAAATTGTGGCCACTATACAACCGAAAGATTATTGGAGTGATATTCGTCATTG 480 Query 13716 GGAACTGAAAAACAATGTTGATATGTTGGATTTTGCTGTCTTTGATGGAACAACTCATTC 13775 |||| | ||| | |||||||||| || || ||| || |||||| || ||| | Sbjct 481 GGAAATAAAAGATAATGTTGATACATTAGAGTTTAAAGTGTTTGATAATACGGAACATGC 540 Query 13776 GGCTACGTTACAACAACAAAATCTTGTTCTAAAAGAAGTTCGCGATGGAAGAGTTGTACC 13835 ||| | | || |||||| | || |||||||||| || |||||| | |||| || Sbjct 541 AGCTGCACTCATGCAGCAAAATTTAGTATTAAAAGAAGTGCGTGATGGACGGATTGTTCC 600 Query 13836 ATATGTCAT---TACAGAAACAGAGAAGAATTCA-GATAAACGATCCATTACCACATATG 13891 || || || || ||| | || ||| ||||| || | | |||| |||| | || Sbjct 601 TTACGTTATAAATAATGAAGCTGAAAAGGATTCAAGAGATA-GATCACTTACTGTACGTG 659 Query 13892 CTTCAGGAGCTTGGGTTCAAATTGCTAAATCAGGCATTATAAAACCACAAAGGATAGAAG 13951 |||| || ||||||||||||||||| ||| || ||| |||||| | ||||||| Sbjct 660 CTTCCGGTGCTTGGGTTCAAATTGCAAAAGACGGTTATATCCTGCCACAACGTATAGAAG 719 Query 13952 GTAAAACAGTAAACGAATTTATCGATATGGCTCTTGTAGGCATGAAATGGAAACGTGGAA 14011 ||||||||||||| | ||||| ||||||||||||||||| | ||| ||||||||||| | Sbjct 720 GTAAAACAGTAAATCAGTTTATGGATATGGCTCTTGTAGGTACGAAGTGGAAACGTGGCA 779 Query 14012 AAACAGATTATGCAGGATTCCATACGATGACCATTGATGAATTTATGGATCCGTTAACCT 14071 |||||| ||||| || |||||||| |||||||| ||| |||| ||||| | |||| Sbjct 780 GAACAGAGTATGCTGGTTTCCATACAATGACCATCGATACCATTATAGATCCTCTTACCT 839 Query 14072 TTTTGAAGAAAATAGCTTCTTTGTTCAAATTAGAAATTCAATATCGTGTTGAGGTTCAAG 14131 |||| ||||||||||||||||| ||| | ||||| |||||||| ||||| || || | Sbjct 840 TTTTAAAGAAAATAGCTTCTTTATTCGATTTAGAGATTCAATACCGTGTAGAAGTAGTCG 899 Query 14132 GGTCACAAATAGTTGGATGGTATGTCGATATGATTCAAAGGCGTGGCCGAGACACTGGCA 14191 | ||||| || ||||| ||||| || |||||| | ||| || || |||||| |||| Sbjct 900 GTTCACAGATTGTTGGCTGGTACGTGGATATGGTGAAAAAACGCGGTAGAGACATAGGCA 959 Query 14192 AAGAAATAGAGTTAGGTAAAGATTTGATAGGTGTTACACGTATTGAACATTCAAGAGATA 14251 | ||| || ||||| || ||||| | ||||||| ||||||||| ||||| || ||| Sbjct 960 AGGAAGTAACTTTAGGGAAGGATTTAGTTGGTGTTAAACGTATTGAGCATTCTAGGGATG 1019 Query 14252 TTTGTACAGCGTTAGTCGGATTTGTAAAAGGTGAAGGCGATAGTGTAATCACTATTGAAA 14311 ||||||| || ||||||||||| || | || ||||| | || | || || |||||| Sbjct 1020 TTTGTACTGCCTTAGTCGGATTCGTCCAGGGCGAAGGGGGTACCATTATTACAGTTGAAA 1079 Query 14312 GTATTAACAGGGGACTTCCGTATATTGTCGATAATGATGCATTTCAACGATGGAACGAAC 14371 | ||||| || | || |||||| |||| ||||| | |||||| |||||||| Sbjct 