Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq129 116 3e-21 seq121 113 4e-20 seq27 111 1e-19 seq88 91.5 1e-13 seq474 89.7 5e-13 seq184 89.7 5e-13 seq241 87.8 2e-12 >seq129 Length=753513 Score = 116 bits (128), Expect = 3e-21 Identities = 152/209 (73%), Gaps = 1/209 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| ||| | || || || || || || || || || || ||||| || | | Sbjct 556227 GATGCAGATATTTGTGAAGACCCTCACTGGGAAGACCATCACTCTGGAAGTGGAGAGCTC 556168 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || |||||||||||||||||||| || ||||| ||||| Sbjct 556167 AGACACCATCGATAATGTCAAGGCCAAGATCCAAGACAAAGAAGGGATCCCTCCTGATCA 556108 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | | || ||||| ||||| ||||| |||||| | | | | || |||| ||||| Sbjct 556107 GCAGAGGCTCATTTTTGCTGGGAAGCAGCTTGAGGATGGGCGTACCCTGGCAGACTATAA 556048 Query 24883 CATTCAAAAGGAATCGACACTACA-CTTG 24910 ||| || |||||||| || || || |||| Sbjct 556047 CATCCAGAAGGAATCCACTCTCCATCTTG 556019 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || || || || || || || || || ||||| || | || Sbjct 556454 ATGCAGATCTTTGTGAAGACCCTCACTGGCAAGACCATCACTCTGGAAGTTGAGAGCTCC 556395 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| || ||||| || || || || || ||||| Sbjct 556394 GACACGATTGATAATGTGAAGGCTAAGATTCAGGACAAGGAGGGCATTCCCCCGGATCAG 556335 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | | |||||||| || ||||||||||||||| | | | || | || |||||| Sbjct 556334 CAGAGGCTCATCTTTGCTGGTAAACAGCTGGAGGATGGGCGCACGCTGGCGGACTATAAC 556275 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 ||||||||||| || || || || ||||| Sbjct 556274 ATTCAAAAGGAGTCTACTCTTCATTTGGT 556246 >seq121 Length=770561 Score = 113 bits (124), Expect = 4e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||||||| | || || || ||||| || || || || || || || || | | Sbjct 403670 GATGCAGATCTTTGTGAAGACCCTCACCGGCAAGACAATCACCCTTGAGGTTGAGAGCTC 403611 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || ||| ||||| || || ||||| || || || || ||||| Sbjct 403610 AGACACCATTGATAACGTGAAAGCTAAGATTCAGGATAAAGAGGGGATCCCACCTGATCA 403551 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || || |||||||||| ||||| |||||||| ||| | | | || |||| || || Sbjct 403550 GCAGCGCCTGATCTTTGCTGGGAAGCAGCTGGACGATGGCCGCACCCTGGCAGACTACAA 403491 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGT 24912 ||| |||||||| || || || ||| |||| Sbjct 403490 CATCCAAAAGGAGTCCACGCTGCACCTGGT 403461 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || | || || || || || || | || || || | || Sbjct 403213 ATGCAGATCTTTGTAAAGACTTTGACGGGGAAGACGATCACTTTGGAGGTGGAGAGCTCC 403154 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||| || || || |||||||| || ||||| Sbjct 403153 GACACCATCGATAATGTCAAGGCAAAGATTCAGGATAAGGAAGGAATCTCTGTGGATCAG 403094 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | |||||||| || || ||||| || ||| | | | || ||||||| ||| Sbjct 403093 CAGCGTCTTATCTTTGCTGGAAAGCAGCTCGAAGATGCACGCACGCTGGCAGATTACAAC 403034 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 ||||| |||||||| || || ||| ||||| |||| || | || ||| Sbjct 403033 ATTCAGAAGGAATCCACCCTTCACCTGGTGCTGCGGCTGAGGGGTGGC 402986 Score = 89.7 bits (98), Expect = 5e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || || || || || || ||||| | || || || | Sbjct 402985 ATGCAGATCTTTGTGAAGACTCTTACAGGGAAGACCATTACTTTGGAGGTGGAGAGTTCT 402926 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||| || ||||| || || ||| | || ||||| Sbjct 