Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq295 181 2e-40 seq210 158 2e-33 >seq295 Length=381392 Score = 181 bits (200), Expect = 2e-40 Identities = 435/650 (67%), Gaps = 21/650 (3%) Strand=Plus/Plus Query 48041 AACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTGCTTAACGCGGGACTCTGAGGGT 48100 |||||| |||| || | ||||| || | | ||| ||| | |||| ||| ||| | Sbjct 144473 AACTCCCTCTCGATGTCAACGGCGTCGGCGATGATCGACTTGATGCGGTCCTCAGAGAGC 144532 Query 48101 TTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCC 48160 ||| | ||| | || ||||| | |||||| ||||| | ||| | ||| ||||| Sbjct 144533 TTGCGGTTGAGGAG---GGAGTAGAGGAGGCAGGCGAAGTCGCAGTGGAGGCCCTCGTCG 144589 Query 48161 CGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAG 48220 ||| ||||||| ||||||||||| |||||| ||||||| || | || ||||||||| Sbjct 144590 CGGGAGATGAGCTCGTTGGAGAAGGTGAGACCCGGCATGAGGCCGCGCTTCTTGAGCCAG 144649 Query 48221 AAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGC 48280 || || | ||| ||||| ||||||||||| ||||| || || || ||||| || Sbjct 144650 AAGATAGAGCAGAAGGAGCCGGAGAAGAAGATCCCCTCAACGGCGGCAAACGCAACTAGA 144709 Query 48281 CTCTCTCCGAAAGAAGCGTTCTTGTCTGA---GATCCAGGAAAGCGCCCAGTCTGCCTTC 48337 | ||| |||| || ||| | | || |||||| ||| ||||| | |||||| Sbjct 144710 CGCTCGGCGAAGGA----TTC--GGCGGACCCGATCCACCGAAGGGCCCACTGGGCCTTC 144763 Query 48338 TTCTTGA-TGCATGGCATCGTCTCTATGGCCCGGAAGAG--CTTCTTGCACTCACCTGCG 48394 || | | ||| || | ||||| | ||| ||||| || |||| || ||| Sbjct 144764 TTGGTCACTGC-CGGGACGGTCTCGACGGCGCGGAAAAGGCGATCTT--TTTCGTCTGGA 144820 Query 48395 TCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCAGAGTGCACATTCTCTATAGCG 48454 ||| | |||| ||| || | ||||||||| ||||| | ||||| || ||| Sbjct 144821 TCCTTGATGTAGGATTCGAGGAGGAGGGAGTACATCTCGGAGTGGATGTTCTCGATCGCG 144880 Query 48455 ATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAATCTCTCC 48514 |||||||| ||||||||||| | |||||| | ||| || || | ||| | Sbjct 144881 ATCTGGAAGCCGTAGAAGGCGCGGGCCTCGGGAATCTGGACGTCGGACATGAAGCGGATG 144940 Query 48515 AGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGACATGTTTAAGG 48574 || ||||| ||| || ||||| || || || |||||||| |||| || | | Sbjct 144941 GCGAGGTTCTCGAGGACGATGCCATCGGAGGCGGCGAAGAAGGCGAGGATGTGGGAGATG 145000 Query 48575 AAATGGCGCTCGTTGTGGGTGAGAGCAT---TCCAGCCCTGTACGTCTTTGCCCAGGTCC 48631 || |||||||| | || |||||| | | |||| | | ||| || ||||| Sbjct 145001 AAGTGGCGCTCATCGTTGGTGAGGGAGTGGAGCCAGTGGGGGAGGTCACTGGAGAGGTCG 145060 Query 48632 ACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTACATGCCCCA 48681 || || || | ||||| ||||| ||||| || || |||||||| |||| Sbjct 145061 ACCTCCTCGGCGGTCCAAAAGGAGGCGAGGGCCTTCTTGTACATCTCCCA 145110 >seq210 Length=498004 Score = 158 bits (174), Expect = 2e-33 Identities = 563/872 (65%), Gaps = 31/872 (4%) Strand=Plus/Plus Query 47821 CACCGCCGCTGTCTTGACCTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCC 47880 ||||||||| ||| |||||||||||| || || ||||| || || || |||||||| Sbjct 321829 CACCGCCGC---CTT---CTGGTAGTCCCCGACCCTCTTCTCGAAAAAATTAGTCTTCCC 321882 Query 47881 CTCCAACGAGATGTTCTCCATGAAGAGGAAGGGGTTGGGTGTGTTATACA----CCCGTG 