Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq33 100 1e-16 >seq33 Length=1606457 Score = 100 bits (110), Expect = 1e-16 Identities = 159/226 (70%), Gaps = 4/226 (2%) Strand=Plus/Plus Query 26060 AAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACT 26119 ||| |||||||||| || || || |||||||| || || | ||||| ||||| ||||| Sbjct 1148389 AAATTACCTTTTCTCTTGCCACCCCCTTGATCAACATAACGAGCAGTATCATTAAAAACC 1148448 Query 26120 TTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTC 26179 ||||||||||||| | ||| | || || ||||| | | | || | || || Sbjct 1148449 CTCAACATTGGAACAATGCCATTAGATGTCCCATTTGTCCCACGGATATAACTACCAGTT 1148508 Query 26180 GATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAA 26239 | | ||||| ||||||| || || ||||| ||||| |||| ||| | ||||| Sbjct 1148509 GCACGAATATTGTGAGCAGATATGCCAATTCCTCCAGCAGATTTGCTTATAACAGCACAT 1148568 Query 26240 TC--TGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCAT 26283 || | ||| ||||| | ||||| | ||||||||| ||||||| Sbjct 1148569 TCCTTTAAA--GTATCATATATTCCCTCAATGCTATCATCTTTCAT 1148612 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 252792308395775