Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24]
80,317 sequences; 556,480,649 total letters
Query= NC_019544.1
Length=49335
Score E
Sequences producing significant alignments: (Bits) Value
seq14923 322 2e-83
>seq14923
Length=1810
Score = 322 bits (356), Expect = 2e-83
Identities = 741/1100 (67%), Gaps = 32/1100 (3%)
Strand=Plus/Plus
Query 1055 ATGTGGGCAATGGACACATTCAACGAGCAAAACTTCGGCATGGCAGGAAAGACGATCGGA 1114
|||||||||||||| ||||| | | | ||||| |||||| || || ||||| ||
Sbjct 1 ATGTGGGCAATGGAATCATTCGAAGGCGAGAACTTTGGCATGTGTGGTAAAACGATTGGC 60
Query 1115 GCATTGCGCCGAAACGTCATTACGCCGCTCAAACGGATGCTCAAATCGAGGGGATACAGA 1174
| || || ||||| || ||||| || ||| |||| | || || | || || |
Sbjct 61 TCGCACCGTCGTAACGTTATAACGCCACTTAAAAAGATGTTAAAGTCTCGTGGTTATAAG 120
Query 1175 GTCAAAGATCATCGAGCGGACAACTATT-TGACGATTACGTTCAAAGGAAAAACAAACTA 1233
|| || || |||||| || || ||| | || ||||| | || ||||||||
Sbjct 121 GTTAAGGACCATCGAAGTGAGAA-TATGCTTACTATTACTAAAGATGGTGTAACAAACTT 179
Query 1234 CTTTTACCTATTTGGTGGAAAAGACGAATCATCCCAAGACCTCATTCAAGGGATTACGCT 1293
||||| | |||||||| ||||| ||| | || || || || || ||||| ||||| |
Sbjct 180 TTTTTATATTTTTGGTGGTAAAGATGAAGCGTCACAGGATCTTATCCAAGGTATTACTTT 239
Query 1294 TGCCGGAATGTTCTTTGATGAAGTAGCGCTCATGCCGGAATCCTTTGTCAACCAAGCAAC 1353
|| ||| |||||||||||||||| ||| ||| || ||||| |||||||||||
Sbjct 240 AGCAGGATGTTTCTTTGATGAAGTAGTGCTTATGGTTCGTTCATTTGTTAACCAAGCAAC 299
Query 1354 CGCTCGTTGTTCCGTCGATGGAGCGAAGCTATGGTTCAACTGTAACCCAGCGGGACCGTA 1413
| |||||||| || || || | || | ||||| ||||||||||| | || || ||
Sbjct 300 TGGGCGTTGTTCTGTAGAAGGTTCAAAAGTCTGGTTTAACTGTAACCCTGGTGGGCCATA 359
Query 1414 CCATTGGTTTAAGGTCGAATACTTGGATAAACTCGATGAGAAAAACTTGCTTCATTTGCA 1473
|||||||||||| |||| | ||||| | || || ||||| || || | |
Sbjct 360 CCATTGGTTTAAAACAGAATGGCTAGATAAGGCGAAAGAAAAGAACTTACTACACATTCG 419
Query 1474 TTTTACGATGGATGACAATTTGTCGTTGTC-AAAGCAAGTAAAAGAGCGGTATCAGCGGA 1532
|||||||||||||| || || |||||||| | | |||||||| |||| ||| | ||
Sbjct 420 CTTTACGATGGATGATAACTTATCGTTGTCTAGAAAAAGTAAAACAGCGTTATTACAAGA 479
Query 1533 TGTACAAAGGCGTTTTCTATCAA-CGATACATTCTTGGGCTATGGG-TGCTGGCGGAAGG 1590
|||| | |||||||||| |||| | || ||| | ||||| |||| ||| || ||
Sbjct 480 TGTATAGCGGCGTTTTCT-TCAAGAGGTATATTTTAGGGCTTTGGGCAGCT-GCTTCCGG 537
Query 1591 AATTATCTATGACATGTTCGATCAAGATGAGCATGTCGTTCCAACGGTGCCGCGCCCATA 1650
|||| | || ||||| ||| | ||| | ||| || || ||| | | | ||
Sbjct 538 GCTTATATTCGATATGTTTGATGAGGATAAACATAAAGTACCTACGATACAAAGAGAGTA 597
Query 1651 TGAAAAATACTATGTATCGTGTGACTATGGGACGCAAAACCCGACGACATTTGGATTGTG 1710
|| | |||| || || ||||||||||| ||||| ||| | | | || ||| || ||
Sbjct 598 TGTTGAGTACTTCGTTTCATGTGACTATGGTACGCAGAACGCTATGGTATATGGTTTATG 657
Query 1711 GG------GACTTTACAACGGC------GTATGGTACAAGGTGAAAGAGTACCACTATGA 1758
|| | | | || ||| ||||||||||||||||||||||||| |||
Sbjct 658 GGGTAAGTGCATCGAAAAAGGCGAAGAAGTATGGTACAAGGTGAAAGAGTACCGTTATAG 717
Query 1759 TGGCCGAAAAGAAAACAAACAGAAGACAGACCAAGAGTATTACGAGGACTTGATGAAGTT 1818
|| || || | | || ||||| |||||||| || || || |||||||| || ||
Sbjct 718 CGGTAGAGAAACAGAAAAGCAGAAAACAGACCAGGAATACTATGAGGACTTTGAAAAATT 777
Query 1819 CATTGAAGATATTGAAAAACACAAATTCAAAGGCGTGATTGTGGACCCGTCAGCCGCTTC 1878
| | | |||| ||| | ||| | | || | || |||||||| ||||||||
Sbjct 778 CGTAGGAGAT-TTG-------CCAATCCGTGGTACTG-TAGTTGACCCGTCCGCCGCTTC 828
Query 1879 ATTTATTGCGTTATTGCGGCAGAAAGGGA-TCAAAGTCATCAAAGCAAAGAATGACGTCC 1937
|||||| || ||||| | ||||| | ||||| || || ||| | |||
Sbjct 829 ATTTATAGCTTTATT-AGTTAGAAATAAACGAAAAGTATATAAGGCCCGAAATAATGTCA 887
Query 1938 TGGATGGAATCCGAAATGTAGCAACAGCGCTAAACAAAAAGATGATTCTCTACAATGATT 1997
|| || || | ||||| | ||||| |||| || ||| | || || |
Sbjct 888 AAGAGGGTATTGGTAATGTCGGTGTTGCGCTTAACACGGGCATTATTTATTTTAACGACT 947
Query 1998 GCTGTAAAGAAACATTCCGGGAATATAGC-TCTTATGTATGGGATGAAAAAGCGGCAGAG 2056
|||| || |||||||| || | | || |||||| |||||||||| ||| | | |||
Sbjct 948 GCTGCAATGAAACATTTAAAGAGT-TCGCTTCTTATATATGGGATGAGAAATCTGTAGAA 1006
Query 2057 CGGGGCGAGGATAAACCGGTGAAACAGAATGATCACCAATTAGACGCTGATCGTTATTTT 2116
|| || ||||||||||| ||||| ||||||| ||||| | |||| | || |||
Sbjct 1007 CGTGGTGAGGATAAACCACTGAAAGAGAATGACCACCACATGGACGAAACAAGATACTTT 1066
Query 2117 GTTAATACAATTTTATTTGG 2136
|||| ||||| |||||||
Sbjct 1067 ATTAACACAATCATATTTGG 1086
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 157599943288338
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |