Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq129 98.7 8e-16 seq121 86.0 5e-12 >seq129 Length=753513 Score = 98.7 bits (108), Expect = 8e-16 Identities = 142/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614 ||||| || ||||| || || | || ||||| ||||| || | ||| ||| ||| Sbjct 556454 ATGCAGATCTTTGTGAAGACCCTCACTGGCAAGACCATCACTCTGGAAGTTGAGAGCTC- 556396 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 ||| || | | | || || |||||| || || || ||| | ||| |||||| Sbjct 556395 CGACACGATTGATAATGTGAAGGCTAAGATTCAGGACAAGGAGGGCATTCCCCCGGATCA 556336 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||||| || || | ||| ||||||||||||||||| | || |||||||||| || Sbjct 556335 GCAGAGGCTCATCTTTGCTGGTAAACAGCTGGAGGATGGGCGCACGCTGGCGGACTATAA 556276 Query 107735 CATTCAAAAGGAGTCTAC 107752 |||||||||||||||||| Sbjct 556275 CATTCAAAAGGAGTCTAC 556258 >seq121 Length=770561 Score = 86.0 bits (94), Expect = 5e-12 Identities = 149/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614 ||||| || ||||| || ||||| || || || || || || | || |||| ||| Sbjct 403213 ATGCAGATCTTTGTAAAGACTTTGACGGGGAAGACGATCACTTTGGAGGTGGAGAGCTC- 403155 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 ||| || ||| | || || ||||||| ||||| ||||| | | |||||||| Sbjct 403154 CGACACCATCGATAATGTCAAGGCAAAGATTCAGGATAAGGAAGGAATCTCTGTGGATCA 403095 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||| | ||||| | ||| || || ||||| || || || || |||| || ||||| Sbjct 403094 GCAGCGTCTTATCTTTGCTGGAAAGCAGCTCGAAGATGCACGCACGCTGGCAGATTACAA 403035 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTG 107768 |||||| ||||| || || | ||| ||||| || Sbjct 403034 CATTCAGAAGGAATCCACCCTTCACCTGGTGCTG 403001 Score = 82.4 bits (90), Expect = 6e-11 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 107640 AAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAGCAGAGACTTATTTATGCGGGTAAA 107699 |||||| |||||||| || | || ||||||||| | || || | ||| || || Sbjct 403585 AAGATTCAGGATAAAGAGGGGATCCCACCTGATCAGCAGCGCCTGATCTTTGCTGGGAAG 403526 Query 107700 CAGCTGGAGGACGCCAAAACAATGGCGGACTACAACATTCAAAAGGAGTCTACGTTGCAC 107759 |||||||| || | | || |||| ||||||||||| ||||||||||| ||| ||||| Sbjct 403525 CAGCTGGACGATGGCCGCACCCTGGCAGACTACAACATCCAAAAGGAGTCCACGCTGCAC 403466 Query 107760 ATGGT 107764 |||| Sbjct 403465 CTGGT 403461 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398486354084413