1080 GCATTAATGATGGTTTACCTTATATTACTGATAGCGATGCCTATCAACGCTGGAACGAGA 1139 Query 14372 GTGGTAAGCATAAGTTTGGTTTTTATACGCCAGAAACAGAAGAGTTAAATATGACGCCAC 14431 |||||| ||||| ||||| || || || |||||||||||||| ||||||||| ||| Sbjct 1140 ATGGTAAACATAAATTTGGCTTCTACACTCCAGAAACAGAAGAACAAAATATGACACCAA 1199 Query 14432 AACGTTTAATGACGTTAATGGAAATAGAACTGAAAAAACGTATTAATTCTTCAGTTTCGT 14491 | || | ||||| | ||| ||| ||| | ||||| ||||| |||| ||| | Sbjct 1200 AGCGGCTCATGACTCTTATGAAAACAGAGTTCGCTAAACGCGTTAATACTTCTGTTGTTT 1259 Query 14492 ATGAAGTAGAGGCACAATCAATCGGTCGAATTTTCGGACTAGCGCATGAACTAATCAATG 14551 | || ||||| ||| | | || || || | || |||||| | ||||| ||||| |||| Sbjct 1260 ACGATGTAGAAGCAGCAGCTATAGGGCGTGTATTTGGACTATCTCATGAGCTAATTAATG 1319 Query 14552 AAGGAGATACAATCCGAATCAAAGATACAGGCTTCACACCTAAGTTATACCTGGAAGCAC 14611 ||||||||||||| ||||| |||||||| || || ||||| || | || | ||||||| Sbjct 1320 AAGGAGATACAATTCGAATTAAAGATACTGGATTTACACCGAAACTTTATTTAGAAGCAC 1379 Query 14612 GTGTAATTGCCGGTGATGAATCTTTTACGGATCCTGAACAAGATAAATACGAATTTGGGG 14671 | | ||| || || ||||| || ||||| || ||| |||||||||||| | ||||| | Sbjct 1380 GGGCAATCGCTGGAGATGAGTCATTTACAGACCCTTCACAAGATAAATATGTGTTTGGCG 1439 Query 14672 ATTATAGAGAGATAGTAGACCAAAACGAGGAATTACGGAAGATTTACAACCGAATCCTTA 14731 | ||| | || || || | || || ||| | ||||| | || || || | ||| Sbjct 1440 ACTATCGTGAAATTACTGATCCGAATGAAGAAATGCGGAAATTGTATAATAGAGTACTTG 1499 Query 14732 GTAAATTCGGTGAGAAA------CAAGAAATGCTGGATCAGCTAGATAAATTGGTGAAAG 14785 | || ||| | ||| ||||| | | || || ||||| || || | ||| Sbjct 1500 CTTCTTTAGGTAATAAAGCCAATAAAGAACTATTAGAACAACTAGAAAAGTTAGCAGAAG 1559 Query 14786 AAGCGAATGAAACAGCAAGTAACGCT-AAGAAAGAATCAGAAGCAGCGAAAACACTTGCC 14844 ||||||| | ||||| | ||| || |||||||| || |||| || |||||| Sbjct 1560 AAGCGAAAGGGACAGCTGAACAAGCTCAAAAAAGAATCTCAAACAGCCAAGGAACTTGCT 1619 Query 14845 GAAAAGGTACAAGAGAATATTAAAAATAATACTGTTGAAATTATAGAAGCTAAGAATCCA 14904 |||||||| || || ||| | ||||||||||| || | ||||| |||||||| |||||| Sbjct 1620 GAAAAGGTCCAGGAAAATCTAAAAAATAATACGGTAAATATTATTGAAGCTAAAAATCCA 1679 Query 14905 CCGACAACAGGTCTTAAACCTAATAAAACGCTTTGGCGTGATATTAGTAACGGAAAGCCC 14964 ||||| ||||| | ||||||| | ||||| |||||||| || || || || Sbjct 1680 CCGACCGATAATCTTATAGTAGGTAAAACGTTATGGCGAGATATTAGCAATGGTAAACCT 1739 Query 14965 GGCATTTTAAAAATATGGACAGGTACAGCTTGGGAATCGGTTGTACCAGATGTTGAATCA 15024 || ||||||||| | |||| |||| || |||||| || | || ||||| ||| || Sbjct 1740 GGTATTTTAAAAGTGTGGAACGGTAAAGATTGGGAGCTCCTTATTCCTGATGTGGAAGCA 1799 Query 15025 GTTAAGAAAGAAACACTTGAGCAGGTTAATAAAAATATT 15063 |||||||||| || | |||||||| | ||| | ||| Sbjct 1800 ATTAAGAAAGATACGTTGGAGCAGGTGACAAAAGAGATT 1838 >seq24083 Length=1260 Score = 329 bits (364), Expect = 9e-86 Identities = 289/359 (81%), Gaps = 1/359 (0%) Strand=Plus/Minus Query 34312 ACAAAATTTGAATTTTATTAAAAAATGGAGGAATGAACCATGAATACAGTAATTATTCAA 34371 ||||||| |||||| | ||| |||| |||| ||||||||||| | |||| || Sbjct 807 ACAAAATAGTTATTTTAAAACGAAAGGGAG-AATGGGAAATGAATACAGTGACTATTAAA 749 Query 34372 TTCGGTCAAGGTACAGAAGCATGGAAGGATATGCGAGAGATTACGAAATTTCTACAAGAG 34431 || || |||||||||||||| ||||| ||||||| ||| | ||| |||| || || Sbjct 748 TTTGGACAAGGTACAGAAGCTTGGAAAGATATGCAAGAAGTAGTTAAAATTCTGCATGAC 689 Query 34432 AAAGGCTATTTCATTGAACCTTATGAAGAAATTGGATCTGTAAAACTAACTAAGAAAATC 34491 ||||| ||| | | |||||||||||||| ||| |||||||| |||||||||||||| Sbjct 688 AAAGGTTATAGTGCTCAGCCTTATGAAGAAATCGGAACTGTAAAATTAACTAAGAAAATC 629 Query 34492 AGTGACGAATTAGTGGATAAGAAAAGAAAATTCAATTGTGATCTTTGCTTTCAAAATAAG 34551 | || ||| ||||||||||||||| | ||||||||||||||||||||||| ||||||| Sbjct 628 AATGGCGAGTTAGTGGATAAGAAACGGCAATTCAATTGTGATCTTTGCTTTGAAAATAAA 569 Query 34552 GATATTGAAGAGAAATCAATTTATCAATTTGATGAAGGTGGCGACATTGTCGCATGCATG 34611 || |||||||| ||||| ||||||||||||||||||| || ||| |||| || || | Sbjct 568 GACATTGAAGAAAAATCTATTTATCAATTTGATGAAGAGGGTGACGTTGTAGCGTGTGTA 509 Query 34612 GATTGTGAGAAAAAAGCATTTGAACATTCAAAAAACTAAACCAAAGCGTTATTTTGTAG 34670 |||||||||||||| ||||||||||| |||||||||||||| ||| |||||||| || Sbjct 508 GATTGTGAGAAAAAGGCATTTGAACAATCAAAAAACTAAACAAAATTCTTATTTTGGAG 450 Score = 116 bits (128), Expect = 1e-21 Identities = 140/188 (74%), Gaps = 12/188 (6%) Strand=Plus/Minus Query 35904 TTAT-TTGGGTGAAAGTGAGGTGTAGGGGCTGGAATTAGTTTTTTGGATAGTTATCTTCA 35962 |||| ||| |||||| | |||| || |||| |||||||| |||||| ||||| | Sbjct 226 TTATCTTGTTTGAAAGCGGGGTGAAGATAATGGAGTTAGTTTTATGGATAATTATCGGTA 167 Query 35963 TTGTAATGGGCCAAATTGCTTGTACAAAGATGGATTTACAACAATT---------TTTAG 36013 || | | ||||| || | ||||| |||| |||||||| | || | ||||| Sbjct 166 TTTTGTTTGGCCACATCGTTTGTATAAAGCTGGATTTAAACCACTCGAAAAAACGTTTAG 107 Query 36014 ATACTTATAAGGAAATGCTGGTTATACAAAACAAAAAGATTGATGACTTATTGAGA-TAT 36072 ||||||||||||||||| ||| |||||||||| ||||||||||||| | ||| || ||| Sbjct 106 ATACTTATAAGGAAATGTTGGATATACAAAACGAAAAGATTGATGA-TGTTTGGGAGTAT 48 Query 36073 ATTAATAA 36080 |||| || Sbjct 47 GTTAAGAA 40 >seq49971 Length=731 Score = 165 bits (182), Expect = 2e-36 Identities = 188/252 (75%), Gaps = 3/252 (1%) Strand=Plus/Plus Query 12278 ACAGAAACGGAGGAACGTCGTATTGATGTTCCTCTTGTAATTAAAGCGAAAAAAGATATG 12337 |||||| |||| |||| ||||| || |||||| | ||||||| | ||||||| Sbjct 399 ACAGAAGTAGAGGCGCGTCAAATTGACGTGCCTCTTATTGTTAAAGC---ACAAGATATT 455 Query 12338 GCTGATTTACAAAAGGTAAAAGAAGATTTAGCGGATTGGCTTTATACAGAGCAACCTGCT 12397 ||||||||||| ||||| ||||||||||||||||||||| | |||||| || | Sbjct 456 GCTGATTTACAGAAGGTCAAAGAAGATTTAGCGGATTGGTTAATTACAGAACAGGAATGT 515 Query 12398 GAACTTGTTTTTGATGATGAATTAGATAGGACTTATCTAGCATTAATCGATGGTTCTGTT 12457 || | |||||||||| ||| |||| | || ||| |||| |||| ||||| || || Sbjct 516 GAGTTGATTTTTGATGACGAACCAGATCGCACGTATTTAGCCCTAATAGATGGATCGTTT 575 Query 12458 GACTTGGATGAAATAATTAATAGAGGTAAAGGCGTTATTACTTTTGTTTGTCCAATGCCA 12517 ||| || ||| || | ||| | || ||||| || |||| ||| ||||| ||||||| Sbjct 576 GACGCAGAAGAATTAGTGAATCGTGGAAAAGGTGTAGTTACATTTATTTGTACAATGCCG 635 Query 12518 TATAAATTAGGA 12529 |||||||||||| Sbjct 636 TATAAATTAGGA 647 >seq10747 Length=2380 Score = 114 bits (126), Expect = 3e-21 Identities = 173/246 (70%), Gaps = 0/246 (0%) Strand=Plus/Minus Query 31890 TAAAAAGACTTCTTGTCACAAGTTTGAAACTTGCGACATGGAGCATGCCAAATTGTTATT 31949 ||||||||||||||||||||||||| ||||| ||||||||| | || | |||||||| Sbjct 1230 TAAAAAGACTTCTTGTCACAAGTTTTCAACTTTCGACATGGATAACGCTAGGTTGTTATT 1171 Query 31950 CCAGTTAATTTTAGAAACCAATCCAGAACATAAAGAGCCGAACTTCGAGAAGTGGGCCAA 32009 | ||||| ||| ||| ||||||| | || || || ||||| || || ||||| | Sbjct 1170 TGAATTAATGTTACAAAACAATCCATCAGCAAAGGAACCTAACTTAGATAAATGGGCAGA 1111 Query 32010 TGAATTCCGCTTAATTCGCGAAAGAGACAAGAAAACAAATCAACAAATTGTGTATCTCTT 32069 ||| || || ||||| | ||| | || || | |||| || || |||| ||| || | Sbjct 1110 TGACTTTCGTTTAATGAGAGAACGCGATAACAGAACAGATGAAGCAATTAAGTACCTTAT 1051 Query 32070 GGAATGGTCTCAGGATCATTCCTTCTGGaaaaaaaaTATATTGTCACCTAGTAAGTTGAG 32129 | ||| | || | || | || |||| || || ||| | || || ||| || || Sbjct 1050 TAACTGGACACAAAACGATACATTTTGGAGAACTAACATACTTTCTCCAGCTAAATTAAG 991 Query 32130 AAAGCA 32135 ||| || Sbjct 990 AAAACA 985 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 134124754462116