Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq680 102 7e-17 seq1029 89.7 4e-13 seq129 87.8 1e-12 seq121 86.0 5e-12 >seq680 Length=135211 Score = 102 bits (112), Expect = 7e-17 Identities = 106/139 (76%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 110366 GACAAAGAAGGCGTGCCCGTGGATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAG 110425 ||||| || || | ||| |||||||||||| | |||| || || || ||| ||||| Sbjct 22490 GACAAGGAGGGTATACCCCCAGATCAACAAAGATTGATTTTCGCTGGAAAGCAGTTGGAG 22549 Query 110426 GATGCCAGAACAATGGCGGATTACAACATTCAAAAAGAATCTACGTTGCACATGGTGTTA 110485 |||| |||| |||| |||||||||||||||||||| || ||| |||| |||| ||| Sbjct 22550 GATGGTCGAACCTTGGCTGATTACAACATTCAAAAAGAGTCAACGCTGCATCTGGTTTTA 22609 Query 110486 AGACTGCGAGGGGGAAAAA 110504 ||||| | || |||| || Sbjct 22610 AGACTTAGGGGTGGAACAA 22628 >seq1029 Length=71094 Score = 89.7 bits (98), Expect = 4e-13 Identities = 103/139 (74%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 110366 GACAAAGAAGGCGTGCCCGTGGATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAG 110425 ||||| || || | ||| |||||||||||| | |||| ||| || || ||| |||| Sbjct 12380 GACAAGGAGGGTATACCCCCAGATCAACAAAGATTGATTTTTGCTGGAAAGCAGTTGGAA 12321 Query 110426 GATGCCAGAACAATGGCGGATTACAACATTCAAAAAGAATCTACGTTGCACATGGTGTTA 110485 |||| |||| | || |||||||||||||||||||| || || |||| |||| ||| Sbjct 12320 GATGGTCGAACCCTAGCTGATTACAACATTCAAAAAGAGTCAACACTGCATCTGGTTTTA 12261 Query 110486 AGACTGCGAGGGGGAAAAA 110504 || || | || |||| || Sbjct 12260 AGGCTTAGGGGTGGAACAA 12242 >seq129 Length=753513 Score = 87.8 bits (96), Expect = 1e-12 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 110357 AAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAACAAAGACTTATTTATGCGGGTAAA 110416 |||||| ||||| || ||| | ||| |||||| || || || || | ||| |||||| Sbjct 556370 AAGATTCAGGACAAGGAGGGCATTCCCCCGGATCAGCAGAGGCTCATCTTTGCTGGTAAA 556311 Query 110417 CAGCTGGAGGATGCCAGAACAATGGCGGATTACAACATTCAAAAAGAATCTAC 110469 ||||||||||||| | || ||||||| || ||||||||||| || ||||| Sbjct 556310 CAGCTGGAGGATGGGCGCACGCTGGCGGACTATAACATTCAAAAGGAGTCTAC 556258 >seq121 Length=770561 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || ||||| || ||| | || || || |||||||| | || |||| | Sbjct 402985 ATGCAGATCTTTGTGAAGACTCTTACAGGGAAGACCATTACTTTGGAGGTGGAGAGTTCT 402926 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || ||| ||| | || || |||||| ||||| || ||| | || |||||| Sbjct 402925 GACACTATCGATAATGTGAAGGCAAAGATTCAGGACAAGGAGGGCATATCCCCGGATCAG 402866 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || | || |||| ||| || || ||||||||||||| | || | || ||||||||| Sbjct 402865 CAGCGCCTCATTTTTGCTGGGAAGCAGCTGGAGGATGGTTGCACTCTTGCAGATTACAAC 402806 Query 110453 ATTCAAAAAGAATCTAC 110469 ||||| |||||||| || Sbjct 402805 ATTCAGAAAGAATCCAC 402789 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412437484452281