Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq129 143 2e-29 seq27 143 2e-29 seq121 118 8e-22 seq1029 98.7 8e-16 seq680 98.7 8e-16 seq40 91.5 1e-13 seq184 87.8 1e-12 seq88 87.8 1e-12 seq464 86.0 5e-12 >seq129 Length=753513 Score = 143 bits (158), Expect = 2e-29 Identities = 163/216 (75%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || || ||||||||||| || || || |||||||||||||| ||||| | ||||| | Sbjct 556240 CGGAGGACCAAATGAAGAGTAGACTCCTTTTGAATGTTATAGTCCGCCAGCGTGCGCCCA 556299 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || || ||||| |||||| | || | || ||||||||||| ||||| ||||| ||| Sbjct 556300 TCCTCCAGCTGTTTACCAGCAAAGATGAGCCTCTGCTGATCCGGGGGAATGCCCTCCTTG 556359 Query 29692 TCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 || || ||| || | || ||| | || | ||||| || || ||||| ||||| || Sbjct 556360 TCCTG-AATCTTAGCCTTCACATTATCAATCGTGTCGGAGCTCTCAACTTCCAGAGTGAT 556418 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || |||||||| | ||| || ||||| |||||||| Sbjct 556419 GGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCAT 556454 Score = 127 bits (140), Expect = 2e-24 Identities = 153/204 (75%), Gaps = 3/204 (1%) Strand=Plus/Plus Query 29584 TGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGT 29643 |||||||| || ||||| || ||||| ||||| || | ||||| ||| || |||||| Sbjct 556480 TGAAGCGTTGACTCTTTCTGGATGTTGTAATCAGCCAAAGTGCGGCCATCCTCAAGTTGT 556539 Query 29644 TTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTT 29703 ||||||||| | || | || ||||| ||||| ||||| ||||| |||||||| ||| || Sbjct 556540 TTGCCAGCAAAGATGAGCCTCTGCTGGTCCGGGGGAATGCCCTCCTTGTCTTG-AATCTT 556598 Query 29704 TG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGT 29762 | || ||| | || | ||||| || || ||||| || || || || |||||||| Sbjct 556599 AGCCTTCACATTATCAATCGTGTC-GAGCTCTCAACTTCCAGGGTGATGGTCTTGCCAGT 556657 Query 29763 TAAGGTTTTAACAAATATCTGCAT 29786 | ||| || ||||| |||||||| Sbjct 556658 AAGGGTCTTCACAAAGATCTGCAT 556681 Score = 123 bits (136), Expect = 2e-23 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 |||||| || | ||| || |||||||| || || |||||||| || || | ||| || Sbjct 556011 ACGCAGGACAAGATGGAGAGTGGATTCCTTCTGGATGTTATAGTCTGCCAGGGTACGCCC 556070 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || || || |||||| | || | || |||||||| || || || || ||||| Sbjct 556071 ATCCTCAAGCTGCTTCCCAGCAAAAATGAGCCTCTGCTGATCAGGAGGGATCCCTTCTTT 556130 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 |||||| | || |||||| | || | ||||| || || ||||| ||||| || Sbjct 556131 GTCTTGGATCTTGGCCTTGACATTATCGATGGTGTCTGAGCTCTCCACTTCCAGAGTGAT 556190 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || ||||| | ||| || |||||||||||||| Sbjct 556191 GGTCTTCCCAGTGAGGGTCTTCACAAATATCTGCAT 556226 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || ||||| | ||||| || | ||||| || || ||||| || || || || || || Sbjct 556683 CCACCCCTGAGCCGCAGGACAAGGTGAAGAGTTGACTCTTTCTGGATATTGTAGTCAGCT 556742 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | |||||| ||| || ||||||||||| ||| |||| | || ||||| || || ||| Sbjct 556743 AAAGTGCGACCATCCTCAAGTTGTTTGCCGGCAAATATGAGCCTCTGCTGGTCAGGGGGA 556802 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || ||||| || || || | ||| || ||| | || | ||||| || || ||| Sbjct 556803 ATGCCCTCCTTATCCTGGATTTTGGCCTTAACATTATCAATTGTGTCCGAGCTCTCAACT 556862 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| || || || ||||| || | || |||||||| |||||||| Sbjct 556863 TCAAGGGTGATGGTCTTGCCTGTGAGAGTCTTAACAAAGATCTGCAT 556909 >seq27 Length=1763170 Score = 143 bits (158), Expect = 2e-29 Identities = 163/216 (75%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || ||||||| |||||| |||||||| || |||||||| |||||||| | |||||| | Sbjct 581566 CGGAGCACCAGATGAAGAGTGGATTCCTTCTGAATGTTGTAATCCGCCAGGGTGCGGCCA 581507 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || || || || |||||| | ||||| | ||||| || || ||||||||||| ||| Sbjct 581506 TCCTCCAGCTGCTTACCAGCAAAGATCAAACGCTGCTGGTCTGGAGGAATACCCTCCTTG 581447 Query 29692 TCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 || || |||||| | || ||| | || | || || || || || ||||| || || Sbjct 581446 TCCTG-AATTTTGGCCTTCACATTGTCAATCGTATCCGAGCTCTCGACCTCAAGGGTGAT 581388 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || ||||| | |||||| ||||| |||||||| Sbjct 581387 GGTCTTCCCAGTGAGGGTTTTGACAAAGATCTGCAT 581352 >seq121 Length=770561 Score = 118 bits (130), Expect = 8e-22 Identities = 158/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || || | ||||| ||||||||||| |||||||| ||||| |||| |||| | Sbjct 402770 ACGAAGGACAAGGTGAAGGGTGGATTCTTTCTGAATGTTGTAATCTGCAAGAGTGCAACC 402829 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || || || |||||| | || | | ||||||||||| | || ||||| || Sbjct 402830 ATCCTCCAGCTGCTTCCCAGCAAAAATGAGGCGCTGCTGATCCGGGGATATGCCCTCCTT 402889 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 ||| || ||| |||| || ||| | || | |||||||||| || || || | ||| | Sbjct 402890 GTCCTG-AATCTTTGCCTTCACATTATCGATAGTGTCAGAACTCTCCACCTCCAAAGTAA 402948 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | || || || || | || || ||||| |||||||| Sbjct 402949 TGGTCTTCCCTGTAAGAGTCTTCACAAAGATCTGCAT 402985 >seq1029 Length=71094 Score = 98.7 bits (108), Expect = 8e-16 Identities = 112/149 (75%), Gaps = 1/149 (1%) Strand=Plus/Plus Query 29549 TTTATCGTTGT-CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATG 29607 || ||| |||| || ||||| | | | |||| ||| || || || |||||||||||| Sbjct 12235 TTGATCATTGTTCCACCCCTAAGCCTTAAAACCAGATGCAGTGTTGACTCTTTTTGAATG 12294 Query 29608 TTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGC 29667 || ||||| || | ||| ||| ||| || | || || |||||| | ||||||||||| Sbjct 12295 TTGTAATCAGCTAGGGTTCGACCATCTTCCAACTGCTTTCCAGCAAAAATCAATCTTTGT 12354 Query 29668 TGATCCGGCGGAATACCCTCTTTGTCTTG 29696 ||||| || || |||||||| ||||| || Sbjct 12355 TGATCTGGGGGTATACCCTCCTTGTCCTG 12383 >seq680 Length=135211 Score = 98.7 bits (108), Expect = 8e-16 Identities = 112/149 (75%), Gaps = 1/149 (1%) Strand=Plus/Minus Query 29549 TTTATCGTTGT-CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATG 29607 || ||| |||| || ||||| | | | |||| ||| ||||| || |||||||||||| Sbjct 22635 TTAATCATTGTTCCACCCCTAAGTCTTAAAACCAGATGCAGCGTTGACTCTTTTTGAATG 22576 Query 29608 TTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGC 29667 || ||||| || | ||| ||| ||| || | || || ||||| | ||||||||||| Sbjct 22575 TTGTAATCAGCCAAGGTTCGACCATCCTCCAACTGCTTTCCAGCGAAAATCAATCTTTGT 22516 Query 29668 TGATCCGGCGGAATACCCTCTTTGTCTTG 29696 ||||| || || |||||||| ||||| || Sbjct 22515 TGATCTGGGGGTATACCCTCCTTGTCCTG 22487 >seq40 Length=1536145 Score = 91.5 bits (100), Expect = 1e-13 Identities = 112/152 (74%), Gaps = 1/152 (1%) Strand=Plus/Minus Query 29549 TTTATCGTTGT-CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATG 29607 || ||| |||| || ||||| | | || |||| ||||| || || ||||||||||| Sbjct 682268 TTAATCATTGTTCCACCCCTAAGCCTCAAAACCAGGTGAAGAGTCGACTCTTTTTGAATA 682209 Query 29608 TTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGC 29667 || ||||| || | || ||| ||| || | ||||| |||||| | |||| |||||| Sbjct 682208 TTGTAATCAGCTAGAGTTCGACCATCTTCCAACTGTTTCCCAGCAAAAATCAGCCTTTGC 682149 Query 29668 TGATCCGGCGGAATACCCTCTTTGTCTTGTAA 29699 ||||| || || || ||||| ||||| || || Sbjct 682148 TGATCTGGGGGTATCCCCTCCTTGTCCTGCAA 682117 >seq184 Length=562535 Score = 87.8 bits (96), Expect = 1e-12 Identities = 130/180 (72%), Gaps = 6/180 (3%) Strand=Plus/Minus Query 29586 AAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTT 29645 ||| || ||||| ||||||||||| ||||| || | || | ||| ||||| || || Sbjct 77928 AAGGGTCGATTCCTTTTGAATGTTGTAATCTGCTAGTGTATGCCTATCCTCGAGCTGCTT 77869 Query 29646 GCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTG 29705 |||| | |||| | | ||||||||| || || || ||||| ||||| || ||| || | Sbjct 77868 CCCAGAAAATATGAGACGTTGCTGATCAGGTGGGATCCCCTCCTTGTCCTG-AATCTTGG 77810 Query 29706 -TTTGACAGTTTCTACAGTGTCAGAAAGTTCT--ACTTCAAGAGTTATAGTTTTGCCAGT 29762 ||| ||| | || | ||||| ||| ||| || |||||||| || || || ||||| Sbjct 77809 CTTTCACATTGTCGATCGTGTC--CAAGCTCTCAACCTCAAGAGTGATGGTCTTTCCAGT 77752 >seq88 Length=981168 Score = 87.8 bits (96), Expect = 1e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 29584 TGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGT 29643 || || ||||| || || || ||||| || || || | |||||| || ||||| || Sbjct 85026 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGC 85085 Query 29644 TTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTT 29703 || || || | || | | |||||||||||||| || ||||| ||||| || | || Sbjct 85086 TTTCCGGCGAAGATGAGGCGCTGCTGATCCGGCGGGATGCCCTCCTTGTCCTGGATCTTG 85145 Query 29704 TGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTT 29763 ||||| | || | ||||| ||| || || || || || || || ||||| || Sbjct 85146 GCCTTGACGTTGTCGATCGTGTCCGAAGACTCGACCTCGAGGGTGATGGTCTTGCCGGTG 85205 Query 29764 AAGGTTTTAACAAATATCTGCATTTT 29789 | ||| || ||||| |||||||| || Sbjct 85206 AGGGTCTTGACAAAGATCTGCATCTT 85231 >seq464 Length=225985 Score = 86.0 bits (94), Expect = 5e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || ||||||| ||| || ||||| || || ||||| || || || || | || | Sbjct 137606 CGGAGCACCAGATGGAGGGTGGACTCCTTCTGAATATTGTAGTCGGCGAGCGTCCTGCCG 137665 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || || || || || || | |||| || ||||| ||||||||||| ||||| ||| Sbjct 137666 TCCTCAAGCTGCTTCCCGGCGAAGATCAGCCTCTGCTGGTCCGGCGGAATCCCCTCCTTG 137725 Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751 || || | || || ||| | || | || || ||| || ||||| || || || Sbjct 137726 TCCTGGATCTTCGCCTTCACATTATCAATGGTATCCGAACTCTCCACTTCGAGGGTGATC 137785 Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || | ||| || |||||||| ||||| Sbjct 137786 GTCTTTCCCGTAAGGGTCTTCACAAATATTTGCAT 137820 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 384842123009697