402925 GACACTATCGATAATGTGAAGGCAAAGATTCAGGACAAGGAGGGCATATCCCCGGATCAG 402866 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || | || ||||| ||||| |||||||||||| | | | ||||||| ||| Sbjct 402865 CAGCGCCTCATTTTTGCTGGGAAGCAGCTGGAGGATGGTTGCACTCTTGCAGATTACAAC 402806 Query 24884 ATTCAAAAGGAATCGACACTACAC 24907 ||||| || ||||| || || ||| Sbjct 402805 ATTCAGAAAGAATCCACCCTTCAC 402782 Score = 82.4 bits (90), Expect = 7e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || || || || || || || || | | Sbjct 403441 ATGCAGATCTTCGTCAAGACCCTTACAGGGAAGACCATCACTCTTGAGGTTGAGAGCTCA 403382 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || ||| |||||||| ||||| || || || | || || || Sbjct 403381 GACACCATTGAGAATGTGAAAGCCAAGATCCAGGACAAGGAGGGCATCGCACCTGACCAG 403322 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || |||| ||||| || || ||||| |||||| | | | ||||||| ||| Sbjct 403321 CAGCGCCTGATTTTTGCTGGAAAGCAGCTCGAGGATGGCCGCACATTAGCAGATTACAAC 403262 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATT 24921 || || ||||| || || || ||| |||| | ||||| Sbjct 403261 ATACAGAAGGAGTCCACTCTCCACCTGGTCCTCCGATT 403224 >seq27 Length=1763170 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||||||| | ||||| || || || || || || || || || || || | | Sbjct 581351 GATGCAGATCTTTGTCAAAACCCTCACTGGGAAGACCATCACCCTTGAGGTCGAGAGCTC 581410 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | || | || || || || || ||||| || || || ||||| || || Sbjct 581411 GGATACGATTGACAATGTGAAGGCCAAAATTCAGGACAAGGAGGGTATTCCTCCAGACCA 581470 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || |||||||||||||| || || |||||||||||| | | | || | ||||| || Sbjct 581471 GCAGCGTTTGATCTTTGCTGGTAAGCAGCTGGAGGATGGCCGCACCCTGGCGGATTACAA 581530 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 |||||| |||||||| || || || ||||| | || | || || ||| Sbjct 581531 CATTCAGAAGGAATCCACTCTTCATCTGGTGCTCCGCCTCCGTGGTGGC 581579 Score = 96.9 bits (106), Expect = 3e-15 Identities = 146/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | || || || ||||| || || || || || || || || || | Sbjct 580896 GATGCAGATCTTCGTCAAGACTCTCACCGGCAAGACCATCACCCTTGAGGTGGAGTCCTC 580955 Query 24763 CGACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821 ||| || | || |||| ||| | |||||| |||||||| || || || || || || | Sbjct 580956 CGATACCATCGACAACGTTAAGGC-AAAGATTCAAGACAAGGAGGGCATCCCCCCAGACC 581014 Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881 | || ||| ||||||||||||| || ||||| ||||| | | | | | || || | Sbjct 581015 AGCAGCGTCTGATCTTTGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTTGCCGACTACA 581074 Query 24882 ACATTCAAAAGGAATCGACACTACA 24906 | || || |||||||| || || || Sbjct 581075 ATATCCAGAAGGAATCCACCCTCCA 581099 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || ||||| || || ||||| || || || || | || Sbjct 581124 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATTACCCTGGAGGTCGAGAGCTCC 581183 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| || || || ||||| || || || || Sbjct 581184 GACACCATCGACAATGTCAAGGCTAAGATCCAGGATAAGGAGGGAATTCCCCCAGACCAG 581243 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | ||||||| ||||| || || || |||||| | | | | | || || ||| Sbjct 581244 CAGAGGCTGATCTTCGCCGGCAAGCAACTCGAGGATGGCCGCACCTTAGCGGACTACAAC 581303 Query 24884 ATTCAAAAGGAATCGACACTACA 24906 || ||||||||||| || || || Sbjct 581304 ATCCAAAAGGAATCTACGCTCCA 581326 >seq88 Length=981168 