Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= NC_021794.1 Length=71443 Score E Sequences producing significant alignments: (Bits) Value seq4841 127 9e-25 >seq4841 Length=6572 Score = 127 bits (140), Expect = 9e-25 Identities = 365/555 (66%), Gaps = 20/555 (4%) Strand=Plus/Minus Query 14959 GTATTTAGTTGTTTTGCTTGCGGTGGTGGTTCTACAATGGGTTATAAACTTGCAGGTTTT 15018 ||||||||||| ||||| || || || || ||||| ||||| ||||| | ||||| | | Sbjct 4732 GTATTTAGTTGCTTTGCGTGTGGGGGCGGCTCTACTATGGGATATAAGTTAGCAGGATGT 4673 Query 15019 GACGTTATTGGGATGAATG--AAATCGACCCTAAAATGGCTGATTGCTACATTGAAAACC 15076 || |||| ||| | || | || || || | |||| || || || |||| | Sbjct 4672 -ACTGTATTAGGAA-ACTGCGACATTGATCCACAGATGGTTGCTTTATATCAAAAAAATC 4615 Query 15077 ATAATCCTAAATACTCTTATGTTGAAGATATACGAACTTTTAAAGATAGAACA------G 15130 |||| ||||| || || ||| | |||||| | |||||||||| || | Sbjct 4614 ATAAGCCTAAGTATTCCTATTGTATGGATATAAGGGAGTTTAAAGATATTCCAAGTGAAG 4555 Query 15131 ACCTACCCAAAGAACTTTATGATTTAGATATTTTGGATGGCTCTCCTCCTTG--CAGTAG 15188 | |||| |||| | | |||| | |||||||| ||||| || || || || || | Sbjct 4554 AGTTACCAGGAGAATTATTTGATCTTGATATTTTAGATGGTTCGCCACCATGTTCATCAT 4495 Query 15189 TTTTAGTATGGCTGGAAATCGTGAAAAAGATTGGGGAAAAGAAAAGAAG---TTTAGAGA 15245 ||| || || ||| | ||| ||| ||||| | |||||| || |||| Sbjct 4494 TTTC--TACTGCAGGAGTAAGAGAAGAAGCGTGGGGT---GTGAAGAAGGCATTCCGAGA 4440 Query 15246 AGGACAAGCCGACCAGGTGTTAGATACTTTGTTCTTTGATTTTATAGAACTTGCTGAAAA 15305 ||||||||| | || || ||||| || |||||||| || || | | | | ||||| Sbjct 4439 AGGACAAGCAAAGCAAGTACTAGATGAGTTATTCTTTGAATTCATTGCAGTAGGCGAAAA 4380 Query 15306 GCTACAGCCAAAAATAGTAATTGCTGAAAATGTGAAAGGTATTTTAATGGGTGATGCGAA 15365 || | || || | | |||||||||||||||| || || | || ||| | || | Sbjct 4379 ACTTAAACCTAAGGTTATTATTGCTGAAAATGTGACTGGAATGGTTATAGGTAAAGCTAG 4320 Query 15366 AGATTATGTTAGAAAAATATTGTCAGATTTTGACAAAGCCGGATATGTTGTACAGGAATT 15425 || ||||| | | || || | || |||| | | |||||||| ||| ||| || Sbjct 4319 AGGATATGTAAAAGAAGTAATTCAAGGTTTTAAAGATATCGGATATGATGTGCAGCTGTT 4260 Query 15426 TTGTTTAGATGCAAGTAGAATGGGAATACCACAAAAAAGGGAACGAGTTTTCTTTATAGC 15485 | || ||||| | |||||| | || |||| |||||||||||| || ||| | || Sbjct 4259 TAAATTGAATGCAGCAACAATGGGTGTTCCTCAAAGAAGGGAACGAGTATTTTTTGTTGC 4200 Query 15486 AATTAGAAAGGATTT 15500 ||||| ||||| Sbjct 4199 TCGTAGAACAGATTT 4185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 228269136752348