Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq129 104 5e-17 >seq129 Length=753513 Score = 104 bits (114), Expect = 5e-17 Identities = 163/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATC 192365 || ||||| | ||| || | || ||||| | ||||| ||| ||| || || ||||| || Sbjct 556225 ATCCCACCCCGAAGCCGGAGGACCAAATGAAGAGTAGACTCCTTTTGA-ATGTTATAGTC 556283 Query 192366 AGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGG 192425 | | || || |||| |||| ||||||||||||||||| | ||||| ||||| || Sbjct 556284 CGCCAGCGTGCGCCCATCCTCCAGCTGTTTACCAGCAAAGATGAGCCTCTGCTGATCCGG 556343 Query 192426 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTC 192485 || || || || || || || || ||| || |||||| || | || || || Sbjct 556344 GGGAATGCCCTCCTTGTCCTGAATCTTAGCCTTCACATTATCAATCGTGTCGGAGCTCTC 556403 Query 192486 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| ||||| ||||| || ||||| | || || | ||| |||||||| Sbjct 556404 AACTTCCAGAGTGATGGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCAT 556454 Score = 100 bits (110), Expect = 6e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368 |||||| | |||||| | || | ||| | ||| | || || ||| ||||| || | Sbjct 555999 ACCACCACGAAGACGCAGGACAAGATGGAGAGTGGATTCCTTCTGGATGTTATAGTCTGC 556058 Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428 | || || |||| || | || || |||||||| || | ||||| |||||||| || Sbjct 556059 CAGGGTACGCCCATCCTCAAGCTGCTTCCCAGCAAAAATGAGCCTCTGCTGATCAGGAGG 556118 Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488 || |||||||| ||||| || || || |||||| || | ||||| || || Sbjct 556119 GATCCCTTCTTTGTCTTGGATCTTGGCCTTGACATTATCGATGGTGTCTGAGCTCTCCAC 556178 Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||| ||||| ||||| || ||||| | || || | |||||||||||| Sbjct 556179 TTCCAGAGTGATGGTCTTCCCAGTGAGGGTCTTCACAAATATCTGCAT 556226 Score = 91.5 bits (100), Expect = 3e-13 Identities = 159/230 (69%), Gaps = 1/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || |||||||| || || | || | || | || | |||||| ||| || |||||| Sbjct 556453 ATGCCACCTCTGAGCCGAAGGACAAGGTGAAGCGTTGACTCTTTCTGGATGTTGTAATCA 556512 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | || || || |||| || | |||||| ||||||||||| | ||||| || || || Sbjct 556513 GCCAAAGTGCGGCCATCCTCAAGTTGTTTGCCAGCAAAGATGAGCCTCTGCTGGTCCGGG 556572 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || || || || ||||| || ||| || |||||| || | || || || Sbjct 556573 GGAATGCCCTCCTTGTCTTGAATCTTAGCCTTCACATTATCAATCGTGTC-GAGCTCTCA 556631 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| || || ||||| || ||||| | || || | ||| |||||||| Sbjct 556632 ACTTCCAGGGTGATGGTCTTGCCAGTAAGGGTCTTCACAAAGATCTGCAT 556681 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 983466909472950