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||||||| | || || || ||||| || || || || ||||| || || | | Sbjct 85229 GATGCAGATCTTTGTCAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCTTC 85170 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || |||||||| ||||| || || || || || ||||| Sbjct 85169 GGACACGATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCGCCGGATCA 85110 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || || | ||||| ||||| || ||||| ||||| | | | | | || || || Sbjct 85109 GCAGCGCCTCATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGCACCCTCGCCGACTACAA 85050 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCG 24932 ||| || ||||| || || || ||| | || | || | ||||| |||| Sbjct 85049 CATCCAGAAGGAGTCCACCCTCCACCTCGTCCTCCGCCTCCGCGGCGGCG 85000 >seq474 Length=218880 Score = 89.7 bits (98), Expect = 5e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || ||||| || ||||| || || || || Sbjct 25301 ATGCAGATCTTCGTGAAGACCCTGACGGGGAAGACTATCACCCTCGAGGTGGAGTCCTCC 25242 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || || || || || Sbjct 25241 GACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCGCCAGACCAG 25182 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || | ||||| ||||| || ||||| ||||| | | | | | ||||| ||| Sbjct 25181 CAGCGCCTCATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGCACCCTCGCCGATTACAAC 25122 Query 24884 ATTCAAAAGGAATCGACACTACAC 24907 || || ||||| || || || ||| Sbjct 25121 ATCCAGAAGGAGTCTACTCTCCAC 25098 >seq184 Length=562535 Score = 89.7 bits (98), Expect = 5e-13 Identities = 114/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| ||| | || || || ||| | ||||| || || |||||||| ||| | Sbjct 77560 GATGCAGATTTTTGTCAAGACCCTCACCAGCAAAACCATAACCCTCGAAGTTGAAAGTTC 77619 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||||| | || | || || || ||||||||||| || || || ||||| || || Sbjct 77620 CGACACAATTGATAATGTCAAGGCTAATATCCAAGACAAGGAGGGCATCCCTCCTGACCA 77679 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT 24859 | | | | |||||||| ||||| ||||||| ||| Sbjct 77680 GCTGCATCTCATCTTTGCTGGGAAGTAGCTGGAAGAT 77716 Score = 89.7 bits (98), Expect = 5e-13 Identities = 100/131 (76%), Gaps = 2/131 (2%) Strand=Plus/Plus Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847 ||||| || ||||| || || || || || ||||| |||||| | || ||| | ||||| Sbjct 77812 AAGATTCAGGACAAGGAGGGGATCCCACCTGATCAGCAACGTCTCATATTTTCTGGGAAG 77871 Query 24848 CAGCTGGAGGATTCGAGAAACA-TGTCAGATTATAACATTCAAAAGGAATCGACACTACA 24906 ||||| |||||| | | ||| | ||||||| |||||||||||||||||||| || | Sbjct 77872 CAGCTCGAGGATAGGC-ATACACTAGCAGATTACAACATTCAAAAGGAATCGACCCTTTA 77930 Query 24907 CTTGGTGTTGC 24917 | | || |||| Sbjct 77931 CCTTGTCTTGC 77941 >seq241 Length=450715 Score = 87.8 bits (96), Expect = 2e-12 Identities = 113/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | || || || ||||| || || ||||| || || || || || | Sbjct 239240 GATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACCATTACCCTGGAGGTCGAGTCCTC 239299 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | || | || || |||||||||||||| || || || || || || || Sbjct 239300 GGATACGATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAGGGCATCCCCCCGGACCA 239359 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGA 24858 |||||| | ||||| ||||| || ||||| ||||| Sbjct 239360 GCAACGTCTTATCTTCGCCGGCAAGCAGCTCGAGGA 239395 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449445919680760