Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= NC_019544.1 Length=49335 Score E Sequences producing significant alignments: (Bits) Value seq14923 322 2e-83 >seq14923 Length=1810 Score = 322 bits (356), Expect = 2e-83 Identities = 741/1100 (67%), Gaps = 32/1100 (3%) Strand=Plus/Plus Query 1055 ATGTGGGCAATGGACACATTCAACGAGCAAAACTTCGGCATGGCAGGAAAGACGATCGGA 1114 |||||||||||||| ||||| | | | ||||| |||||| || || ||||| || Sbjct 1 ATGTGGGCAATGGAATCATTCGAAGGCGAGAACTTTGGCATGTGTGGTAAAACGATTGGC 60 Query 1115 GCATTGCGCCGAAACGTCATTACGCCGCTCAAACGGATGCTCAAATCGAGGGGATACAGA 1174 | || || ||||| || ||||| || ||| |||| | || || | || || | Sbjct 61 TCGCACCGTCGTAACGTTATAACGCCACTTAAAAAGATGTTAAAGTCTCGTGGTTATAAG 120 Query 1175 GTCAAAGATCATCGAGCGGACAACTATT-TGACGATTACGTTCAAAGGAAAAACAAACTA 1233 || || || |||||| || || ||| | || ||||| | || |||||||| Sbjct 121 GTTAAGGACCATCGAAGTGAGAA-TATGCTTACTATTACTAAAGATGGTGTAACAAACTT 179 Query 1234 CTTTTACCTATTTGGTGGAAAAGACGAATCATCCCAAGACCTCATTCAAGGGATTACGCT 1293 ||||| | |||||||| ||||| ||| | || || || || || ||||| ||||| | Sbjct 180 TTTTTATATTTTTGGTGGTAAAGATGAAGCGTCACAGGATCTTATCCAAGGTATTACTTT 239 Query 1294 TGCCGGAATGTTCTTTGATGAAGTAGCGCTCATGCCGGAATCCTTTGTCAACCAAGCAAC 1353 || ||| |||||||||||||||| ||| ||| || ||||| ||||||||||| Sbjct 240 AGCAGGATGTTTCTTTGATGAAGTAGTGCTTATGGTTCGTTCATTTGTTAACCAAGCAAC 299 Query 1354 CGCTCGTTGTTCCGTCGATGGAGCGAAGCTATGGTTCAACTGTAACCCAGCGGGACCGTA 1413 | |||||||| || || || | || | ||||| ||||||||||| | || || || Sbjct 300 TGGGCGTTGTTCTGTAGAAGGTTCAAAAGTCTGGTTTAACTGTAACCCTGGTGGGCCATA 359 Query 1414 CCATTGGTTTAAGGTCGAATACTTGGATAAACTCGATGAGAAAAACTTGCTTCATTTGCA 1473 |||||||||||| |||| | ||||| | || || ||||| || || | | Sbjct 360 CCATTGGTTTAAAACAGAATGGCTAGATAAGGCGAAAGAAAAGAACTTACTACACATTCG 419 Query 1474 TTTTACGATGGATGACAATTTGTCGTTGTC-AAAGCAAGTAAAAGAGCGGTATCAGCGGA 1532 |||||||||||||| || || |||||||| | | |||||||| |||| ||| | || Sbjct 420 CTTTACGATGGATGATAACTTATCGTTGTCTAGAAAAAGTAAAACAGCGTTATTACAAGA 479 Query 1533 TGTACAAAGGCGTTTTCTATCAA-CGATACATTCTTGGGCTATGGG-TGCTGGCGGAAGG 1590 |||| | |||||||||| |||| | || ||| | ||||| |||| ||| || || Sbjct 480 TGTATAGCGGCGTTTTCT-TCAAGAGGTATATTTTAGGGCTTTGGGCAGCT-GCTTCCGG 537 Query 1591 AATTATCTATGACATGTTCGATCAAGATGAGCATGTCGTTCCAACGGTGCCGCGCCCATA 1650 |||| | || ||||| ||| | ||| | ||| || || ||| | | | || Sbjct 538 GCTTATATTCGATATGTTTGATGAGGATAAACATAAAGTACCTACGATACAAAGAGAGTA 597 Query 1651 TGAAAAATACTATGTATCGTGTGACTATGGGACGCAAAACCCGACGACATTTGGATTGTG 1710 || | |||| || || ||||||||||| ||||| ||| | | | || ||| || || Sbjct 598 TGTTGAGTACTTCGTTTCATGTGACTATGGTACGCAGAACGCTATGGTATATGGTTTATG 657 Query 1711 GG------GACTTTACAACGGC------GTATGGTACAAGGTGAAAGAGTACCACTATGA 1758 || | | | || ||| ||||||||||||||||||||||||| ||| Sbjct 658 GGGTAAGTGCATCGAAAAAGGCGAAGAAGTATGGTACAAGGTGAAAGAGTACCGTTATAG 717 Query 1759 TGGCCGAAAAGAAAACAAACAGAAGACAGACCAAGAGTATTACGAGGACTTGATGAAGTT 1818 || || || | | || ||||| |||||||| || || || |||||||| || || Sbjct 718 CGGTAGAGAAACAGAAAAGCAGAAAACAGACCAGGAATACTATGAGGACTTTGAAAAATT 777 Query 1819 CATTGAAGATATTGAAAAACACAAATTCAAAGGCGTGATTGTGGACCCGTCAGCCGCTTC 1878 | | | |||| ||| | ||| | | || | || |||||||| |||||||| Sbjct 778 CGTAGGAGAT-TTG-------CCAATCCGTGGTACTG-TAGTTGACCCGTCCGCCGCTTC 828 Query 1879 ATTTATTGCGTTATTGCGGCAGAAAGGGA-TCAAAGTCATCAAAGCAAAGAATGACGTCC 1937 |||||| || ||||| | ||||| | ||||| || || ||| | ||| Sbjct 829 ATTTATAGCTTTATT-AGTTAGAAATAAACGAAAAGTATATAAGGCCCGAAATAATGTCA 887 Query 1938 TGGATGGAATCCGAAATGTAGCAACAGCGCTAAACAAAAAGATGATTCTCTACAATGATT 1997 || || || | ||||| | ||||| |||| || ||| | || || | Sbjct 888 AAGAGGGTATTGGTAATGTCGGTGTTGCGCTTAACACGGGCATTATTTATTTTAACGACT 947 Query 1998 GCTGTAAAGAAACATTCCGGGAATATAGC-TCTTATGTATGGGATGAAAAAGCGGCAGAG 2056 |||| || |||||||| || | | || |||||| |||||||||| ||| | | ||| Sbjct 948 GCTGCAATGAAACATTTAAAGAGT-TCGCTTCTTATATATGGGATGAGAAATCTGTAGAA 1006 Query 2057 CGGGGCGAGGATAAACCGGTGAAACAGAATGATCACCAATTAGACGCTGATCGTTATTTT 2116 || || ||||||||||| ||||| ||||||| ||||| | |||| | || ||| Sbjct 1007 CGTGGTGAGGATAAACCACTGAAAGAGAATGACCACCACATGGACGAAACAAGATACTTT 1066 Query 2117 GTTAATACAATTTTATTTGG 2136 |||| ||||| ||||||| Sbjct 1067 ATTAACACAATCATATTTGG 1086 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157599943288338