Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24]
80,317 sequences; 556,480,649 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq129 87.8 3e-12
>seq129
Length=753513
Score = 87.8 bits (96), Expect = 3e-12
Identities = 107/146 (73%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 171924 TGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATT 171983
|| || ||||||||||| | ||||| || ||||| || || |||||||| ||||| ||
Sbjct 556081 TGCTTCCCAGCAAAAATGAGCCTCTGCTGATCAGGAGGGATCCCTTCTTTGTCTTGGATC 556140
Query 171984 TTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCA 172043
|| || |||||| || || ||||| || ||||| ||||| ||||| || |||
Sbjct 556141 TTGGCCTTGACATTATCGATGGTGTCTGAGCTCTCCACTTCCAGAGTGATGGTCTTCCCA 556200
Query 172044 GTTAATGTTTTAATGAATATCTGCAT 172069
|| | || || | |||||||||||
Sbjct 556201 GTGAGGGTCTTCACAAATATCTGCAT 556226
Score = 86.0 bits (94), Expect = 1e-11
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|| ||||| | ||| || | || ||||| | ||||| ||| || ||| ||||| ||
Sbjct 556225 ATCCCACCCCGAAGCCGGAGGACCAAATGAAGAGTAGACTCCTTTTGAATGTTATAGTCC 556284
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
| | | || | || |||| |||||||||||||| || | ||||| || || ||
Sbjct 556285 GCCAGCGTGCGCCCATCCTCCAGCTGTTTACCAGCAAAGATGAGCCTCTGCTGATCCGGG 556344
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || || || || || || || ||| || |||||| || || || || ||
Sbjct 556345 GGAATGCCCTCCTTGTCCTGAATCTTAGCCTTCACATTATCAATCGTGTCGGAGCTCTCA 556404
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
||||| ||||| ||||| || ||||| | || || | || ||||||||
Sbjct 556405 ACTTCCAGAGTGATGGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCAT 556454
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 904227277398600
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |