Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq295 127 2e-24 seq210 105 8e-18 seq9 98.7 1e-15 >seq295 Length=381392 Score = 127 bits (140), Expect = 2e-24 Identities = 118/150 (79%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 65068 TCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCA 65127 |||||||||||||| || |||||||||| || ||||| |||||||||||||| || Sbjct 144723 TCCTTCGCCGAGCGTCTAGTTGCGTTTGCCGCCGTTGAGGGGATCTTCTTCTCCGGCTCC 144664 Query 65128 TTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAAT 65187 |||||| |||| | ||| | |||||||| || |||||||| || || |||||| || Sbjct 144663 TTCTGCTCTATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCGGGTCTCACCTTCTCCAAC 144604 Query 65188 GAACTTATTTCCCGAGATGAGGGTCTCCAC 65217 || || || ||||| || ||||| |||||| Sbjct 144603 GAGCTCATCTCCCGCGACGAGGGCCTCCAC 144574 >seq210 Length=498004 Score = 105 bits (116), Expect = 8e-18 Identities = 114/151 (75%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 65067 CTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTC 65126 ||| ||||| |||||||| | || || || ||| || || |||||||||||||| || Sbjct 322294 CTCTTTCGCGGAGCGCCTCGTGGCCTTCGCCGCTGTTGAAGGGATCTTCTTCTCCGGCTC 322235 Query 65127 ATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAA 65186 |||||| | || | ||| | |||||||| || |||||||| ||||| ||||| || Sbjct 322234 CTTCTGCTCCATCTTCTGGCTCAAGAAGCGAGGCCTCATGCCGGGCCTCACTTTCTCCAA 322175 Query 65187 TGAACTTATTTCCCGAGATGAGGGTCTCCAC 65217 || || || ||||| || ||||| |||||| Sbjct 322174 CGAGCTCATCTCCCGCGACGAGGGCCTCCAC 322144 >seq9 Length=2675258 Score = 98.7 bits (108), Expect = 1e-15 Identities = 215/318 (68%), Gaps = 8/318 (3%) Strand=Plus/Minus Query 175276 GGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTC 175335 || |||||||||||| |||| ||| | | ||| || || || |||||||| ||| Sbjct 1603582 GGCGCCAAGATCCCCAAAGGCTGCCTCTTGGTCGGTCCTCCCGGCACCGGAAAGACTCTC 1603523 Query 175336 CTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTCATCCAGTGCTCTGCCGCAAAC 175395 || ||||| ||| | || || || | || || ||| || ||| | ||| | | Sbjct 1603522 CTTGCCCGGGCCGTGGCCGGCGAGGCCGGGGTGCCCTTCTTCTCCTGCGCCGCCTCCGAA 1603463 Query 175396 TTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGCC 175455 || |||||| | || || || || || || |||| || ||| | || || | ||| Sbjct 1603462 TTCGTGGAGCTCTTCGTGGGAGTTGGAGCTTCTCGGGTCCGGGATTTGTTCGAGAAGGCC 1603403 Query 175456 CG--CGAAAATCAACCATGTATTGTCTTCATTGATGAGATTGATGCGGTGGGCAAGCAAC 175513 ||||| | || || ||||||||||| || ||||||||||||||||| | ||| | Sbjct 1603402 AAGTCGAAAGCC--CCCTGCATTGTCTTCATCGACGAGATTGATGCGGTGGGGAGGCAGC 1603345 Query 175514 GCAGCGCTGG--TGGTATGCCAGCAAATGACGAGAGAGAACAAACAATTAATCAACTACT 175571 || | || || | | | | | ||||| ||||| || || || || ||||| || | Sbjct 1603344 GCGGTGCCGGTCTCGGAGG--TGGGAATGATGAGAGGGAGCAGACTATCAATCAGCTCTT 1603287 Query 175572 CACCGAGATGGATGGCTT 175589 || || |||||||| || Sbjct 1603286 GACGGAAATGGATGGTTT 1603269 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595970666492960