47936 | | ||| || |||||| | ||| || || | || |||| |||| Sbjct 321883 TTGGAGCGATATCAGCTCCATCCAATCGAACGGATTCGCTGCCCCGTACAACTTCCCGCA 321942 Query 47937 TCAGGCCCATCTGTTCCAGCAGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGG 47996 || ||| | ||| || ||||||| ||| |||||||||||| ||| | Sbjct 321943 TC----CCAACGCCCCCAAGAGACGATCCGCCACGAACTCGATGTATTGGCTCATCAAAT 321998 Query 47997 TGATGTTCATGCCTATGAGGGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCT 48056 ||||| || | || | ||||||||| || | || |||||| |||| || | Sbjct 321999 CCCCATTCATCCCCACAAGCGCCACGGGCAACGCGTCGCAGACGAACTCCCTCTCGATGT 322058 Query 48057 GCACGGCTTCCCCCACAATCTGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCT 48116 || || || | | ||| ||| | |||| ||| | | | ||| | ||| | Sbjct 322059 CGACAGCGTCGGCGATGATCGACTTGATGCGGTCCTCGGGGAGCTTGCGGTTGAGGAG-- 322116 Query 48117 TGGCATAGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGT 48176 || ||||| | |||||| ||||| | ||| | ||| ||||| ||| ||||||| ||| Sbjct 322117 -GGAGTAGAGGAGGCAGGCGAAGTCGCAGTGGAGGCCCTCGTCGCGGGAGATGAGCTCGT 322175 Query 48177 TGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAG 48236 ||||||| ||| || ||||||| || | || ||||||||||| || | ||| | Sbjct 322176 TGGAGAAAGTGAGGCCCGGCATGAGGCCTCGCTTCTTGAGCCAGAAGATGGAGCAGAAGG 322235 Query 48237 AGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAG 48296 |||| ||||||||||| || || || || ||||| || ||| | ||| ||||||| Sbjct 322236 AGCCGGAGAAGAAGATCCCTTCAACAGCGGCGAAGGCCACGAGGCGCTCCGCGAAAGA-- 322293 Query 48297 CGTTC-TTGTCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATC 48355 || | | ||| |||||| |||||||| | ||||||||| | || | | Sbjct 322294 -GTCCGAGGACTG-GATCCACCGGAGCGCCCACTGGGCCTTCTTCGCCACCGCCGGAACC 322351 Query 48356 GTCTCTATGGCCCGGAA---GAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTG 48412 ||||| | ||| || || | | | ||| || | | ||| | |||| Sbjct 322352 GTCTCGACGGCACGAAAAAGGCGGTCCTT---TTCGTCAGGGTCTTTGATGTAGGATTCC 322408 Query 48413 AGCAGCTTTGCGTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAG 48472 |||| | |||| ||| ||||| | || || || || |||||||| ||||| ||| Sbjct 322409 AGCAAAAGAGAATACAACTCGGAGTGGATGTTTTCGATGGCTATCTGGAAGCCGTAAAAG 322468 Query 48473 GCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACT 48532 || | |||||| | ||| || || | ||| | | || ||||| ||| Sbjct 322469 GCGCGGGCCTCGGCGATCTGGACGTCGGACATGAAGCGGGCGGCTAGGTTCTCGAGGACG 322528 Query 48533 ATCCCATCTGAAGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGG 48592 || || || || || || |||||||| ||||| || | ||| |||||||||| | || Sbjct 322529 ATACCGTCAGAGGCGGCGAAGAAGGCGAGGACGTGGGAGATGAAGTGGCGCTCGTCGGGG 322588 Query 48593 GTGAGAGCAT---TCCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAG 48649 ||||| | | |||| | | ||| | ||||| || || || | |||||| Sbjct 322589 GTGAGGGTGTGGAGCCAGTGGGGGAGGTCGGCGGAGAGGTCGACCTCCTCGGCTGTCCAG 322648 Query 48650 AAGGACGCGAGTGCTTTTTTGTACATGCCCCA 48681 || || |||| || || |||||||| |||| Sbjct 322649 AAAGAGGCGACGGCCTTCTTGTACATCTCCCA 322680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 930597576001280